| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,076,188 | A→T | 6.2% | intergenic (+148/+79) | PP_1846 → / ← PP_1847 | group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,076,188 | 0 | A | T | 6.2% | 547.6 / 4.3 | 175 | intergenic (+148/+79) | PP_1846/PP_1847 | group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base A (73/88); new base T (3/11); total (76/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.81e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGT > NC_002947/2076039‑2076337 | gAACCGCCGTGTACGGAACCGTACGCACGGTGATGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGa < 2:5209312/150‑1 (MQ=255) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGAt < 2:4673525/150‑1 (MQ=255) aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGAt > 1:2165993/1‑150 (MQ=255) aCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATg < 2:604187/150‑1 (MQ=255) cgccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGc < 2:2087977/150‑1 (MQ=255) cgccgTGTACGGAACCGTACGCACGGTGGGGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGc > 1:4077631/1‑150 (MQ=255) gtACGGAACCGTACGCACGCTGGAGAGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCCTTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCATCACCGTGGTGGATGGCACGGGc < 1:2303907/150‑1 (MQ=37) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCt > 2:995113/1‑150 (MQ=255) tACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCt > 2:4834680/1‑150 (MQ=255) cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTc < 1:5543074/150‑1 (MQ=255) cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTc < 2:4179756/150‑1 (MQ=255) gAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGc < 2:5507207/150‑1 (MQ=255) gAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGc < 1:679494/150‑1 (MQ=255) aCCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGccc < 2:310663/150‑1 (MQ=255) aCCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGccc < 2:4416163/150‑1 (MQ=255) aCCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGccc > 1:3238794/1‑150 (MQ=255) aCGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCGAAGCCCgtgcc < 1:2239926/150‑3 (MQ=255) cGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCgtgtca < 1:3069254/150‑3 (MQ=255) aCGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTcgcg > 2:2548760/1‑150 (MQ=255) gtaaagattgtagtcactggatgccgtttgctttttttgggagcaactgtcttgctcaatttctaacagctggcgcgatccctgggggagcgggCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCgg < 2:2974239‑M2/56‑1 (MQ=255) gtaaagattgtagtcactggatgccgtttgctttttttgggagcaactgtcttgctcaatttctaaaagctggcgcgatccctgggggagcgggCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCgg < 2:1757265‑M2/56‑1 (MQ=255) gtaaagattgtagtcactggatgccgtttgctttttttgggagcaactgtcttgctcaatttctaaaagctgacgcgacccgtgtgggagcggcCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCgg < 2:3133391‑M2/56‑1 (MQ=255) cGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACCCCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCgg < 2:4726031/150‑1 (MQ=255) cGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCgg < 1:5094484/150‑1 (MQ=255) ggtggtGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCggg < 2:1165599/150‑1 (MQ=255) ggtgTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑aa < 2:387597/150‑1 (MQ=255) ggcaccgcgtaccgctcggctttcggcttcgatcagcttctagcttgccggggccgctctgcggccctttcgcgacctgtggcAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAg > 1:5379836‑M1/84‑150 (MQ=255) tgtagtcactggatgccgtttgctttttttgggagcaactgtcttgctcaatttctaaaagctggcgcgacccgtgtgggagcggcCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGccc < 1:4023417‑M2/64‑1 (MQ=255) gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCg > 2:4785587/1‑150 (MQ=255) gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCg < 1:4194005/150‑1 (MQ=255) agagGACGGCGTGTGTGAATCCGCCTCCTACTCGTTTTTCCGGGCCTTTGGGGCTGCTGTGCAGCCCTTCGCGACAGACGCGTGCTTGGCGGCGAAGACAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑TAGCCCGc < 2:2695734/150‑1 (MQ=25) agagGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTT‑GCCCGCGAACACGGGCGAAGCCCgt < 2:5046752/150‑2 (MQ=38) agGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCtt < 1:4713029/150‑2 (MQ=255) cacgggatgccgtttgctttttttgggagcaactgtcttgctcaatttctaaaagctggcgcgatccctgggggagcggcCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTccc < 2:439017‑M2/70‑1 (MQ=255) gcggGTGTTAACCCGCCTCCTACTCGTTTTGCTGGGCCATGGGGGCTGCTGTGCAGCCCACCGCGACACACGGGGGCTTGCCCGCGAAGCCAACCCCGGGGTGGAGGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAg < 2:2356523/150‑1 (MQ=21) tgtgAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTcgc > 1:2870291/1‑150 (MQ=255) tttcggcttcgatcagcttctagattgccggggccgctctgcggccctttcgcgacctgtgggAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTcgcg < 1:2762771‑M1/61‑1 (MQ=255) tgAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGa > 2:3369905/1‑150 (MQ=255) aaTCCGCCTCCTACTCTTTTTTCCGGGCCATGGGGGCTGCTGTGCAGCCCTGCGCGACACACGGGGGCTTGCCCGCGAAGCCAACACCGTGGTGGTTGGCAGGGGCTTCGCCCGTGTTCGCGGGC‑ATGCCCGCTCCCACAGGTCGCGaaa < 1:1720122/150‑1 (MQ=21) aTCCGCCTCCTCCTCGATTTTCCGGGCCTTTGGGGCTGCTGGGCAGCCCATCGCGACACACGCGGGCTTGCCCGCGAAGCAAACACCGGGGTGGTGGGCACGGGCTCCGCCGGTGTTCGCGGGA‑ACGCCCGCTCCCACAGGTCGCGAAAg < 1:387659/150‑1 (MQ=25) aTCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGACGCCAACCCCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAg < 2:2794625/150‑1 (MQ=255) tCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGCGC‑AAGCCCGCTCCCACAGGTCGCGAAAgg < 1:4514252/150‑1 (MQ=255) cctcctACTCTATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACATGCGGGCTTGCCCGTGAAGCCAACACCGTGGTGGTTGGCACGGGCTTGGCCCGTGTTCGCGGGA‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCg < 2:2513095/150‑1 (MQ=255) cctcctACTCTATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGGTTGCCCGCGAAGCCAACACCGTGGTGGATGGCAGGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCg < 2:3067536/150‑1 (MQ=255) cctcctACTCGATTTTCCGGGCCATGGGGGCTGCTGTGCAGCCCATCGCGACACACGCGGGCTTGCCCGCGAAGCCAACCCCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCg < 2:2197924/150‑1 (MQ=255) tcctACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCa > 1:2870999/1‑150 (MQ=255) ctACTCGATTTTCTGGGCCTTTGGGGCTGCTGTGCAGCCCATCGCGACACAAGGGGGCTTGCCCGCGAAGCCAACACGGTGGTGGATGGCACGGGGTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCaga < 2:3853315/150‑1 (MQ=37) tACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCagag < 2:2722547/150‑1 (MQ=255) cTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGTCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCg > 2:5599553/1‑150 (MQ=255) tCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCg < 1:4611388/96‑1 (MQ=255) tCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGaa < 2:5485600/135‑1 (MQ=255) gATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGcc > 2:5292540/1‑150 (MQ=255) ttttCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACATGCGGGCTTGCCCGCGAAGCCAACCCCGTGGTGTATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGcccc < 2:135711/150‑1 (MQ=255) ttttCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACACGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCTCTGCGGccct < 2:5143576/150‑2 (MQ=255) tCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGc > 1:5561355/1‑150 (MQ=255) ggCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATc > 1:2650921/1‑150 (MQ=255) ggCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATc > 2:4878260/1‑150 (MQ=255) gCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCt > 2:5499080/1‑150 (MQ=255) ctttGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGACGCCACCCCCGTGGGGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAg < 2:4488975/148‑1 (MQ=255) cATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAg > 1:1240695/1‑150 (MQ=255) cATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAg > 2:1710248/1‑150 (MQ=255) aTTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCACTCTAGa > 1:104658/1‑150 (MQ=255) aTTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGa > 1:2622297/1‑150 (MQ=255) tgggggCTGCTGTGCAGCCCATCGCGACACACGGGGGCTTGCCGGCGAAGCCAACCCCTTGGTGTTTGGCAGGGGTTTCGCCCGTGTTCGCGGGC‑ACGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGaa < 1:2251501/148‑1 (MQ=37) tgggggCTGCGGGGCGGCCCATCGCGACACACGGGGGCTGGCCCGCGACGCCAACCCGGTGGTGGATGGCAGGGGCTTCGCCCGTGTCCGCGGGC‑ACGCCCGCTCCCCCAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGaa < 1:5400042/148‑1 (MQ=255) gctgctGTGCAGCCCATCGCGACACACGGGGGCTTGCCCGCGACGCCAACACCGTGGTGTTTGGCCCGGGCTTCGCCCGTGTTCGCGGGC‑ACGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGa < 1:3732997/150‑1 (MQ=37) gCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagcc > 1:4822240/1‑150 (MQ=255) cccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaa > 2:3448881/1‑150 (MQ=255) ccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGa > 1:1256583/1‑48 (MQ=255) ccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGa < 2:1256583/48‑1 (MQ=255) aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagcc > 2:1058268/1‑150 (MQ=255) aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagcc > 1:1784520/1‑150 (MQ=255) cgctccacaAGCGGGCTTGCCCGCGAAGCAACCACGGTGGTGGTTGGCTGGGGCTTCGCCCTTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagccga < 1:5016434/145‑1 (MQ=37) cgccACACATGCGGGCTGGCCCGCCAACCCAACACCTTGGTGGATGCCACGGGCTGCCCCCGGGTGCGCGGCC‑ACGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagccga < 1:5016348/150‑1 (MQ=255) gcgACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAg > 1:1995260/1‑150 (MQ=255) cgACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc > 2:4758232/1‑150 (MQ=255) gaaacaAGCGGGCTTGCCCGCTAAGCAAAAACCGTTTTGTATGGCACGGGCTTCGCCCGTTTTCGCGGCA‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCg < 1:1777520/147‑1 (MQ=255) acacAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGc < 1:5486262/73‑1 (MQ=255) GGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGt > 2:4601912‑M1/1‑150 (MQ=255) TTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGccc < 2:4613958‑M1/150‑1 (MQ=255) CCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt < 1:3496896‑M1/150‑1 (MQ=255) cgctacgCCAACCGCGTGGTGTTTGGCTCGGGGTCCGCCGTTGTTGGCGGGC‑ACGCCCGCTCCCACCGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTgg < 1:4296585/144‑1 (MQ=255) CGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTgg < 1:892715‑M1/150‑1 (MQ=255) CGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTgg < 1:5335748‑M1/150‑1 (MQ=255) GCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGa < 1:839077‑M1/150‑1 (MQ=255) GAAGCCAACCCCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAAc > 2:3276498‑M1/1‑150 (MQ=255) AAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACa < 1:5302242‑M1/150‑1 (MQ=255) gCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAgg < 1:3280613/150‑1 (MQ=255) caccccggtggtggtgGGCAGGGGCTCCGCCGGGTTGCGGGGGA‑ACCCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTa < 1:4220130/143‑1 (MQ=255) cAACCCCGTGGTGGATGGCAGGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTa < 2:4020393/150‑1 (MQ=255) cAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTa > 1:1508538/1‑150 (MQ=255) aaCACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCACTCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAg > 2:4341611/1‑150 (MQ=255) aaCACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGCAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAg > 2:5091827/1‑150 (MQ=255) aaCACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACTGGTAg > 1:2461644/1‑150 (MQ=255) cacCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGtt > 1:563591/1‑150 (MQ=255) cccGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTa < 2:1690351/149‑1 (MQ=255) cGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATc > 1:5428424/1‑150 (MQ=255) gATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCCgg < 2:5563506/150‑1 (MQ=255) gATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAgg < 2:2742398/150‑1 (MQ=255) aTGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGt < 2:2165993/150‑1 (MQ=255) | GAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCTGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGC‑AAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGT > NC_002947/2076039‑2076337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |