| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,147,432 | A→C | 10.0% | R726R (AGG→CGG) | PP_1897 → | DNA internalization‑related competence protein ComEC/Rec2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,147,432 | 0 | A | C | 10.0% | 486.0 / 2.0 | 198 | R726R (AGG→CGG) | PP_1897 | DNA internalization‑related competence protein ComEC/Rec2 |
| Reads supporting (aligned to +/- strand): ref base A (96/69); new base C (2/22); total (98/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.26e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 200 total aligned reads displayed.
TGATTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTATT > NC_002947/2147283‑2147580 | tGATTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTa > 2:506044/1‑150 (MQ=255) gATTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAg > 1:1807956/1‑150 (MQ=255) aTTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAgg > 2:1265473/1‑150 (MQ=255) aTTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAgg > 1:592671/1‑150 (MQ=255) tttCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAggg > 1:791848/1‑150 (MQ=255) ttCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCTGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGTGGGGGCTTTGGGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAgggg < 2:2721702/150‑1 (MQ=255) cgcgGGGGCGCAACACCAGCTACGGGCACCCGCACGTGCAGGTGGTCGCGCGGTATGGGCGGCATGGGGGGGTGAGGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGc < 2:2980966/150‑1 (MQ=255) gcgcAACAACTGCTTCGGGCACCCGCAGGTGCTGGTGGTCGAGCGTTTTGGGCGGCTTGGGGTGGTTATGAATGATACGGGGGAGGAGGGGGCATTGGGGTTGGTGCTGGGGCGGCTTGGGGTAGTCGAGGGGGTTAGGGGGCAgcggcg < 2:82924/150‑1 (MQ=255) gcgcAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAgcggcg > 1:4603543/1‑150 (MQ=255) gcgcAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTA‑GGTGCAGcggcgg > 2:2075534/1‑150 (MQ=255) aacaacAGCTTCGGGCACCCGCACGTGCTGGTGGTCTAGCGTTTTGGGCGGCTTGGGGTTGTTATGATTGATACGGCGGTGGTGGGGGCATTGCGGTTGGTGCTGGGGCGGCTTGGGTTATTCGTGGGGTTTAGGGGGCAGCGGCGGTTc < 2:2882207/150‑1 (MQ=255) aaaactGCTTGGGGCACCGGCAGGTGCTGGGGGTGTCGGGTTTTGGGGGGATGGGGGTGTTTTTGATTGATAGGGGGGTGGTGGGGGATTTGGGGTTGGTGGTGGGGCGGCTTGGGGTTGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCt < 1:4833060/148‑1 (MQ=255) caacaGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTg > 2:5506740/1‑150 (MQ=255) actgCTTGGGGCACCCGCACGTGCTGGTGGTCGAGCGGTTTGGGCGGCTTGGGGTGGTTATGCTTGATACGGCGGTGGAGGGGGCATTGGGGTTGGTGCTGGGGCGGCTTGGGTTAGTCGTGGGGGTTAGGGGGCAGCGGCGGTTCTGGc < 2:2529082/147‑1 (MQ=255) caGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCg > 2:4374387/1‑150 (MQ=255) cgCTTCGGGCACCCGCACGTGCCGGTGGTCGAGCGGTATGGGCGGCATGGGGGGGTGAGGCATGAGAGGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCgg < 2:3323508/149‑1 (MQ=255) ctcgaccACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGGTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGtt > 2:5106820/7‑150 (MQ=255) tCGGGCCCCCGCAGGTGCTGGTGGTCGCGGGTTTTGGGGGGCTTGGGGTGGTTATGCTTGATAGGGCGGTGGTGGGGGCTTTGGGGTTGGTGGTGGGGGGGCATGGGGTAGCCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTc < 1:1570645/150‑1 (MQ=255) gggCCCCCGCCGGTGCTGGGGGTCGCGGGGTTGGGGGGGCTGGGGGTGGTGTTGATTTATCGGGGGGTGGTGGGGGATTGGCGGTGGGTGCTGGGGCGGCTTGGGGTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGa < 1:4162819/150‑1 (MQ=255) gggCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGa > 2:4992666/1‑150 (MQ=255) gaccACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGa > 2:1026576/4‑150 (MQ=255) gCACCCGCACGTGCTGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGAGGCATGATAGGGCGGTGGCGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTCGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAgg < 2:584401/150‑1 (MQ=255) gCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCAGTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAgg > 2:3250175/1‑150 (MQ=255) ccACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAgg > 1:3448531/2‑150 (MQ=255) cccccGCACGTGCCGGGGGTCGCGCGGGTGGGGCGGCATGGGGGGGTGATGCCTGAGCCGGCGGAGGAGGGGGCATTGGGGTTGGTGCGGGGGCGGCAGGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAggg < 2:5553623/148‑1 (MQ=255) cACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAggg > 1:4646648/1‑150 (MQ=255) cACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAggg > 1:2928625/1‑150 (MQ=255) cACCTGCACGTGCGGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAggg > 1:865894/1‑150 (MQ=255) cccGCACGTGCCGGTGGGCGCGGGGTTTGGGCGGCATGGGGTGGTTTTGCATGATACGGGGGAGGAGGGGGCATTGGGGTTGGTGCTGGGGCGGCTTGGGGTTGTCGAGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGa < 2:1924095/150‑1 (MQ=255) cccGCACGTGCAGGTGGTCGACCGGTATGGCCGGAATGGGTTGGTTATGAATGATACGGCGGAGTAGGGGGCATTGCGTTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCAGGTTCGAGGGGa < 2:4293520/150‑1 (MQ=255) ccGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAg > 1:984799/1‑150 (MQ=255) ccGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGGGAGGGGGCAGCGGCGGTTCTGGCGGGTGCGAGGGGAg > 2:4718830/1‑150 (MQ=255) gCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTg > 1:3395000/1‑150 (MQ=255) caggTGCTGGTGGTCGCGCGGTATGGGCGGCATGGGGTGGTGATGCATGATCGGGGGGTGGTGGGGGCATTGGGGTTGGTGGTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTga < 1:4199556/147‑1 (MQ=255) cACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTga > 2:2455946/1‑150 (MQ=255) aggTGCTGGTGGTGGTGGGTTTTGGGGGGCTTGGGGTGGTGATGCTTTTTCGGGGGGTGGCGGGGGCTTTGGGGTTGGTGGTGGGGGGGCTTGGGGTAGTCGAGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTgag < 1:3244162/148‑1 (MQ=255) aCGTGCTGGTGGTCGAGCGGTCTGGGCGGCTGGGGGGGGTGATGCTGGAGCGGGCGGAGGAGGGGGCTTTGCGGTTGGTGCTGGGGCGGCAGGGGGTCGTCGCGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTgag < 2:70242/150‑1 (MQ=255) gtggtCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTgaggcagaggc > 1:3724291/1‑150 (MQ=255) gtggtCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTgaggcagaggc > 1:384861/1‑150 (MQ=255) ggtCGCGCGGTAGGGGCGGCTGGGGGTGGTTTTGCTTGATCGGGGGGCGGTGGGGGCATGGCGGTTGGTGCGGGGGCGGCTGGGGGTCGGCGCGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGaggcagaggcag < 1:4461358/150‑1 (MQ=255) gtCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGaggcagg > 2:3900797/1‑150 (MQ=255) gtCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGaggcagg > 1:1454028/1‑150 (MQ=255) gtCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGaggcagg > 2:1553689/1‑150 (MQ=255) caGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCAt > 2:387708/2‑150 (MQ=255) gggtttgggggggCTTGGGGTGTTGTTGATTGATCGGGGGGTGGTGGGGGATTTGGGGTTGGTGGTGGGGGGGATTGGGGTTGTGGTGGGGTTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCt < 1:2574010/143‑1 (MQ=255) gCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCt > 1:5317882/1‑150 (MQ=255) ggttggggCGGCCTGGGGTGGTGCTGCTTGATCCGGGGGCGGCGGGGGCTTTGGGGTTGGGGGTGGGGCGGCTTGGGGTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGc < 2:4856830/145‑1 (MQ=255) ggcggcAGGGGGGGGTGATGCATGATCCGGCGGTGGCGGGGGCATTGCGGTTGGTGCGGGGGCGGCAGGGGGTAGTCGAGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGccc < 2:5401428/150‑1 (MQ=255) gcggcCTGGGGTGGTGATGCTTGATACGGCGGAGGCGGGGGCATTGCGGTTGGTGCTGGGGCGGCTTGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCa < 2:4127648/150‑1 (MQ=255) aTGGGGTGTTGATGCTTTATCGGGGGGTGTTGGGGGCATGGGGTTTGGGGGGGGGGCGGATGGGGGTCGCGGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGAccc < 1:5066229/150‑1 (MQ=255) gggTGGTGTTGAATGTTACGGGGGTGGAGGGGGATTTGGGGTTGGTGCTGGGGCGGCTTGGGGTTGTCTCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGAGCCCaa < 2:3618194/150‑1 (MQ=255) gggTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCaa > 2:5248497/1‑150 (MQ=255) gtggtgATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAAtt > 1:5010937/1‑150 (MQ=255) gtgATGCATGATACGGCGGAGGCGGGGGCTTTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTccc < 2:4170147/150‑1 (MQ=255) tgATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCt > 2:2735747/1‑150 (MQ=255) ggcagCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGTGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCt < 2:1718741/146‑1 (MQ=255) gCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGAcc > 1:1877538/1‑150 (MQ=255) gCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGAcc > 2:532783/1‑150 (MQ=255) aTGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCtt > 2:4960862/1‑150 (MQ=255) tGATACGGCGGAGGAGGGGGCTTTGCGGTTGGTGCGGGGGCGGCATGGGGTAGTCGAGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTc < 2:399538/150‑1 (MQ=255) aTACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCgg < 2:5010937/150‑1 (MQ=255) gcggAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGACGAGGGGGTTAGGGGGCAGCGGCGGTTATGGCGGGTTCGAGGGGAGTGAGGAAGAGGCAGGCATCTGCCAGCCCAGACCACAATTAACTGACATACGGCAGAt > 1:1375280/1‑150 (MQ=255) gtggggggggCTTGGGGGTTGGTGGGGGGGCGGCTTGGGGTCGGCGCGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAg < 1:3822673/145‑1 (MQ=255) gtggaggGGGCTTTGCGGTGGGTGCTGGGGGGGATGGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAg < 2:5167026/148‑1 (MQ=255) gaggcgGGGGCTTTGGGGTTGGTGCTGGGGCGGCATGGGGTTGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAg < 2:984799/150‑1 (MQ=255) ggaggGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGcc > 1:3352823/1‑150 (MQ=255) gaggGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGccc > 1:2533786/1‑150 (MQ=255) gggggCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTc > 2:2403532/1‑150 (MQ=255) tggggtgtggtggGGGGGCGGCTGGGGGTTGCGGCGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGgcgcgc < 1:4473834/143‑1 (MQ=255) gtgggTGCGGGGGCGGCTTGGGGTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATg < 2:4876672/147‑1 (MQ=255) gTTGGTGCGGGGGGGGCTGGGGGTCGGGGGGGGGTTTGGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATg < 1:5269998/150‑1 (MQ=255) tGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTaga < 2:1207456/150‑1 (MQ=255) ggggggggGCTGGGGGTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGt < 1:4374419/148‑1 (MQ=255) gggCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTggc > 1:3317329/1‑150 (MQ=255) gggCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTggc > 2:1946550/1‑150 (MQ=255) gcggcATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTggcgg > 1:1041068/1‑150 (MQ=255) gggcGTGGGGTCGGCGTGGGGGTTTGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTggcggc < 1:1274488/149‑1 (MQ=255) gggcATGGGTCCGTCGCGGGGGTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTggcggc < 1:4794056/149‑1 (MQ=255) gcATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCt > 2:2008867/1‑150 (MQ=255) gcATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCt > 1:3612366/1‑150 (MQ=255) cATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCtt > 1:1906418/1‑150 (MQ=255) aTGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCttt < 2:3395000/150‑1 (MQ=255) aTGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCttt < 2:612891/150‑1 (MQ=255) gggTAGTCGCGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTc < 2:3451391/150‑1 (MQ=255) gggTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTc < 2:4415995/150‑1 (MQ=255) ggTCGTCGCGGGGGTTTGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTcc < 1:1770187/150‑1 (MQ=255) ggTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTcc > 2:1474271/1‑150 (MQ=255) tAGTCGAGGGGGTTA‑GGTGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGaa < 1:2075534/150‑1 (MQ=255) tgtgggggggtTTCGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGaa < 1:5170999/144‑1 (MQ=255) ggggggggggTTGGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAg < 1:1242220/145‑1 (MQ=255) gTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAg > 2:5342163/1‑150 (MQ=255) tCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAgg > 2:5569820/1‑150 (MQ=255) gAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGAACTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAgggg > 1:4617090/1‑150 (MQ=255) ggggTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGt > 1:2710445/1‑150 (MQ=255) ggggTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGt > 1:5532709/1‑150 (MQ=255) ggTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGttt < 2:4603543/150‑1 (MQ=255) gTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTa > 1:2012176/1‑150 (MQ=255) gTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTa < 2:3448531/150‑1 (MQ=255) tAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTAtt < 2:2180630/150‑1 (MQ=255) tAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTAtt < 2:3799993/150‑1 (MQ=255) | TGATTTCGCGGGGGCGCAACAACAGCTTCGGGCACCCGCACGTGCAGGTGGTCGAGCGGTATGGGCGGCATGGGGTGGTGATGCATGATACGGCGGAGGAGGGGGCATTGCGGTTGGTGCTGGGGCGGCATGGGGTAGTCGAGGGGGTTAGGGGGCAGCGGCGGTTCTGGCGGGTTCGAGGGGAGTGAGGCAGAGGCAGGCATCTGCCAGCCCAGACCCCAATTCCCTGACCTTCGGCAGATGAGCCCTCGGCGCGCCTATGGTAGAGTGGCGGCCTTTTTCCGAAGGGGCGTTTATT > NC_002947/2147283‑2147580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |