| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,292 | A→G | 7.7% | intergenic (+47/‑234) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,292 | 0 | A | G | 7.7% | 300.2 / 10.1 | 108 | intergenic (+47/‑234) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base A (24/68); new base G (5/3); total (37/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGA > NC_002947/2246144‑2246441 | gACCTGTCGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 2:1826441/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 2:3038867/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 1:4764426/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 2:1176229/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 1:4185411/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 1:1075994/150‑1 (MQ=255)gACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGACTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCaa < 1:1342651/150‑1 (MQ=255) aCCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAAt < 2:3811920/150‑1 (MQ=255) ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATg < 2:2594911/150‑1 (MQ=255) ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATg < 1:3464358/150‑1 (MQ=255) ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATg < 1:1981386/150‑1 (MQ=255) cgcTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAAtt < 2:1661394/150‑1 (MQ=255) gcTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTc < 2:485931/150‑1 (MQ=255) gcTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTc < 2:485986/150‑1 (MQ=255) gcTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATCGTAAATTc < 2:3993579/150‑1 (MQ=255) cTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCa < 2:4205827/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCTCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCat < 2:5625968/150‑2 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGACTGCAATGGTAAATTaaa > 2:1745037/1‑150 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCaa < 2:2333646/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCaa < 1:1041525/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCaa < 1:1150089/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCaa < 1:2429548/150‑1 (MQ=255) ccGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGTGCCCGCGAATGCCATGGTAAATTCAata > 2:5387059/1‑150 (MQ=255) cGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTaaa < 1:456568/142‑1 (MQ=255) cGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTaaa > 2:456568/1‑142 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATc < 2:1169357/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATc < 1:4825306/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATc < 1:1000957/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATc < 1:3449759/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATc < 1:2559278/150‑1 (MQ=255) cTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGc < 1:4284171/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTc < 2:470083/150‑1 (MQ=255) aGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGcc < 1:365443/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCGAATGCGATATTGAATTTACCATTGCATTCGcgg < 1:244618/150‑3 (MQ=25) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCg < 1:1350592/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCgg < 1:45036/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCGAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGc < 1:3098949/150‑1 (MQ=25) tCGAAGAAAGAAAAAAAATAGTGGTAAACGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAAGATCGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACt < 2:607704/150‑1 (MQ=38) ataaataaaACAAAGAGTGGGAAATGCTGTTGGATTCCATCGCCTTATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCTATTGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGc < 1:1810735/148‑1 (MQ=255) gaaagaaaACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCCAAGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACAAAGcc > 2:5057223/1‑150 (MQ=255) aaagaaaACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGccc < 1:3706614/150‑1 (MQ=255) aaaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGCATGCCATGGTAAAATGAAAATCGCAGTCGCCGGCCCGCCCGCGCCCCCAGGCCACCACAGCCCCcaa > 2:5277738/1‑150 (MQ=255) aaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGGGCCCGCCCATGCCAAGGGGAAATCAATATCGCCATCGCCCGCCCCCCCGCGCCCACACGGCCACTCAGCCCCcaaa > 2:3501068/1‑150 (MQ=255) aaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAAATGAATATAGCATTCGCCCGCACGCCCCCGCCCCCACGCCAACAAAGCCCCcaaa > 2:3501096/1‑150 (MQ=255) aaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCCAAAGGCATGGTAAAATAAATAACGCAATCGCCCGCACCCCCCCGCCCCCACGCCCACAAACACCCaaaaa > 1:1693182/1‑150 (MQ=255) aaaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGTGCCCGCGAATGCGATGGTGAATTGAATATAGCCTTGGCCGGCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAAcc > 1:5157902/1‑150 (MQ=255) aaaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCCAAAGCAAATGTAAATTAAAAAAAACAAAAGCCCGCAAGCCCCCAACCCCAGGCCAACAAAACCCCCAAAAAca > 2:2847724/1‑149 (MQ=255) atgtgTGGTAAATGCTGTTGGCTTCCTTCGCGTGATTCATCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGATTGCATTGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCg < 2:1138644/146‑1 (MQ=255) agagTGGGAAATGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCTAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCgg < 1:1746915/150‑1 (MQ=255) gtgtgtGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCggg < 2:4960386/148‑1 (MQ=255) gagTGGGAAATGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGATTGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCggg < 2:2129782/150‑1 (MQ=255) gAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCCAATTCCATGGTAAAATCAAAATCGCAATCGCCGGCCCCCCCGCGCCCACAGGCCAACAAAGCCCCCCAAAAACGGGGGAggg > 2:5391912/1‑150 (MQ=255) cTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTaa < 1:5595247/150‑1 (MQ=255) gTTGGATTCAATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGt < 1:5085151/150‑1 (MQ=255) tGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 2:1987269/150‑1 (MQ=255) gCTTCCATCGCCTGTTTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGATTGCAATGGTAAATTAAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 1:1775098/150‑1 (MQ=255) gCTTCCATCGCCTGTTTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:625385/150‑1 (MQ=255) gCTTCCACCGCCTGATTCAGCTTTGCACCTAACCAGTGGGCGCGGGGGTGCCCGCTACTGAAATGGAAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 1:2635212/150‑1 (MQ=255) ctgccATCGCCTGATTCAGCTTTCCACCTAACCTGTGGGCGCGGGCGTCCCCGCGAATGAATTGTTAAATCCAATACCCCATCCGCCGCCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTg < 1:621882/147‑1 (MQ=255) tcccATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCACTCGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGt < 1:922733/148‑1 (MQ=255) tCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATCTCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTCAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCt < 2:1702158/150‑1 (MQ=255) cgactcaTTAAGCTTTCCACATAACCAGTGGTAGCGGGCGTGCCCGCTAATCAAATGCAAAATAAAATAACCCATTCCCCGCCACCCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCtg < 1:4292025/144‑1 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCCAATGCAAAGGTAAATAAAATATCGCATTAGCCCGCACGCCCCCGCCCACAGGCCAACAAAGCCCCAAAAAAACGGGGTAGGGCGGTAAGTGATTGTTATCtgtg > 2:832179/1‑150 (MQ=255) cTGATTCAGCTTTGCACCTAACCAGTGGGAGGGGGCGTGCCCGCTAATGCAATGGTAAATTCAATATCGCATACGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑a < 1:5387059/150‑1 (MQ=255) gCTTTGCACATACCCCGGGGGCGCGGGCGTGCCCGCTAATGCAATGTAAAATCCAATACCGCCTGCGCCGCCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAttt < 1:2001430/150‑1 (MQ=255) cTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCAGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtttt < 1:652940/150‑1 (MQ=255) tGCACCTACCCCGTGGGCGCGGGCGTGCCCGCGAATGCAATGTTAAATTCAATACCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGa < 1:2727007/150‑1 (MQ=255) cACCTAACCAGTGGGAGCGGGCGTGCCCCCCCAAGCCATGGTGAATTCAAAATCGCAGTCGCCGGCCCGCCCGCACCCCCAGGCCAAAAAAGCCCCAAAAAACCCGGGGGGGGGGGGAAGGGGTTGTTATATGTG‑GAAAAAtttttttaa > 2:2727007/1‑146 (MQ=255) aCCTAACCAGTGGGAGCGGGGGTGGCCCCGGATGCAAAGGTTAATTCCATATAGCCATGGCCCGCACGCCCGCGCCCACAGGGCAACAAAGCCCCCAAAAAACGGGGTACGGCGGTAAGTGGTTGTTCTGTGTT‑AAAAAAATTTTgtaga > 2:3125187/1‑146 (MQ=255) cTAACCAGTGGGAGCGGGCGTGCCCCCCCAAGCAAAGGTAAAATAAAAAAACCAATAGCCGGCCCCCCCCCGCCCAAACGCCCACAAACCCCCAAAAAACCCGGGGAGGGCGGGGAGTGCTTGTTATATGTGTAAAAAATTTTTTAaaat > 2:5232619/1‑150 (MQ=255) tAACCCGTGGGCGCGGGCGGCCCCGCGAATCCATTGTTAAATTAAATACCCCCTGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttt < 1:184635/150‑1 (MQ=255) aCCCGTGGGCGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATCCCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:242270/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGGGCCCGCTAATGCATTGGTAAATTCAATATCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:527342/150‑1 (MQ=255) ccAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTg < 2:836223/150‑1 (MQ=255) aGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGaa < 2:3901270/150‑1 (MQ=255) gAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTa < 2:4155998/150‑1 (MQ=255) ggggggGTGCCCGCTAATGAAATGGTAAATACAATAGCCCATGCGCCGCCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:5211092/148‑1 (MQ=255) ggggggGTGCCCGCGAATGCAATGTTAAATCCAATATCGCATGCGCCGCCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:5211148/148‑1 (MQ=255) cGGGCGTGCCCGCGACTGCAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:2055402/150‑1 (MQ=255) gggCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCAGTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt < 2:2928412/150‑1 (MQ=255) ggCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:2247977/1‑150 (MQ=255) gCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 1:221702/1‑150 (MQ=255) gCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 2:1828136/1‑150 (MQ=255) gCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGc > 2:3662865/1‑150 (MQ=255) gCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGc > 1:5177042/1‑150 (MQ=255) gCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGc > 1:5491573/1‑150 (MQ=255) cccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:3553621/1‑150 (MQ=255) cccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:4417379/1‑150 (MQ=255) cccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:4158267/1‑150 (MQ=255) cggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:1025293/3‑150 (MQ=25) cggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:4130524/3‑150 (MQ=25) cggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:4130208/3‑150 (MQ=25) cggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:202489/3‑150 (MQ=25) ccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCACACAGTCCAACTAAGCCACAAAAAAACGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGTATATTTTTGAAAATTAGTTTGACAGccc > 1:2146380/1‑150 (MQ=255) gCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATcc > 2:4321339/1‑150 (MQ=255) gCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACT‑AGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg > 2:1364987/1‑150 (MQ=255) cAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg > 2:2875966/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 2:1154366/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:4284064/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:3080205/1‑150 (MQ=255) | GACCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGA > NC_002947/2246144‑2246441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |