| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,109,894 | G→C | 6.4% | intergenic (‑19/+22) | PP_1879 ← / ← PP_1880 | hypothetical protein/outer membrane autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,109,894 | 0 | G | C | 6.4% | 729.2 / 30.4 | 218 | intergenic (‑19/+22) | PP_1879/PP_1880 | hypothetical protein/outer membrane autotransporter |
| Reads supporting (aligned to +/- strand): ref base G (106/97); new base C (8/6); total (114/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 218 total aligned reads displayed.
TTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCGA > NC_002947/2109747‑2110040 | ttCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCa > 1:926223/1‑150 (MQ=255) aaCATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTg > 1:3638251/1‑150 (MQ=255) aCATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTgg > 1:4682927/1‑150 (MQ=255) cATCGTCCACCCCGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGc < 2:4476073/150‑1 (MQ=255) cATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGc < 1:1399123/150‑1 (MQ=255) cATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGc > 1:3792983/1‑150 (MQ=255) aTCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGcc > 1:3164223/1‑150 (MQ=255) aTCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGcc > 1:5527738/1‑150 (MQ=255) tCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCt > 1:580265/1‑150 (MQ=255) gTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTc < 2:2983784/150‑1 (MQ=255) tCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTcc < 1:1178581/150‑1 (MQ=255) tCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTcc < 1:1266623/150‑1 (MQ=255) accacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTcc < 1:3441031/147‑1 (MQ=255) accacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTc > 1:1060460/1‑150 (MQ=255) cacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGt > 1:4277946/1‑150 (MQ=255) cacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGt > 2:5192118/1‑150 (MQ=255) cacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTCCCttct < 1:3155039/150‑4 (MQ=255) acGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGtt < 1:2702163/150‑1 (MQ=255) acGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGtt < 1:4096738/150‑1 (MQ=255) acGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGtt < 1:1465658/150‑1 (MQ=255) gCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTCCCttctgca < 2:3558128/150‑7 (MQ=255) gCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTGGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTc < 1:419101/150‑1 (MQ=255) ttGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCtt > 1:4739006/1‑150 (MQ=255) ttGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCtt < 1:5433019/150‑1 (MQ=255) tGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCttt < 2:2079283/150‑1 (MQ=255) gTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTAc < 1:2520374/150‑1 (MQ=255) aCGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCa < 1:2058933/150‑1 (MQ=255) aCGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCa < 2:2327248/150‑1 (MQ=255) gTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGtt > 2:5110944/1‑150 (MQ=255) gggggACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTaa < 1:677611/150‑1 (MQ=255) gACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACggg < 1:2972664/150‑1 (MQ=255) gACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACggg > 2:4624176/1‑150 (MQ=255) aCAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGgc < 2:2805677/150‑1 (MQ=255) cAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGgcg > 2:2471904/1‑150 (MQ=255) aaGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGgcgc < 2:2167171/150‑1 (MQ=255) gagagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCg > 2:3107985/1‑150 (MQ=255) gagagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCg > 1:3868520/1‑150 (MQ=255) gagagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCg < 1:4624176/150‑1 (MQ=255) agagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGa > 2:3967711/1‑150 (MQ=255) gagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGAc < 1:564794/150‑1 (MQ=255) agGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGc > 1:3966666/1‑111 (MQ=255) gCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCt > 1:3329806/1‑150 (MQ=255) gCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCt > 1:4216896/1‑150 (MQ=255) gAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCAc > 1:447929/1‑150 (MQ=255) gAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCAc > 1:1838213/1‑150 (MQ=255) gAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCAc < 1:2307573/150‑1 (MQ=255) tCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGcc > 1:4523782/1‑150 (MQ=255) cAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGcccc > 1:2868668/1‑150 (MQ=255) aGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCa > 1:4811916/1‑150 (MQ=255) ttCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATg < 2:35098/150‑1 (MQ=255) ttCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATg > 1:4297480/1‑150 (MQ=255) tGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCaa < 1:4621794/150‑1 (MQ=255) ggAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAg < 1:5200199/150‑1 (MQ=255) cTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTtgct < 1:2675547/150‑1 (MQ=255) ggAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGt > 2:1363075/1‑150 (MQ=255) cTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTc > 1:154937/1‑107 (MQ=255) cTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTaa > 2:4740775/1‑146 (MQ=255) cTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGa > 1:3161339/1‑150 (MQ=255) ttGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGaa < 2:3616680/150‑1 (MQ=255) ttGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGaa > 1:5044347/1‑150 (MQ=255) tGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAg > 1:5216844/1‑150 (MQ=255) tCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCg > 2:3145716/1‑150 (MQ=255) tgtCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGt > 1:1821627/1‑150 (MQ=255) tgtCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGt > 1:5566105/1‑150 (MQ=255) tgtCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTAGCTGCCATGGCTGTAATCGAAGTCGGCGt > 2:5381383/1‑150 (MQ=255) tCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCGTGCTGCCATGGCTGTAATCGAAGTCGGCGTgg > 2:4040414/1‑150 (MQ=255) tCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGcg > 2:634842/1‑149 (MQ=255) tCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGcc > 2:5281909/1‑150 (MQ=255) gTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTg > 1:5245491/1‑150 (MQ=255) tCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGc < 2:4277946/150‑1 (MQ=255) cATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGtt < 2:3785701/69‑1 (MQ=255) aTCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAt < 2:1109045/150‑1 (MQ=255) aTCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAt < 1:866213/150‑1 (MQ=255) ctcCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAttt > 1:4822710/1‑150 (MQ=255) ctcCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAttt < 2:329044/150‑1 (MQ=255) ctcCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAttt > 2:5100276/1‑150 (MQ=255) tcCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAtttt > 2:1913786/1‑150 (MQ=255) cATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 1:3534462/150‑1 (MQ=255) cATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 2:4682927/150‑1 (MQ=255) cATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 1:1660203/150‑1 (MQ=255) cATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 2:234684/150‑1 (MQ=255) atctgtCACGCATGAAAGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAACTCGGCGTGGGCCTGCCATTTTTCg < 2:574158/147‑1 (MQ=255) gtgtCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCGTGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGcc < 2:2844863/150‑1 (MQ=255) tgtCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGccc < 1:2542930/150‑1 (MQ=255) tCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCa < 2:2529896/150‑1 (MQ=255) cACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAg < 1:3692408/150‑1 (MQ=255) cGCATTAATGCAGAAGGGAAGGCTCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTTCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGc < 1:3855051/150‑1 (MQ=255) tGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGAcc > 1:4715593/1‑150 (MQ=255) tGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCa < 2:1813749/150‑1 (MQ=255) aacgagggaaggCCAATGCGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCAcc > 2:3385190/5‑150 (MQ=255) acgagggaaggCCAATGCGCCTTCCCTTGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGc < 1:3087762/129‑1 (MQ=255) aGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACTGCCAccc > 2:30/1‑150 (MQ=255) aGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCAccc > 2:4804280/1‑150 (MQ=255) gaagggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCAcccc > 2:1536983/1‑150 (MQ=255) gaagggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCAcccc > 2:1802873/1‑150 (MQ=255) gagggaaggCCAATGCGCCTTCCCTTGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCt > 1:2598427/2‑150 (MQ=255) ggaaggCCAATGCGCCTTCCCTTGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCa > 1:1933080/1‑150 (MQ=255) aaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCAcc < 2:2548499/150‑1 (MQ=255) aggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCg > 1:907516/1‑150 (MQ=255) aggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCg > 2:4113131/1‑150 (MQ=255) | TTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCGA > NC_002947/2109747‑2110040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |