| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,944,113 | G→T | 5.1% | intergenic (‑66/‑113) | PP_1738 ← / → PP_1739 | hypothetical protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,944,113 | 0 | G | T | 5.1% | 929.3 / 25.9 | 274 | intergenic (‑66/‑113) | PP_1738/PP_1739 | hypothetical protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (127/132); new base T (7/7); total (134/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
GGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG > NC_002947/1943964‑1944259 | ggCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAg > 2:2810777/1‑150 (MQ=255) aGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTg < 1:3760176/150‑1 (MQ=255) gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGccc > 2:1563189/1‑150 (MQ=255) gTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGccc > 2:5376714/1‑150 (MQ=255) tCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCg > 2:1431629/1‑150 (MQ=255) cGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAACTTTGCCCGc < 2:4122592/150‑1 (MQ=255) gATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCt > 2:3935953/1‑150 (MQ=255) atCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCg < 1:1634260/150‑1 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAACTTTCCCCGcctggtt < 2:1516306/150‑7 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt < 1:536436/150‑1 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt < 1:4074810/150‑1 (MQ=255) cccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTACAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGt < 2:2708804/150‑1 (MQ=255) ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTg > 1:1591540/1‑150 (MQ=255) ccGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTg < 2:3309718/150‑1 (MQ=255) cgcgCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTgg > 1:5218818/1‑150 (MQ=255) cgcgCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTgg > 1:2348142/1‑150 (MQ=255) gcTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCAt > 1:5375909/1‑150 (MQ=255) tGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCAttt < 2:351266/150‑1 (MQ=255) gAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTg < 2:5206127/150‑1 (MQ=255) aaGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTgg < 1:3639999/150‑1 (MQ=255) aGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGc < 2:759105/150‑1 (MQ=255) gCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTAc > 2:2283775/1‑150 (MQ=255) acaGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTg > 1:3200315/1‑150 (MQ=255) aGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCt > 1:4919539/1‑150 (MQ=255) aTGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCt > 2:3668578/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 2:3759642/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 1:1861302/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 1:5045801/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 2:1242707/1‑150 (MQ=255) tGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTg > 2:4705150/1‑150 (MQ=255) aGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCa > 2:3051459/1‑150 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATa > 2:1597126/1‑150 (MQ=255) gCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATa < 1:4096755/150‑1 (MQ=255) ccGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTg > 1:660089/1‑150 (MQ=255) cGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGc > 1:2947711/1‑150 (MQ=255) gCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCgg < 1:4024421/150‑1 (MQ=255) cAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGATCGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTTCCCGCTGCGGTGGCATTTGGCGTTCTTGCTATCTGCAACATTGCTGCCggg < 2:2476163/150‑1 (MQ=255) aGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCgggg > 1:4963190/1‑150 (MQ=255) gggCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgt > 2:1001079/1‑150 (MQ=255) gggCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGgt < 1:3755579/150‑1 (MQ=255) aGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGa < 1:2069125/150‑1 (MQ=255) aGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGa < 1:3800997/150‑1 (MQ=255) gCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTGTCTGCAACATAGCTGCCGGGGTGTGAt < 2:1064816/150‑1 (MQ=255) gcgcAAAGATCGAAGCATGTAATCCCCCAACAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGc < 2:2431622/150‑1 (MQ=255) gcgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGc < 1:4668293/150‑1 (MQ=255) gcgcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGc < 1:336632/150‑1 (MQ=255) gcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCt > 1:1188541/1‑150 (MQ=255) gcAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCt > 1:3173580/1‑150 (MQ=255) aaaGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTa < 1:1464050/150‑1 (MQ=255) aaaGATCGAAGCATGTAATCCACCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTa < 1:1399536/150‑1 (MQ=255) aGATCGAAGCATGTAATCCCCCAAAAGCACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCCCCACCAGGCGGGCAAAGTGGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATCGCTGCCGGGGTGTGATTTTGCCTTAgt < 1:769899/150‑2 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg < 2:3617073/150‑1 (MQ=255) gAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACgg < 2:5335996/150‑1 (MQ=255) aaGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACggg < 2:1630290/150‑1 (MQ=255) aGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGc < 1:1056739/150‑1 (MQ=255) cATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCAt > 2:4370440/1‑150 (MQ=255) tGTAATCCCCCAAAAGAACGCATGGTCGAGCAGTGTGCTGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATaa < 1:4748244/150‑1 (MQ=255) gTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAg < 1:4382933/150‑1 (MQ=255) aaTCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCg > 1:1990953/1‑150 (MQ=255) ccccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCa > 2:1668168/1‑150 (MQ=255) ccccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCa > 1:2431794/1‑150 (MQ=255) cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt > 1:1502097/1‑150 (MQ=255) cccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCAt > 2:2927426/1‑150 (MQ=255) ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGGTTTTGCCTTAGAAACGGGCATaa > 1:928082/1‑141 (MQ=255) ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATg > 2:5443702/1‑150 (MQ=255) ccAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGGGTGAGATTGCCGTAGAAACGGGCATAAGCGATCATg > 1:1019513/1‑150 (MQ=255) aaaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGAt < 1:1308566/150‑1 (MQ=255) aaGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCATAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATg < 2:4454795/150‑1 (MQ=255) gCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCg > 2:5000354/1‑150 (MQ=255) ggTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTa > 1:5342902/1‑150 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 1:2734918/150‑1 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 2:2034726/150‑1 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 1:2072650/150‑1 (MQ=255) gTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGGTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTAc < 2:5577645/150‑1 (MQ=255) gCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTa < 1:2290041/150‑1 (MQ=255) aGTGTGCAGGATAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTAtt < 1:137711/150‑1 (MQ=255) gtgtGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTg < 2:5524780/150‑1 (MQ=255) tgtgCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTgg < 1:909392/150‑1 (MQ=255) cAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGaa < 1:853693/150‑1 (MQ=255) aagCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAAc > 2:3264558/3‑150 (MQ=255) aGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAAc > 1:5626616/1‑150 (MQ=255) ggCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACa < 2:2170380/150‑1 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg > 1:2261154/1‑150 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg < 1:3668578/150‑1 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg < 2:2507505/150‑1 (MQ=255) gCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAg > 1:3832848/1‑150 (MQ=255) tAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGa < 2:4777976/150‑1 (MQ=255) aGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGAt > 1:2907657/1‑150 (MQ=255) gACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGt > 1:5427906/1‑150 (MQ=255) ccACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGtct > 2:4246447/1‑150 (MQ=255) caccgcagCGGGCAACTTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGt > 2:2068413/8‑150 (MQ=255) aCCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTc > 2:4245428/1‑150 (MQ=255) gcagCGGGCAACTTTGCCCGCCGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATc < 1:3998759/99‑1 (MQ=255) gcagCGGGCAACTTTGCCCGCCGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATc > 2:3998759/4‑102 (MQ=255) aGGTGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCt < 1:4476612/150‑1 (MQ=255) aGGCGGGCAAAGTTGCCCGCTGCGGTGGCAGTTGGCGTACTTGCTATCTGCAACCTAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGACCAGGATGTCTCGTTCGCt > 1:3067183/1‑150 (MQ=255) gCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGc < 2:844339/150‑1 (MQ=255) cGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGcc < 2:2552104/150‑1 (MQ=255) gCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGAc > 2:3163459/1‑150 (MQ=255) cAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACg > 2:4572289/1‑150 (MQ=255) | GGCAGCGTCGATATCCCGCGCTGAAGCGGCCACAGCCATGAGCAAGCTGCCGAGCAGGGCAGCGAGGCGCAAAGATCGAAGCATGTAATCCCCCAAAAGAACGCAAGGTCGAGCAGTGTGCAGGCTAGGACCACAACCAGGCGGGCAAAGTTGCCCGCTGCGGTGGCATTTGGCGTACTTGCTATCTGCAACATAGCTGCCGGGGTGTGATTTTGCCTTAGAAACGGGCATAAGCGATCATGGATGCTTTCGATTACCGCTATTGGAGAACAGGATGTCTCGTTCGCTGCCGACGG > NC_002947/1943964‑1944259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |