| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,513,038 | A→C | 5.8% | intergenic (+19/+43) | sspB → / ← PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,513,038 | 0 | A | C | 5.8% | 651.5 / 19.2 | 190 | intergenic (+19/+43) | sspB/PP_1322 | ClpXP protease specificity‑enhancing factor/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (96/82); new base C (3/9); total (99/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 197 total aligned reads displayed.
TGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGG > NC_002947/1512889‑1513186 | ccGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggatggat > 1:3460814/1‑150 (MQ=255) cGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATc < 2:1902354/150‑1 (MQ=255) cTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGCTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGcc < 1:2965652/150‑1 (MQ=255) ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt > 1:1512756/1‑150 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt‑t < 1:451161/150‑1 (MQ=255) tCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCt‑t < 1:1925718/150‑1 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt‑ttt < 2:5398207/150‑1 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt‑ttt > 2:2784859/1‑150 (MQ=255) gatggatgGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCt‑ttt < 2:4431199/150‑1 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt‑ttttt < 1:4779257/150‑1 (MQ=255) tggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCt‑ttttt < 1:571131/150‑1 (MQ=255) ggatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCGGATGGATCGCCt‑t < 1:2559468/144‑1 (MQ=255) gatggCGACGAGCTGGAAGACGATGATGTGCAACCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑ATtttgt < 2:2501697/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTtttgttt < 1:3698409/150‑1 (MQ=255) tggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAAC‑AAAAAAGGCGATCCATCCGGATCGCCTATTtttgtta < 1:5136066/150‑2 (MQ=38) cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGc < 1:430987/150‑1 (MQ=255) gaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGt > 2:3553891/1‑150 (MQ=255) aGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCaa > 1:1404295/1‑150 (MQ=255) gACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAAt > 2:1055744/1‑150 (MQ=255) cGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCa < 2:4564435/150‑1 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCAc > 1:1050790/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCAc > 1:161753/1‑150 (MQ=255) gatgatGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCAc > 2:4776952/1‑150 (MQ=255) atgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACt < 1:3169629/150‑1 (MQ=255) tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTg > 2:1293042/1‑150 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:1948751/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:1512756/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:2329658/150‑1 (MQ=255) gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGACGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGa < 2:2547127/150‑1 (MQ=255) gtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTc > 1:624136/1‑150 (MQ=255) gCAGCCGGATGACGATGGCCCGCCCGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCaa > 2:715101/1‑150 (MQ=255) gCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCaa > 2:3265093/1‑150 (MQ=255) gCAGCCGGATGACGATGGCCCGCCAGACGAGGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCaa < 2:5472937/150‑1 (MQ=255) gCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCg > 2:920172/1‑150 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 1:4422806/150‑1 (MQ=255) cGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTCGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt < 2:4267176/150‑1 (MQ=255) ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAATTGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATg > 2:5050251/1‑150 (MQ=255) aCGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTc < 2:5153446/150‑1 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:1426462/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 1:3181109/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:2402123/1‑150 (MQ=255) gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGa > 2:2402209/1‑150 (MQ=255) aTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa > 1:3896747/1‑150 (MQ=255) aTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa > 2:2889706/1‑150 (MQ=255) aTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa > 1:5596910/1‑150 (MQ=255) aTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa < 2:679011/150‑1 (MQ=255) ggCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAACTAACAAAAAAAGGCGATCCGGATGGATCGCCA‑ATTTTGATTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACa < 1:980807/150‑1 (MQ=255) cGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCtt > 2:3731593/1‑150 (MQ=255) gCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTg > 1:4593785/1‑150 (MQ=255) cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGAc < 1:2784859/150‑1 (MQ=255) aGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACg > 1:735450/1‑150 (MQ=255) aCGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAt < 2:650371/150‑1 (MQ=255) aTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtctt < 1:5218915/150‑1 (MQ=255) tGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGAtcttc > 1:1241652/1‑150 (MQ=255) aGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGc < 2:4845211/150‑1 (MQ=255) gggCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCa > 1:2370432/1‑150 (MQ=255) gCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACg > 1:5409688/1‑150 (MQ=255) gCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACg > 1:3787486/1‑150 (MQ=255) gccgccGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGccc < 1:2651163/150‑1 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAacac > 2:2993426/1‑148 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 1:3664818/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 1:1318413/1‑150 (MQ=255) tCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACAccc > 1:835781/1‑150 (MQ=255) ccGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCt < 2:4810082/150‑1 (MQ=255) gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGc > 1:2056417/1‑150 (MQ=255) cggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACgg < 1:4708552/150‑1 (MQ=255) ggccAAGCCTGAAAGTGGTCAAGTAACAATAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGc > 2:2148212/1‑150 (MQ=255) gccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCa > 2:1627180/1‑150 (MQ=255) gccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCa > 2:5128860/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg > 2:2627810/1‑150 (MQ=255) aaGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTg < 2:1318413/150‑1 (MQ=255) gCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACt > 2:3680247/1‑78 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 2:2589572/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:1481640/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:903330/1‑150 (MQ=255) tGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGa > 1:5470826/1‑150 (MQ=255) gTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTgg < 2:3328373/150‑1 (MQ=255) aaGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGcttctt > 1:815680/1‑150 (MQ=255) aGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACGCCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTg > 1:2206920/1‑150 (MQ=255) gTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAATCACCCTGCACCACGGCAGTGGCCGGGTTGGCTTCTTGa > 1:3065382/1‑150 (MQ=255) tAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGAc < 1:1903785/150‑1 (MQ=255) aaacaaaaaaGGCGATCCATCCGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACg > 2:5595087/5‑150 (MQ=39) aaacaaaaaaGGCGATCCATCCGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACg > 1:3856176/5‑150 (MQ=39) aCAAAATAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACgg > 2:2752037/1‑150 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCACTCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCAGCACCACGGCCGGGGCCGAGTTGGCTTCGTGACgggg > 1:4381292/1‑149 (MQ=255) aaaaaaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:450451/1‑150 (MQ=255) aaaaaaaGGCGATCCGGAAGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCAGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGt > 1:1834104/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 2:3852642/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 2:3852227/1‑150 (MQ=255) aaaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAc > 1:2286167/1‑150 (MQ=255) aaaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGAcc < 1:3265093/150‑1 (MQ=255) aaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 2:4747489/1‑150 (MQ=255) aaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 2:4895827/1‑150 (MQ=255) aaGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 2:4660559/1‑150 (MQ=255) aaGGCGATCCATCCGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCa > 1:4123793/1‑150 (MQ=255) aGGCGATCCGGCGGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAg < 2:5258798/150‑1 (MQ=255) gCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGc > 1:160617/1‑150 (MQ=255) gATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGccc > 2:4360869/1‑150 (MQ=255) ccGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagc < 2:3441710/150‑1 (MQ=255) cGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCcagca < 2:3091101/150‑1 (MQ=255) | TGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCT‑TTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTGCACCACGGCAGTGGCCGAGTTGGCTTCTTGACGGGTGACCAGGCCCAGCAGG > NC_002947/1512889‑1513186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |