| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,501,774 | C→A | 5.3% | intergenic (+50/+22) | mdeA → / ← PP_1309 | methionine gamma‑lyase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,501,774 | 0 | C | A | 5.3% | 835.9 / 25.4 | 246 | intergenic (+50/+22) | mdeA/PP_1309 | methionine gamma‑lyase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (132/101); new base A (9/4); total (141/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
TCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGTGC > NC_002947/1501625‑1501921 | tCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGc > 2:5446788/1‑150 (MQ=255) cGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAg < 1:3861899/150‑1 (MQ=255) ggATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGc < 1:662109/150‑1 (MQ=255) gATATCGGAGGGGTTGGTGCTTCTGTCGGTGGGGGTGGAGGATGTGGAGGACCTGCTGGGAGATGTCGAAGAGGGATTGCAGGCGTGGTGTTAGGTTGCCCGCGAAGAGGCGATTGAATCCAGCCGACTATAATGGCCTCTTGCGAgggg > 2:3187159/1‑148 (MQ=255) atCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGATCAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCttt < 1:1167950/150‑1 (MQ=255) atCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCttt < 1:2515810/150‑1 (MQ=255) tCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCGCAAGAGGCCtttt < 2:3349906/150‑2 (MQ=255) tCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCAATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTg < 2:3917956/150‑1 (MQ=255) ggAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTc < 2:2188285/150‑1 (MQ=255) ggAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCGCAAGAGGCCtttttt < 2:2032873/150‑4 (MQ=255) gAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTca > 2:4148605/1‑150 (MQ=255) gAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTca < 2:3712224/150‑1 (MQ=255) aGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCGCAAGAGGCCttttttgt < 2:3598340/150‑6 (MQ=255) gTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACTGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTc > 2:179798/1‑150 (MQ=255) gTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTc > 1:2594197/1‑150 (MQ=255) gTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTc < 2:2527185/150‑1 (MQ=255) ttGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCa > 1:1500866/1‑150 (MQ=255) gggCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGAt > 1:3791608/3‑150 (MQ=255) gTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGAt > 1:4573885/1‑150 (MQ=255) cGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCaa < 1:2084088/150‑1 (MQ=255) tCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACg > 2:1113810/1‑150 (MQ=255) tGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGACCACAAAAAAGGCATCTTGCGAGGCCTTTGTCACATTCAGATAAACGCt > 1:5226043/1‑150 (MQ=255) gTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGc > 2:4274337/1‑120 (MQ=255) gTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGc < 1:4274337/120‑1 (MQ=255) cGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGa < 1:3513346/150‑1 (MQ=255) cGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGa > 1:1612957/1‑150 (MQ=255) gggCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCg < 1:3286464/150‑1 (MQ=255) aggaTGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCttt > 1:4430042/1‑150 (MQ=255) gaTGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTtcg > 1:2984503/1‑150 (MQ=255) tgtgGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGTGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTtcgtc < 2:1816036/150‑1 (MQ=255) tgGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGa < 1:1043539/150‑1 (MQ=255) tgGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGa < 2:3260630/150‑1 (MQ=255) gaggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGc > 1:3689678/1‑150 (MQ=255) gaggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGc > 2:1289793/1‑150 (MQ=255) aggaCCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCa > 1:4357377/1‑150 (MQ=255) ctgGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGc < 1:3394118/150‑1 (MQ=255) ctgGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGc < 1:5203557/150‑1 (MQ=255) tgGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGa > 2:1272259/1‑120 (MQ=255) tgGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCg > 1:5109260/1‑150 (MQ=255) gATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTa < 2:1089926/150‑1 (MQ=255) gTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGgc > 2:622537/1‑150 (MQ=255) tCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGgcg > 1:2652417/1‑150 (MQ=255) gAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCt > 1:1201758/1‑150 (MQ=255) gCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGt > 2:4750478/1‑150 (MQ=255) gCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGt > 2:4287597/1‑150 (MQ=255) ttGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCa < 2:4794362/150‑1 (MQ=255) gCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATa > 2:3613932/1‑150 (MQ=255) cAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAg > 2:521346/1‑150 (MQ=255) aGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGt > 1:1908856/1‑150 (MQ=255) aGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGt > 2:355249/1‑150 (MQ=255) aGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGt > 1:4163338/1‑150 (MQ=255) ctgctgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTcgcg > 1:5539823/1‑150 (MQ=255) tgctgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGa < 1:4779208/91‑1 (MQ=255) tgctgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTcgcgc > 2:5011627/1‑150 (MQ=255) gctgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTcgcgcg > 2:2905497/1‑150 (MQ=255) tgTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGc > 1:848856/1‑150 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAAc < 2:4696648/81‑1 (MQ=255) gTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCa > 1:1433367/1‑150 (MQ=255) ttAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCAc > 1:5132676/1‑150 (MQ=255) ttAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCAc > 1:5446815/1‑150 (MQ=255) ttAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCAc > 2:4500594/1‑150 (MQ=255) aGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACtt > 1:5518499/1‑150 (MQ=255) tGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTcggc < 2:3757979/150‑1 (MQ=255) cccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTcggcgg > 1:3626913/1‑150 (MQ=255) ccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgt > 2:5353733/1‑150 (MQ=255) ccGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGgt < 2:3471722/150‑1 (MQ=255) cgAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTc < 1:5364330/150‑1 (MQ=255) agagGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCttt < 1:2905497/150‑1 (MQ=255) gCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAggg > 2:2488601/1‑149 (MQ=255) aTTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTggg > 1:2305533/1‑150 (MQ=255) ttGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTgggg > 1:2204788/1‑150 (MQ=255) ttGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTgggg > 2:1729942/1‑150 (MQ=255) tGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGt < 1:1302963/150‑1 (MQ=255) aaTCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAg < 1:4947507/96‑1 (MQ=255) tCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAgg > 1:3513042/1‑150 (MQ=255) ccAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGc < 2:1418166/150‑1 (MQ=255) cAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCg > 2:451917/1‑150 (MQ=255) aGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCgg > 1:2427599/1‑150 (MQ=255) aGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCgg < 1:1113810/150‑1 (MQ=255) ccACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCa > 1:1568000/1‑150 (MQ=255) cacaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAc > 2:4847680/1‑150 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAgg < 2:2744081/87‑1 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCagt > 2:569490/1‑148 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAcg < 1:3479196/150‑1 (MQ=255) acaAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAcg > 1:4115552/1‑150 (MQ=255) gacaaaGGCCTCGCAAGAGGCCTTTTTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAcgcg > 1:5158363/4‑150 (MQ=255) aaaaaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCAcgcg > 1:80010/1‑150 (MQ=255) aaaaaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCGTTAGGTGGGGTCAGGCGGTCAcgcg > 2:1993593/1‑150 (MQ=255) caaaGGCCTCGCAAGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCggg > 2:3697414/2‑150 (MQ=255) aaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc < 1:179798/150‑1 (MQ=255) aaaGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc > 2:717570/1‑150 (MQ=255) aaaGGCCTCGCAAGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGc > 2:2261717/1‑150 (MQ=255) gCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTg > 1:970151/1‑150 (MQ=255) gCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTg > 1:611191/1‑150 (MQ=255) ctctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCg < 2:3541625/150‑1 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg > 2:383500/1‑150 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg > 2:2956234/1‑150 (MQ=255) tctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCgg < 1:4287597/150‑1 (MQ=255) ctTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGt < 2:2652417/150‑1 (MQ=255) tGCGAGGACTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTAGAGCATGCCAGGCGAGTTAGGCGATTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGTGc < 1:3187159/150‑1 (MQ=255) | TCACGGGATATCGGAGGGGTTGGTGCGTCTGTCGGTGGGGCTGGAGGATGTGGAGGACCTGCTGGCAGATGTCGAACAGGCATTGCAGGCCTGCTGTTAGGTTGCCCGCGAAGAGGCCATTGAATCCAGCCCACAAAAAAGGCCTCTTGCGAGGCCTTTGTCACATTCAGATCAACGCTTGAGCCCGTAGCTTTCGTCGAGCATGCCCGGCGAGTTAGGCGCTTTCGGTGCATAGTCGCGCGGCACTTCGGCGGTGTCTTTAGGTGGGGTCAGGCGGTCACGCGGGCCTTGCGGTGC > NC_002947/1501625‑1501921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |