| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,944,112 | A→C | 5.2% | intergenic (‑65/‑114) | PP_1738 ← / → PP_1739 | hypothetical protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,944,112 | 0 | A | C | 5.2% | 933.6 / 27.5 | 271 | intergenic (‑65/‑114) | PP_1738/PP_1739 | hypothetical protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (125/132); new base C (7/7); total (132/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.13e-01 | |||||||||||
Only 100 of 281 total aligned reads displayed.
TGGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG > NC_002947/1943963‑1944259 | tGGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCaaa < 2:4587139/150‑1 (MQ=255)tGGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCaaa < 1:1613935/150‑1 (MQ=255) ggCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAg > 2:2810777/1‑150 (MQ=255) aGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTg < 1:2808773/150‑1 (MQ=255) gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGccc > 2:5376714/1‑150 (MQ=255) gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGccc > 2:3619629/1‑150 (MQ=255) gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGccc > 2:1563031/1‑150 (MQ=255) cGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAACTTTGCCCGc < 2:4122777/150‑1 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt < 1:536436/150‑1 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt > 1:5516463/1‑150 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt < 1:4074810/150‑1 (MQ=255) ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTg > 1:1432465/1‑150 (MQ=255) ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTg > 1:1591540/1‑150 (MQ=255) ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTg < 2:3309718/150‑1 (MQ=255) tGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCAttt < 2:2480835/150‑1 (MQ=255) gAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTg < 1:2293239/150‑1 (MQ=255) aaGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTgg < 1:3639999/150‑1 (MQ=255) aGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGc < 2:759105/150‑1 (MQ=255) ggCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTa < 1:3692422/150‑1 (MQ=255) gCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTAc < 2:5492632/150‑1 (MQ=255) gCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTAc < 1:1865565/150‑1 (MQ=255) ccACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCACAGTTGCCCGCTGCGGTGGCATTTGGCGTACt > 1:988104/1‑150 (MQ=255) acaGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTg > 1:3200263/1‑150 (MQ=255) acaGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTg > 1:2421426/1‑150 (MQ=255) aGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCt > 1:4919539/1‑150 (MQ=255) cattttcAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATTTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATc < 2:1072351/144‑1 (MQ=255) aTGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCt > 2:3668578/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 2:3759642/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 1:5045922/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 2:4705150/1‑150 (MQ=255) gCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCaa < 2:1638148/150‑1 (MQ=255) gCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCaa < 1:1707708/150‑1 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATa < 2:5430691/150‑1 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATa < 1:4096755/150‑1 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATa > 2:1597258/1‑150 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGAAAAGATCGAAGCATGTAATCACACAACTGAACGCAAGGTCGTGCAGTGTGAAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGAGGTGTCATTTGGCGTACTTGCTATCTGCAACATa < 1:2204934/150‑1 (MQ=255) ccGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTg > 1:660089/1‑150 (MQ=255) aGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCgggg > 1:4963190/1‑150 (MQ=255) aGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGa < 1:3800997/150‑1 (MQ=255) aGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGa < 1:2069152/150‑1 (MQ=255) tcGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAt < 2:4415587/149‑1 (MQ=255) gAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAttt > 1:401669/1‑150 (MQ=255) gAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGAttt < 1:2051055/150‑1 (MQ=255) gcgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGc < 1:4668293/150‑1 (MQ=255) gcgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGc < 2:2431332/150‑1 (MQ=255) cgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGcc < 1:5279767/150‑1 (MQ=255) cgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGcc > 1:909406/1‑150 (MQ=255) gcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCt > 1:1188541/1‑150 (MQ=255) gcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCt > 2:1463250/1‑150 (MQ=255) aaaGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTa < 1:1464050/150‑1 (MQ=255) aaGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAg < 2:3052865/150‑1 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg < 1:5376714/150‑1 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg > 2:2710327/1‑150 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg > 1:868069/1‑150 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg < 2:5335996/150‑1 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg < 2:1244075/150‑1 (MQ=255) aGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGc < 1:1056739/150‑1 (MQ=255) cATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCAt < 2:1566310/150‑1 (MQ=255) tGTAATCCCCCAAAAGAACGCATGGTCGAGCAGTGTGCTGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATaa < 1:4748244/150‑1 (MQ=255) tGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATaa < 1:836681/150‑1 (MQ=255) gTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAg < 1:4382933/150‑1 (MQ=255) cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt > 1:1502097/1‑150 (MQ=255) cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt < 2:508601/150‑1 (MQ=255) cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt > 2:2927426/1‑150 (MQ=255) ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCGTg > 1:2928004/1‑150 (MQ=255) ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGGGTGAGATTGCCGTAGAAACGGGCATAAGCGATCATg > 1:1019513/1‑150 (MQ=255) acAAAAGAACGCAAGGAAGAGCAGTGTGCAGGCTAGGAACAAAAACAGGCGGGCAAAGATGCCCGCTGAGCTGGAATTTGGAGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTTCCTTAGAAAATGGCATAATCTATCATg > 2:4363998/2‑150 (MQ=255) cAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCATAGAAACGGGCATAACCGAGCATgg > 2:1861152/1‑150 (MQ=255) aaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGAt < 2:2147017/150‑1 (MQ=255) aaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGAt < 1:1308566/150‑1 (MQ=255) cGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTc < 2:2645370/150‑1 (MQ=255) ggTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTa > 1:5342902/1‑150 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 1:2615677/150‑1 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGGTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 2:5577645/150‑1 (MQ=255) gAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGc > 2:3522731/1‑150 (MQ=255) aGTGTGCAGGATAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTAtt < 1:137711/150‑1 (MQ=255) gtgtGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTg < 1:2283775/150‑1 (MQ=255) gtgtGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTg < 2:490470/150‑1 (MQ=255) tgtgCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCACCCTAGCGGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTgg > 2:2057794/1‑150 (MQ=255) tgCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGgag < 2:1020266/150‑1 (MQ=255) gCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGgaga > 1:3128745/1‑150 (MQ=255) aagCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAAc > 2:3264558/3‑150 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg > 1:3832848/1‑150 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg < 1:3668578/150‑1 (MQ=255) tAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGa < 2:4777910/150‑1 (MQ=255) aGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGAt < 2:4463685/150‑1 (MQ=255) ccACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGtct > 2:4246419/1‑150 (MQ=255) aaCCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGtt > 2:2196970/1‑150 (MQ=255) aCCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTc < 1:3759642/150‑1 (MQ=255) cgcagCGGGCAACTTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCg < 1:645176/112‑1 (MQ=255) gcagCGGGCAACTTTGCCCGCCGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATc > 2:3998949/4‑102 (MQ=255) gcagCGGGCAACTTTGCCCGCCGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATc < 1:3998759/99‑1 (MQ=255) aGGTGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCt < 1:4476612/150‑1 (MQ=255) aGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTTGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCt < 2:2438674/150‑1 (MQ=255) aGGCGGGCAAAGTTGCCCGCTGCGGTGGCAGTTGGCGTACTTGCTATCTGCAACCTAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGACCAGGATGTCTCGTTCGCt > 1:3067183/1‑150 (MQ=255) agCGGGCAACTTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTg > 1:3332606/2‑150 (MQ=255) gCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGc < 2:844339/150‑1 (MQ=255) cGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGcc < 2:2552104/150‑1 (MQ=255) gCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGAc > 2:3163459/1‑150 (MQ=255) aaaGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACgg > 2:3968351/1‑150 (MQ=255) | TGGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG > NC_002947/1943963‑1944259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |