| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,760,822 | C→G | 5.6% | intergenic (+23/‑38) | PP_1559 → / → PP_1560 | holin/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,760,822 | 0 | C | G | 5.6% | 897.4 / 32.2 | 266 | intergenic (+23/‑38) | PP_1559/PP_1560 | holin/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (94/156); new base G (4/11); total (99/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 278 total aligned reads displayed.
TGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCGCTGG > NC_002947/1760675‑1760971 | ctCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgc < 2:1289265/150‑1 (MQ=255) ctCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgc < 1:3696226/150‑1 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg < 1:5468163/150‑1 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg > 1:2478847/1‑150 (MQ=255) tCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTCCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcg > 2:687587/1‑150 (MQ=255) cGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGgcgc < 2:5316728/150‑1 (MQ=255) gAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGcgcg > 1:4769615/1‑150 (MQ=255) aaTGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGa > 1:4632055/1‑150 (MQ=255) atggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatc < 1:4201230/150‑4 (MQ=255) tggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatcc < 1:251166/150‑5 (MQ=255) tggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAAt < 1:2743470/150‑1 (MQ=255) ggatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGGGCGgcgcatccg < 2:3968279/150‑6 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATgg < 2:3818130/150‑1 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATgg < 1:4762429/150‑1 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATgg > 1:451513/1‑150 (MQ=255) gatggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATgg < 1:3464910/150‑1 (MQ=255) tggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGAt < 1:1224536/150‑1 (MQ=255) tggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGAt < 1:3160702/150‑1 (MQ=255) tggGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGAt > 2:5514400/1‑150 (MQ=255) gCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATcaa < 2:1442482/150‑1 (MQ=255) gCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATcaa > 1:1417966/1‑150 (MQ=255) cTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATcaac > 2:123892/1‑150 (MQ=255) gCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAg > 2:3453423/1‑150 (MQ=255) ccGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGt > 2:3032096/1‑150 (MQ=255) cGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTg > 1:3942848/1‑150 (MQ=255) gCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTgg < 1:900782/150‑1 (MQ=255) cAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGa < 1:426954/150‑1 (MQ=255) gCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGaa < 1:4941118/150‑1 (MQ=255) cATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAg < 1:3275601/150‑1 (MQ=255) cATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAg < 2:4054133/150‑1 (MQ=255) ggCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTg < 2:808089/150‑1 (MQ=255) gCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTgg > 1:5083387/1‑150 (MQ=255) ccACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGaa < 2:1975582/124‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc < 1:348831/150‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc < 1:1908870/150‑1 (MQ=255) acaTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTACCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGccc > 2:4356426/1‑150 (MQ=255) aTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGt < 2:1256716/150‑1 (MQ=255) aTTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGt < 1:5435247/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:2012277/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:1947136/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:1010673/150‑1 (MQ=255) cggcggCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGa < 1:872806/150‑1 (MQ=255) ggcATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGagcaa < 2:1711927/150‑1 (MQ=255) cATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGagcaagc > 2:4880323/1‑150 (MQ=255) gTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAAtc > 2:4200015/1‑150 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct < 1:3985693/150‑1 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct > 1:81843/1‑150 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct < 2:2821121/150‑1 (MQ=255) ggCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATctct < 1:5182094/150‑1 (MQ=255) cTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCttt < 1:5256888/150‑1 (MQ=255) ttCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTg > 1:3504852/1‑150 (MQ=255) ttCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTg < 1:2876019/150‑1 (MQ=255) tCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGc < 2:3195265/150‑1 (MQ=255) tggCGTTGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCca < 2:5060006/149‑1 (MQ=255) ggCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCcag < 1:1791246/150‑1 (MQ=255) gCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCcagc > 2:4725350/1‑150 (MQ=255) gagaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGCTCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc > 2:4176341/1‑150 (MQ=255) gagaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc < 1:266283/150‑1 (MQ=255) gagaAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGACGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATc > 1:951927/1‑150 (MQ=255) aaGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTg < 2:2605873/150‑1 (MQ=255) ttCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGAcc > 2:3276024/1‑150 (MQ=255) tCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACca < 1:2074805/150‑1 (MQ=255) tACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACcagcagcag > 1:695852/1‑150 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagatg > 2:5623273/1‑148 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag > 2:2414537/1‑150 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag > 2:3381318/1‑150 (MQ=255) tCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaag < 1:1651529/150‑1 (MQ=255) ccGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagc < 1:3129977/150‑1 (MQ=255) cGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagca > 2:4517509/1‑150 (MQ=255) gACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaagcag > 1:3813855/1‑150 (MQ=255) cTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGAcc > 1:324103/1‑150 (MQ=255) cTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGAcc > 1:1591303/1‑150 (MQ=255) cTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGAcc < 1:1300401/150‑1 (MQ=255) tGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCa < 2:4094427/150‑1 (MQ=255) tGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCa < 1:3063672/150‑1 (MQ=255) gTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCagcagaa > 2:1086807/1‑141 (MQ=255) tGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGc < 2:1809732/150‑1 (MQ=255) cGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGaa < 1:254249/150‑1 (MQ=255) cGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGaa < 2:3743131/150‑1 (MQ=255) gTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAAc < 1:3659439/150‑1 (MQ=255) aGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGa < 1:213979/150‑1 (MQ=255) tCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGACTGGATCAACAAGTGGCTGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGCCCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATcgc > 2:931422/1‑150 (MQ=255) aGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGa > 1:5539608/1‑150 (MQ=255) aGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGa < 2:212121/150‑1 (MQ=255) gCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGAccc < 1:5102364/150‑1 (MQ=255) tgatgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAg > 2:1936298/1‑150 (MQ=255) tcaacaGCTGCACCGGATGCGCAGCACGGCGCGACTGGATCAACAAGAGCATCATGGGGGCCCGTGAACGAGCAAGCTAGCGCTTTGCTCCAGCAGGTCCTGGACCAGCGGCGTAAGCAGAACAGCCTGCTCGAACAGATCGCGAgccgg > 2:3656498/6‑148 (MQ=255) atgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGaa < 1:665062/150‑1 (MQ=255) tgaGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAAc > 2:587040/1‑150 (MQ=255) aGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACtt < 2:3937259/150‑1 (MQ=255) cTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTgg < 2:228280/150‑1 (MQ=255) cACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCAc > 2:27078/1‑150 (MQ=255) cGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGa > 1:1810813/1‑150 (MQ=255) ttcgcgcCGGGCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATc > 1:2569145/4‑150 (MQ=255) gccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgc > 2:223620/1‑150 (MQ=255) gccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgc > 1:500678/1‑150 (MQ=255) gccgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgc > 1:4073356/1‑150 (MQ=255) cgccCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGgcgc > 2:1873956/1‑150 (MQ=255) ccGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCgctgg < 1:3782069/150‑1 (MQ=255) ccGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCgctgg > 1:2740431/1‑150 (MQ=255) | TGCTCGAATGGATGGGCTTGCCGCAGGGCATGGCCACATTCGCCGGCGGCATGGTCGGCTTCATGGGCGTGGAGAAGCTTCGCGGCTACTCCGACCTGTTCCTGTCTCGTAAGGCTCAGGGCTGATGAGCTGCACCGGATGCGCCGCCCGGCGCGAATGGATCAACAAGTGGATGAAGGTGGCCCGTGAACGAGCAAGCAATCTCTTTGCTCCAGCAGATCCTGGACCAGCAGCAGAAGCAGACCAGCCTGCTCGAACAGATCGCGACCCAGAACTTGGCACTGATCGAGGCGCTGG > NC_002947/1760675‑1760971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |