| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,560,379 | A→C | 9.7% | intergenic (+26/+48) | sbcB → / ← PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,560,379 | 0 | A | C | 9.7% | 615.4 / 37.9 | 223 | intergenic (+26/+48) | sbcB/PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Reads supporting (aligned to +/- strand): ref base A (107/92); new base C (14/9); total (122/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
CTTGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCAC > NC_002947/1560230‑1560525 | cTTGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCaa > 1:1013463/1‑150 (MQ=255) ttGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAt > 2:401168/1‑150 (MQ=255) ttGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAt > 2:4516118/1‑150 (MQ=255) gggCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAAtgt > 2:4993954/1‑150 (MQ=255) aCTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCgg < 2:2108723/150‑1 (MQ=255) cTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGc > 1:4402818/1‑150 (MQ=255) ttCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAATCGCCGGCAATGTGCCGGCg > 1:1736219/1‑150 (MQ=255) tctaaaaGGCGCGCCAGCACGCCTGGGTGGGCGCCGACGCGGCCGGCCGGGGGGTGTTGGCGGCCTGGCAACTGCATGCTCGACAATTGCAGCAACGCTTTTCAAGCGGCTGTTGGCTTATAAACAAACACGCCGGCAATGTGCCGGCGt < 1:1427578/147‑1 (MQ=255) tCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGt > 2:2709769/1‑150 (MQ=255) tCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGAAACTGCATGATCGACATTTGCAGTAACGCTATTCAATCGGCTGTTGGAAGATAAACAAAAACGCCGGCACATTGCCGGCGt < 2:1716410/150‑1 (MQ=255) cGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACATTGCCGGCGtt < 2:2245878/150‑1 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCTGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGttt < 1:3648529/150‑1 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGttt > 1:4256182/1‑150 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGttt > 2:240859/1‑150 (MQ=255) gAAAAGGCGCGCCAGCAAGCCGGGGCGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCACCTGCCTGCTCGACACTTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAACACGCCGGCACATTGCCGGCGttt < 2:3294687/150‑1 (MQ=255) acaGGCGCGCCAGCACGCCTGGGAGGGCGCCGACGAGGCCGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAAGCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGttttt < 1:5399706/148‑1 (MQ=255) aaaGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGttttt < 2:5236962/150‑1 (MQ=255) aGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTttgt < 1:2709769/150‑1 (MQ=255) ggCGCGCCAGCACGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTttgtt < 1:2778957/150‑1 (MQ=255) gcgcgcCAGCACGCCTGGGAGGGCGCCGACGAGGCTGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATCCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACATTGCCGGCGTTTttgttt < 1:4105731/150‑2 (MQ=39) cgcgcCCGCACGCCTGGGAGGGCGCCGACGAGGCAGGCTGGCGCGTGTGGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTtgttgt < 1:3938527/150‑1 (MQ=255) cgcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTtggtgt > 1:5091601/1‑150 (MQ=255) gcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTCTTCAATCGGCTGATGGCAGATAAACAAAATCGCCGGCACTGTGCCGGCGTTTTTGTtgtg > 1:5321762/1‑150 (MQ=255) gcgcCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTtgtg > 2:4644470/1‑150 (MQ=255) cAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGaa < 2:4214695/150‑1 (MQ=255) aGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAg > 1:2518349/1‑150 (MQ=255) gcccgCCTGGGAGGGCGCCGCCGCGGCAGGCCGGCGCGGGTTGGAGGCCGGGCAACGGCATGCGCGACAATGGCCGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGc < 1:5052473/146‑1 (MQ=255) gCACGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGAAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGc < 2:712249/150‑1 (MQ=255) aGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCTACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTGTTTGTTGTGAGAAGCAag > 2:4433017/1‑150 (MQ=255) gCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACTGTGCCGGCGTTTTTGTTGTGCGAAGCAaga > 1:969155/1‑150 (MQ=255) ccTGGGTGGGCGCCTACGCGGCAGGCTGGCGCTTTTTGTTGGCCTGGCAAGGGCTGGCTCTACAATGGCTGTAACGCTATTCAATCGGCTGATGGCAGATAAAAACAAACGCCGTCAATGTGCCGGCGATTTTGTTGTGCGAAGCattag < 2:1560206/150‑5 (MQ=255) cTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAgg > 2:3941147/1‑150 (MQ=255) cTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATGGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAgg < 2:2527556/150‑1 (MQ=255) tGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGTAACGCTATACAATCGGCTGTTGGCAGATAAAAAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAggg < 1:1135849/150‑1 (MQ=255) gggAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGTTAAACAATATCGCCGGCAATGTGGGGGCGTTTTTGTTGTGGGAAGCAAGAgggg > 1:5075808/1‑149 (MQ=255) gggAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACACAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGc < 2:3237901/150‑1 (MQ=255) gggAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGc < 1:3224749/150‑1 (MQ=255) aGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTa < 2:3524185/150‑1 (MQ=255) gcgcCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAATCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGc > 1:2165573/1‑150 (MQ=255) ccGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGAAAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGa < 1:3945941/150‑1 (MQ=255) cgacgaGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGAt < 2:832724/150‑1 (MQ=255) gcggctggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCCGGAACGCTATTCAATCGGCTGATGGCATATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATc < 1:2417869/148‑1 (MQ=255) gaGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATc > 1:4154143/1‑150 (MQ=255) ggcaggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAg < 1:1303230/150‑1 (MQ=255) gcaggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGt > 1:3135725/1‑150 (MQ=255) aggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTcc < 2:3643878/150‑1 (MQ=255) gcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACTGTGCCGGCGTGTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCcag > 1:4267188/1‑150 (MQ=255) ggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCcagcag > 1:1059947/1‑150 (MQ=255) ttGGAGGCCTGGCAAGTGCATGCTCGACAATTGCTGGAACGCTATTCAATCGGCTGATGGGAGTTAAACAATTTCGCCGGCAATGTGCCGGGGTTTTTGTTGTGGGTAGGAAGTGGGCGTTTGCGGTTTATGAGTCCAGGAGGGTTgggg > 2:4822771/1‑147 (MQ=255) ttGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGccc > 2:102577/1‑150 (MQ=255) tGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCa < 1:3554145/150‑1 (MQ=255) cTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAATTCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCa > 2:493680/1‑150 (MQ=255) cTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACTGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCa > 1:1524107/1‑150 (MQ=255) tGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATTCGGATAATCAGTACAGCAGGGTTGCCCACCTTTCaa > 1:563095/1‑150 (MQ=255) ggCAACTGCATGCTCGACAATTGCAGGAACGCTATTCACTCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAAc < 2:2062829/150‑1 (MQ=255) ggCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAAc < 2:601038/150‑1 (MQ=255) gCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAAcc > 1:4510218/1‑150 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGt < 1:872958/150‑1 (MQ=255) tGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTc < 2:5427464/150‑1 (MQ=255) gCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcg > 2:5129882/1‑150 (MQ=255) cATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcgc < 1:4452087/150‑1 (MQ=255) cTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCgccgcc < 2:5057054/150‑1 (MQ=255) cTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGGATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCgccgcc > 1:779344/1‑150 (MQ=255) tCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGccc > 2:3553835/1‑150 (MQ=255) tCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGccc > 2:2653428/1‑150 (MQ=255) aaTTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGt < 1:4993954/150‑1 (MQ=255) ttGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAACACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTgg < 2:2970459/150‑1 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCttt > 1:2375146/1‑150 (MQ=255) gAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTcc < 1:5468701/150‑1 (MQ=255) cGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCAct > 2:2789264/1‑150 (MQ=255) gCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATTCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCActc > 2:2489172/1‑150 (MQ=255) gCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCActc > 2:3191508/1‑150 (MQ=255) tATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCtt > 1:1921117/1‑150 (MQ=255) aaTCGGCTGATGGCAGATAAACAAACACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 2:3827255/150‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAgg < 2:1751975/150‑1 (MQ=255) cGGCTGATGGCATATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTc < 1:2170320/150‑1 (MQ=255) gCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCtt > 2:2366279/1‑150 (MQ=255) gATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGGCTtgtg > 1:1629390/1‑150 (MQ=255) ttGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTgg < 1:2589509/149‑1 (MQ=255) gCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTg < 1:4951636/150‑1 (MQ=255) aGATAAACAAAATCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTgcc > 1:2696376/1‑150 (MQ=255) tAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCCGTCCAGCAGGGTTGCCCAGCATTCAACCACGTCGCCGCCCCAAGTGGCGGTCCACTCGTTCAGGGTCTTGTGGTTgccgcc > 2:3873288/1‑150 (MQ=255) aaCAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGTCtt < 2:1633722/150‑1 (MQ=255) aCAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGACGCAAGAGGGCGTATGCGGATAATCAGTCCCGCCGGGTTGCCCCGCTTTCAACCACGGCGCCGCCCCACGTGGCTTGCCACTCGTGCCGGGGCTGGGGGGTgccgccgtg > 2:1419629/1‑147 (MQ=255) aCAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTcc < 2:194762/119‑1 (MQ=255) aCAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTcc > 1:194762/1‑119 (MQ=255) ctcataCGGCGGCTATGTGCCGGGGTTTTTGTTGTGCGAAGCTTGTGGGCGTATGCGGATTTTCTGTCGAGCAGGGTTGCCCAGCTTTCATCCTCGTCGCCGCCCCAAGTGGGTTTCGACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTg < 1:175446/145‑1 (MQ=255) aaaaaCGCCGGCAATGTGCCGGTGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 1:2953298/1‑150 (MQ=255) aaaaaCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 2:4905673/1‑150 (MQ=255) aaaaaCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCGTTCAGGGTCTTGTGGTTGCCGCCTTTgg > 2:3103211/1‑150 (MQ=255) aaaaCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGt > 1:2246854/1‑150 (MQ=255) aaaaCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCCCCCCAACTGGCTTTCCACTCTTTCAGGGGCGTGTGGTTGCCGCCGTTGGt > 1:3780691/1‑150 (MQ=255) aCGCCGGCACATTGCCGGCGTTTTTGTTTTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCACCAGGGTTTCCCAGCGTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACAATTTCAGGGTCTTGTGGTTGCCGCCGTTGGTTTc > 1:2059320/1‑150 (MQ=255) aCGCCGGCACATTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTAAAACACGTCGCCGCCCCAAGTGGCTTTCCAATATTTAAGGGTCTTGTGGTTGACGCCATTTGttta > 1:5227871/1‑149 (MQ=255) aCGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTc < 1:2406886/150‑1 (MQ=255) cGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCg > 2:460351/1‑150 (MQ=255) cGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCGTTGGTTTCg > 2:889069/1‑150 (MQ=255) ggCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCa > 2:1141265/1‑150 (MQ=255) ggCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCa > 1:1349718/1‑150 (MQ=255) ggCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCa > 1:4567836/1‑150 (MQ=255) | CTTGGGCGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCAATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGATCAC > NC_002947/1560230‑1560525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |