| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,760,821 | C→G | 5.6% | intergenic (+22/‑39) | PP_1559 → / → PP_1560 | holin/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,760,821 | 0 | C | G | 5.6% | 906.2 / 32.2 | 266 | intergenic (+22/‑39) | PP_1559/PP_1560 | holin/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (95/156); new base G (4/11); total (99/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
Only 100 of 278 total aligned reads displayed.
CGCTGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCGC > NC_002947/1760672‑1760968 | cGCTGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTACGGCTCAGGGCTGATGAGCTGCACCGGATGcgccgc < 1:109342/150‑1 (MQ=255)cGCTGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGcgccgc < 1:3927730/150‑1 (MQ=255) ctCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgc < 1:3269197/150‑1 (MQ=255) ctCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgc < 1:1914402/150‑1 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg > 2:2968459/1‑150 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg > 1:2478847/1‑150 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTCCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg > 2:687587/1‑150 (MQ=255) cGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcgc < 2:2771138/150‑1 (MQ=255) aaTGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGa > 1:1797470/1‑150 (MQ=255) atggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGaa < 1:78931/150‑1 (MQ=255) tggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAAt < 1:2743353/150‑1 (MQ=255) ggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatccg < 2:3493203/150‑6 (MQ=255) ggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatccg < 2:3968375/150‑6 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatccgg < 1:1864519/150‑7 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATgg < 1:4762437/150‑1 (MQ=255) atggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatccggt < 1:20778/150‑8 (MQ=255) atggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGa < 1:5465252/150‑1 (MQ=255) atggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGa < 2:3964499/150‑1 (MQ=255) atggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGa < 2:3193529/150‑1 (MQ=255) tggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGAt < 1:345192/150‑1 (MQ=255) cTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATcaac < 1:494615/150‑1 (MQ=255) tGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATcaacaa < 2:567208/150‑1 (MQ=255) ccGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGt < 1:4919356/150‑1 (MQ=255) cAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGa < 1:3543567/150‑1 (MQ=255) aGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGAt < 2:4088537/150‑1 (MQ=255) aGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGAt < 1:2512378/150‑1 (MQ=255) aGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGGTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGAt < 2:1269653/150‑1 (MQ=255) ggCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCGGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGa > 1:4154908/1‑150 (MQ=255) ggCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACATGTGGATGa < 2:1628911/150‑1 (MQ=255) gCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGaa > 1:2287825/1‑150 (MQ=255) ggCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTg < 2:808089/150‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc < 2:1034553/150‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc > 1:3974263/1‑150 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc < 1:405059/150‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc < 1:348739/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:1454547/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:1010673/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:1947136/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 2:5576870/150‑1 (MQ=255) tGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAgcaagcaa > 2:4755474/1‑150 (MQ=255) gTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAAtc > 2:5052265/1‑150 (MQ=255) tCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAAtct > 1:5536698/1‑150 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct > 2:1152728/1‑150 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct < 2:5418206/150‑1 (MQ=255) gCTTCTTGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGTATCAACAAGTGTATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCtt < 2:3919498/150‑1 (MQ=255) cTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCttt < 2:5156454/150‑1 (MQ=255) cTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCttt < 1:3231216/150‑1 (MQ=255) aTGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTc < 1:849903/150‑1 (MQ=255) gggCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCAGCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCca < 2:1824284/150‑1 (MQ=255) gCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCcagc > 1:887178/1‑150 (MQ=255) gtgaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGTTGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACCAGTGGATGAAGGTTGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc < 1:4245195/148‑1 (MQ=255) gagaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc < 2:2689086/150‑1 (MQ=255) gagaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGACGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc > 1:951850/1‑150 (MQ=255) agaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATcc > 2:4164545/1‑150 (MQ=255) gaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCt < 1:1324680/150‑1 (MQ=255) aaGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTg < 1:3756526/150‑1 (MQ=255) aGCTTCGCGGCTACACCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCNTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTgg < 2:1924442/150‑1 (MQ=255) gCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGa < 2:2540313/150‑1 (MQ=255) ttCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGAcc > 1:4679059/1‑150 (MQ=255) ggCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACcagcag < 2:1413633/150‑1 (MQ=255) aCTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcaga < 1:5027661/150‑1 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag > 2:3381317/1‑150 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag < 1:5235012/150‑1 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag > 2:2414523/1‑150 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag < 2:3440047/150‑1 (MQ=255) ccGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagc < 1:2856309/150‑1 (MQ=255) gACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagcag > 1:3813855/1‑150 (MQ=255) aCCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagcaga < 2:3813855/150‑1 (MQ=255) cTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGAcc > 1:1591303/1‑150 (MQ=255) cTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGAcc < 1:3137472/150‑1 (MQ=255) tGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCa < 2:2233092/150‑1 (MQ=255) ttCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGc < 2:2024127/150‑1 (MQ=255) tGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGc > 1:647838/1‑150 (MQ=255) tctcGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTc < 2:12560/150‑1 (MQ=255) cGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGaa < 1:254376/150‑1 (MQ=255) cGTAAGGCTCAGGGCTGATGAGCTGCACAGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGaa < 1:5360228/150‑1 (MQ=255) tAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTGTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACa < 1:263175/150‑1 (MQ=255) ggCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGAt < 1:2968459/150‑1 (MQ=255) gCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATc < 1:1684798/150‑1 (MQ=255) tCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGACTGGATCAACAAGTGGCTGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGCCCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATcgc > 2:931422/1‑150 (MQ=255) gggCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGAc < 1:2031267/150‑1 (MQ=255) gCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGAccc < 1:687587/150‑1 (MQ=255) cTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCa < 1:3112841/150‑1 (MQ=255) gatgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGa > 2:366545/1‑150 (MQ=255) gatgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGa > 2:4543382/1‑150 (MQ=255) atgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGaa < 2:4185762/150‑1 (MQ=255) atgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGaa < 2:4261312/150‑1 (MQ=255) gCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTg < 1:3691910/150‑1 (MQ=255) cTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTgg < 1:4593181/150‑1 (MQ=255) ccGGATGCGCCGCCCGGCGCGAATGGATCAACAAGAGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTg > 1:2663523/1‑150 (MQ=255) ggATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGAt < 2:1952704/150‑1 (MQ=255) ggATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGAt < 1:123892/150‑1 (MQ=255) attcgcgcCGGGCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGAt > 2:2264399/5‑150 (MQ=255) tGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGa < 1:3504391/150‑1 (MQ=255) gcgcCGGGCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAg > 2:1809196/1‑150 (MQ=255) gcgcCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAg < 2:451513/150‑1 (MQ=255) gccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgc > 1:4412770/1‑150 (MQ=255) gccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgc > 1:5098598/1‑150 (MQ=255) ccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgcg > 2:3198818/1‑150 (MQ=255) cgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgcgc > 1:5116024/1‑150 (MQ=255) | CGCTGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCGC > NC_002947/1760672‑1760968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |