| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 198,367 | G→C | 5.1% | V1291V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 198,367 | 0 | G | C | 5.1% | 787.3 / 24.0 | 234 | V1291V (GTG→GTC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (107/115); new base C (8/4); total (115/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
CTTGATGCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAG > NC_002947/198218‑198515 | cTTGATGCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTg > 1:2851200/1‑150 (MQ=255) tGATGCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGAc < 2:125795/150‑1 (MQ=255) cTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCgg < 1:4205532/150‑1 (MQ=255) cTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTCACCGAAggggt < 1:4890065/150‑4 (MQ=255) tCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGt < 2:4542451/150‑1 (MQ=255) cATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTga < 1:5228398/150‑1 (MQ=255) cATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTga < 1:441931/150‑1 (MQ=255) tCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTgaga > 1:2436188/1‑150 (MQ=255) gCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCAc < 1:1674873/150‑1 (MQ=255) gCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCAc < 2:2593699/150‑1 (MQ=255) cAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTa < 1:2657701/150‑1 (MQ=255) aGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTac < 1:4005817/150‑1 (MQ=255) aCCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATc < 1:4724609/150‑1 (MQ=255) gCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTg > 2:5599790/1‑150 (MQ=255) cTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGa < 2:1206581/150‑1 (MQ=255) tACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAc > 2:3088000/1‑150 (MQ=255) tACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAc < 1:3616585/150‑1 (MQ=255) tACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAc < 1:3616292/150‑1 (MQ=255) cAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGAt > 2:2644808/1‑127 (MQ=255) aGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaa < 2:1977148/150‑1 (MQ=255) aGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaa < 2:398971/150‑1 (MQ=255) ccGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACaaa < 1:4962298/150‑1 (MQ=255) gggTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGa < 2:3140260/150‑1 (MQ=255) gggTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGa < 1:5433653/150‑1 (MQ=255) gTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCGCCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACg < 1:3286275/150‑1 (MQ=255) gCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGt > 1:4153877/1‑150 (MQ=255) cACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCt > 2:4027471/1‑150 (MQ=255) aCCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg > 1:3735610/1‑150 (MQ=255) aCCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg > 1:5364216/1‑150 (MQ=255) aCCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg > 1:3078171/1‑150 (MQ=255) aCCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg > 1:196879/1‑150 (MQ=255) ccTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGc < 2:2436188/150‑1 (MQ=255) ccTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGc < 1:268015/150‑1 (MQ=255) ttCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCg > 1:1534454/1‑150 (MQ=255) cGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGAt < 2:1495985/150‑1 (MQ=255) gagaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATc > 2:1043382/1‑150 (MQ=255) agaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCa > 2:2237636/1‑150 (MQ=255) agaAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCa > 2:4892741/1‑150 (MQ=255) aaGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAAt < 2:1619496/150‑1 (MQ=255) cTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAc < 2:4837271/150‑1 (MQ=255) cTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAc > 1:1333172/1‑150 (MQ=255) cTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAc < 1:3976536/150‑1 (MQ=255) tGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAAcc < 2:4379591/150‑1 (MQ=255) ccTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACt > 2:5335356/1‑150 (MQ=255) cTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTCTCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTc > 2:3693010/1‑150 (MQ=255) ttGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGc < 2:2540507/133‑1 (MQ=255) ttGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGc > 1:2540507/1‑133 (MQ=255) ggCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTg < 1:1363622/150‑1 (MQ=255) ccGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTAc > 1:151483/1‑150 (MQ=255) ccGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTAc < 1:3769393/150‑1 (MQ=255) tACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACACAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCaa < 2:3799788/150‑1 (MQ=255) aCCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAg > 1:5244232/1‑150 (MQ=255) aCCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAg < 2:5515593/150‑1 (MQ=255) gTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTg > 1:2387781/1‑150 (MQ=255) gTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTg > 1:4649151/1‑150 (MQ=255) ttGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGa > 1:647997/1‑150 (MQ=255) ttGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGa > 1:1832660/1‑150 (MQ=255) gagaTCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGAcc < 2:1376091/150‑1 (MQ=255) aTCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGAt < 1:1126583/150‑1 (MQ=255) ctcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATgg > 1:4568543/1‑150 (MQ=255) ctcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATgg > 2:362579/1‑150 (MQ=255) ctcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATgg < 2:1791523/150‑1 (MQ=255) tcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGc < 2:4153877/150‑1 (MQ=255) tcGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGc > 2:3572086/1‑150 (MQ=255) gACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCact > 1:1883591/1‑150 (MQ=255) acacTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCacta < 1:1169953/150‑1 (MQ=255) tATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTgt > 2:1288912/1‑150 (MQ=255) aTCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTgtc < 2:538187/150‑1 (MQ=255) aGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTgtcgtc < 2:5244232/150‑1 (MQ=39) tGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTcgtcgt < 1:5550058/150‑1 (MQ=38) tGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAACACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTcgtcgt < 1:824882/150‑1 (MQ=38) gtggCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGcc < 2:5200104/150‑1 (MQ=37) gtggCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGcc > 1:953462/1‑150 (MQ=37) ggCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCaa > 1:3857584/1‑150 (MQ=37) ccAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACa > 2:441873/1‑150 (MQ=37) ccAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACa > 1:2783141/1‑150 (MQ=37) cAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAg > 2:2002693/1‑150 (MQ=37) aaaCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGTCCAACAAAGACGGTCTGCCGATCAATATCGACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGc < 2:816980/150‑1 (MQ=255) aaaCTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGc > 2:4194912/1‑150 (MQ=37) gactgCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGcaccac < 2:2457937/150‑1 (MQ=34) tgCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCgg > 2:754345/1‑150 (MQ=37) tcaccgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGtt > 1:1100527/7‑150 (MQ=255) ccACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGtt > 1:2636589/1‑150 (MQ=35) ccACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGtt > 2:1130868/1‑150 (MQ=35) cACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTc < 2:3857584/150‑1 (MQ=35) cACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTc > 1:3472653/1‑150 (MQ=35) accgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCATCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCg > 2:4197359/5‑150 (MQ=11) accgccTTCGGTCACCGAAGG‑GGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCg > 2:679376/5‑150 (MQ=255) aCCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCg < 1:298881/150‑1 (MQ=34) cccTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGc > 2:910589/1‑150 (MQ=34) cccTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGc > 1:4503611/1‑150 (MQ=34) cccTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGACAGCCAACAGCACCACCGGTTCGGc > 1:5581313/1‑150 (MQ=21) cccTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGAACAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGc > 1:4814051/1‑150 (MQ=21) tCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACACAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACt < 2:2851200/150‑1 (MQ=21) ggTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGt > 1:4024217/1‑150 (MQ=34) gTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCCACTAAGACGGTCTGCCGTTCATTTAGCACTCGGAGCTGTACTTGTAGCTGACCGATGGCACTAGTGTCGTCGTGGCAGCCTAGAGCACCACCGGTTCGGCCTCTGTa < 2:3407592/150‑1 (MQ=11) gTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAACGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTa < 2:4331351/150‑1 (MQ=21) gTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTa > 1:4595537/1‑150 (MQ=34) gTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTa > 1:1484571/1‑150 (MQ=34) gTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTa < 2:595963/150‑1 (MQ=34) | CTTGATGCAGGCTCCATCACGCTCAGTGTTACCGACGCTACAGTTCCGGGTGCCACCTTCGAGAAGCTGGCCTTGGGTGGCCCGGCTACCGTTGAGATCTCGGACACTATCAGTGAAGTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGTAG > NC_002947/198218‑198515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |