Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,525,982 T→A 5.0% L83* (TTG→TAG)  murD → UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,525,9820TA 5.0% 854.4 / 21.8 253L83* (TTG→TAG) murDUDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Reads supporting (aligned to +/- strand):  ref base T (116/123);  new base A (7/6);  total (123/130)
Fisher's exact test for biased strand distribution p-value = 7.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 259 total aligned reads displayed.

TGCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATG  >  NC_002947/1525833‑1526130
                                                                                                                                                     |                                                                                                                                                    
tGCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCtt                                                                                                                                                      <  2:1019980/150‑1 (MQ=255)
tGCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCtt                                                                                                                                                      <  1:1960378/150‑1 (MQ=255)
 gCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTg                                                                                                                                                     <  2:1875299/150‑1 (MQ=255)
 gCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTg                                                                                                                                                     <  1:3625132/150‑1 (MQ=255)
        cGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGc                                                                                                                                              >  1:3533927/1‑150 (MQ=255)
           tCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTTGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCGTGGCCAAGGCCAGGCCgg                                                                                                                                           <  1:2211931/150‑1 (MQ=255)
           tCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCAAGGCCAGGCCgg                                                                                                                                           <  1:4027274/150‑1 (MQ=255)
            cGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCGTGGCCAAGGCCAGGCCggg                                                                                                                                          <  1:5169666/150‑2 (MQ=255)
            cGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGc                                                                                                                                          <  1:4879079/150‑1 (MQ=255)
            cGCCGAGACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGCACTGGCCGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCGTGGCCCAGGCCAGGCCggg                                                                                                                                          <  2:3078836/150‑2 (MQ=255)
                   aCCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTgcag                                                                                                                                   <  2:273693/150‑1 (MQ=255)
                           gcagcCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGc                                                                                                                           >  2:3454720/1‑150 (MQ=255)
                            cagcCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGcc                                                                                                                          <  1:2343794/150‑1 (MQ=255)
                              gccgccGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCcgc                                                                                                                        <  1:1198189/150‑1 (MQ=255)
                              gccgccGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCcgc                                                                                                                        <  1:1198580/150‑1 (MQ=255)
                                cgccgGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCcgcgc                                                                                                                      >  1:5335217/1‑150 (MQ=255)
                                  ccgGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgt                                                                                                                    >  1:2389580/1‑150 (MQ=255)
                                  ccgGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgt                                                                                                                    <  1:1654389/150‑1 (MQ=255)
                                      aaCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcg                                                                                                                <  1:5301102/150‑1 (MQ=255)
                                       aCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTTCGGCTCCAACGAGCTGTACGTGAGCCCCGTCCTGGCCTTGGCCACGCAGGCCTTGCAGCATGATGCCGCtcttggcgt                                                                                                               <  2:266214/150‑1 (MQ=255)
                                       aCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgt                                                                                                               <  2:2614013/150‑1 (MQ=255)
                                       aCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgt                                                                                                               <  2:5117110/150‑1 (MQ=255)
                                       aCTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgt                                                                                                               <  2:551371/150‑1 (MQ=255)
                                          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                            <  1:470790/150‑1 (MQ=255)
                                          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                            <  2:1617649/150‑1 (MQ=255)
                                          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                            >  2:2808938/1‑150 (MQ=255)
                                          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                            <  2:5341498/150‑1 (MQ=255)
                                          ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                            <  2:1163371/150‑1 (MQ=255)
                                           gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAg                                                                                                           <  1:5595434/150‑1 (MQ=255)
                                           gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAg                                                                                                           >  1:4274078/1‑150 (MQ=255)
                                                  tGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTg                                                                                                    <  1:672360/150‑1 (MQ=255)
                                                   gcgcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCGCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTgg                                                                                                   >  1:2651350/1‑150 (MQ=255)
                                                       cGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGAc                                                                                               <  1:3046348/150‑1 (MQ=255)
                                                       cGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGAc                                                                                               >  2:4922684/1‑150 (MQ=255)
                                                            ttACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATaga                                                                                          <  1:3226883/150‑1 (MQ=255)
                                                             tACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATagag                                                                                         <  2:5603278/150‑1 (MQ=255)
                                                                 cGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                     >  2:3612787/1‑150 (MQ=255)
                                                                 cGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGt                                                                                     >  1:2856393/1‑150 (MQ=255)
                                                                  gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGtt                                                                                    >  2:3976754/1‑150 (MQ=255)
                                                                  gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGtt                                                                                    >  1:3455978/1‑150 (MQ=255)
                                                                            gTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCAt                                                                          <  2:3744358/150‑1 (MQ=255)
                                                                                      gtgAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCTTGGCATGgcga                                                                <  1:4468399/150‑2 (MQ=255)
                                                                                      gtgAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGgcgc                                                                >  2:3531483/1‑150 (MQ=255)
                                                                                           cTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGTGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATc                                                           <  1:2571285/150‑1 (MQ=255)
                                                                                           cTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATc                                                           >  1:5066390/1‑150 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  2:4122534/150‑1 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  2:4407435/150‑1 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  1:3868620/150‑1 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  1:2353403/150‑1 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  2:1470923/150‑1 (MQ=255)
                                                                                              gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                        <  2:294805/150‑1 (MQ=255)
                                                                                                 gTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGcc                                                     >  1:4156429/1‑150 (MQ=255)
                                                                                                   ggtgttCGTGTGCCGCGCGCACGAGCTGTAGGTGAGCGCCGGCCTGGCCTTGGGCACGCCGGCGTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTGTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                   >  2:131502/5‑150 (MQ=255)
                                                                                                   ggACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAt                                                   >  2:4084124/1‑150 (MQ=255)
                                                                                                     aCTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCa                                                 <  1:1625982/150‑1 (MQ=255)
                                                                                                     aCTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATCCCAAGGCGCCGATCGTTGCCATCa                                                 <  2:496892/150‑1 (MQ=255)
                                                                                                          cTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGt                                            >  2:5166303/1‑150 (MQ=255)
                                                                                                           tgtgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGtt                                           >  1:1737005/1‑150 (MQ=255)
                                                                                                            gtgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTc                                          <  1:1575499/150‑1 (MQ=255)
                                                                                                            gtgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTc                                          >  1:806297/1‑150 (MQ=255)
                                                                                                             tgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTcc                                         <  2:5244926/150‑1 (MQ=255)
                                                                                                             tgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTcc                                         <  2:5185459/150‑1 (MQ=255)
                                                                                                               ccGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                       >  2:806646/1‑150 (MQ=255)
                                                                                                               ccGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCaa                                       <  2:1096699/150‑1 (MQ=255)
                                                                                                                cgcgCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAAc                                      <  2:1254005/150‑1 (MQ=255)
                                                                                                                  cgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                    >  2:449226/1‑150 (MQ=255)
                                                                                                                  cgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                    >  2:483635/1‑150 (MQ=255)
                                                                                                                  cgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                    <  2:3817226/150‑1 (MQ=255)
                                                                                                                  cgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGc                                    >  1:1294906/1‑150 (MQ=255)
                                                                                                                     cAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                 >  2:2463096/1‑150 (MQ=255)
                                                                                                                     cAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                 >  1:1666959/1‑150 (MQ=255)
                                                                                                                     cAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                 >  1:137934/1‑150 (MQ=255)
                                                                                                                     cAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                 >  2:1679288/1‑150 (MQ=255)
                                                                                                                      aaCGAGCTGTACGTGATCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCGAGGCGCCGATCGTTGCCATCAGTGGTGCCAACGCCAag                                >  1:367691/1‑150 (MQ=255)
                                                                                                                       aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAagt                               >  2:712686/1‑149 (MQ=255)
                                                                                                                       aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                               <  2:1460416/150‑1 (MQ=255)
                                                                                                                       aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                               <  2:5500309/150‑1 (MQ=255)
                                                                                                                       aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                               >  1:101087/1‑150 (MQ=255)
                                                                                                                       aCGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAaga                               >  2:2136160/1‑150 (MQ=255)
                                                                                                                        cGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAagag                              >  1:3396331/1‑150 (MQ=255)
                                                                                                                          tgCTGTACGTGAGCCCCAGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCa                            >  2:1060883/2‑150 (MQ=255)
                                                                                                                             tGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCAACAGTGGTTCCAACGCCAAGAGCACCg                         >  2:4673332/1‑150 (MQ=255)
                                                                                                                               tACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                       <  2:3282806/150‑1 (MQ=255)
                                                                                                                                     aGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCCTCAGTGGTTCCAACGCCAAGAGCACCGTCacgacg                 >  2:5462510/1‑150 (MQ=255)
                                                                                                                                      gCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGc                <  2:2392834/150‑1 (MQ=255)
                                                                                                                                       ccccGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCt               >  1:397853/1‑150 (MQ=255)
                                                                                                                                        gccGGCGTGGCCAAGGCCAGGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTg              >  1:4618253/2‑150 (MQ=255)
                                                                                                                                        gccGGCGTGGCCAAGGCCAGGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTg              >  2:1508725/2‑150 (MQ=255)
                                                                                                                                         ccGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTgg             >  2:3995753/1‑150 (MQ=255)
                                                                                                                                          cGGCGTGGCCAAGGCCAGGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGt            >  2:1859785/1‑150 (MQ=255)
                                                                                                                                          cGGCGTGGCCAAGGCCAGGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGt            >  2:2023686/1‑150 (MQ=255)
                                                                                                                                          cGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGt            <  2:4562910/150‑1 (MQ=255)
                                                                                                                                          cGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGt            <  2:3662131/150‑1 (MQ=255)
                                                                                                                                              ctggcctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt        <  1:4873227/150‑1 (MQ=255)
                                                                                                                                              ctggcctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt        <  1:1261697/150‑1 (MQ=255)
                                                                                                                                              ctggcctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt        >  1:109085/1‑150 (MQ=255)
                                                                                                                                               tggcctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTg       >  1:4979468/1‑150 (MQ=255)
                                                                                                                                                  cctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa    <  2:3375628/150‑1 (MQ=255)
                                                                                                                                                   ctTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAGAt   >  1:2879828/1‑150 (MQ=255)
                                                                                                                                                    ttGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATg  >  1:2945207/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TGCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATG  >  NC_002947/1525833‑1526130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: