| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,278,859 | T→G | 5.9% | Q167P (CAG→CCG) | PP_2004 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,278,859 | 0 | T | G | 5.9% | 1110.1 / 39.7 | 323 | Q167P (CAG→CCG) | PP_2004 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (134/169); new base G (11/8); total (146/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 327 total aligned reads displayed.
GGCAATGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCG > NC_002947/2278710‑2279008 | ggCAATGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCt < 1:1121730/150‑1 (MQ=255)ggCAATGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCt < 1:3949697/150‑1 (MQ=255) gCAATGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTg < 2:553134/150‑1 (MQ=255) aaTGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCa > 1:1985917/1‑150 (MQ=255) cccGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCAcccc < 2:3055421/150‑3 (MQ=255) cccGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCgg < 1:3587634/150‑1 (MQ=255) ccGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCggg < 1:4633081/150‑1 (MQ=255) tGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCgg < 1:4183357/150‑1 (MQ=255) tGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCgg < 2:3088512/150‑1 (MQ=255) ggCCAGTTGCACGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCGGCACCCGGGTGCAGGc < 2:789576/150‑1 (MQ=255) ggCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGc < 1:4109593/150‑1 (MQ=255) gCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGcc < 2:1621197/150‑1 (MQ=255) ccAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCa > 1:1385336/1‑150 (MQ=255) cAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCGGCACCCCGGTGCAGGccga < 2:932454/150‑3 (MQ=255) gTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCGGCACCCCGGTGCAGGccgaac < 1:2451044/150‑5 (MQ=255) tGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAACGCGGTTGATCGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCg < 2:5518873/150‑1 (MQ=255) tGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCg < 2:2962675/150‑1 (MQ=255) aaGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGcc > 2:4544665/1‑150 (MQ=255) aGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCa > 1:3747298/1‑150 (MQ=255) gcgcGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTgg < 1:4474659/150‑1 (MQ=255) gcgcGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTgg < 2:2349520/150‑1 (MQ=255) gcgGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGgc > 2:859527/1‑150 (MQ=255) tCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGgccagcc > 2:741122/1‑150 (MQ=255) cGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCg < 2:3657852/150‑1 (MQ=255) gCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCgg > 1:3205053/1‑150 (MQ=255) cAGCTGATTGCCGTCGGCGGCGAACTGCACCGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGc < 2:253393/150‑1 (MQ=255) aGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGcc > 2:2763157/1‑150 (MQ=255) aGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTGCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGcc > 1:710629/1‑150 (MQ=255) gCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCca < 2:905715/150‑1 (MQ=255) tGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCcagc > 1:3158603/1‑150 (MQ=255) ttGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTggg < 1:825513/130‑1 (MQ=255) gTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTc > 2:2444833/1‑150 (MQ=255) gTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTc < 2:5268146/150‑1 (MQ=255) ggcggcGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGAc < 1:3254789/150‑1 (MQ=255) gcggcgAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGAcc > 2:4100907/1‑150 (MQ=255) gcggcgAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGAcc < 1:2631083/150‑1 (MQ=255) ggcgAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACcac < 2:5165344/150‑1 (MQ=255) cgAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACaa > 1:1645258/1‑150 (MQ=255) gAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACaaa < 2:1193772/150‑1 (MQ=255) cTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCg > 1:2811099/1‑150 (MQ=255) gCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGt > 1:4847385/1‑150 (MQ=255) cacaGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGtt < 1:3600913/150‑1 (MQ=255) cacaGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGtt > 1:1293232/1‑150 (MQ=255) cacaGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGtt > 2:5050344/1‑150 (MQ=255) acaGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTg < 2:4625715/150‑1 (MQ=255) aGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTa > 1:4706341/1‑150 (MQ=255) gctgcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGtt < 2:1882802/150‑1 (MQ=255) tgcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCcag < 2:1715834/115‑1 (MQ=255) tgcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGt > 1:4590092/1‑150 (MQ=255) gcAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTa < 2:4475843/150‑1 (MQ=255) cAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCa < 2:5296247/82‑1 (MQ=255) cAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGATGTAg > 1:3699125/1‑150 (MQ=255) aaaGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAgg > 2:718559/1‑150 (MQ=255) aaaGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAgg > 2:1507347/1‑150 (MQ=255) gCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGc > 2:2318931/1‑150 (MQ=255) gTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGa > 1:2675960/1‑150 (MQ=255) ttGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGAt > 1:5356603/1‑150 (MQ=255) tGATAGCGCGCGGTATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATg < 2:1791813/150‑1 (MQ=255) tGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATg < 1:1866409/150‑1 (MQ=255) tGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATg < 1:5050344/150‑1 (MQ=255) aTAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGTCCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGa > 1:5232127/1‑150 (MQ=255) tAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGaa < 1:5344642/150‑1 (MQ=255) tAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGaa < 2:717845/150‑1 (MQ=255) tAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGCTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGaa < 2:1480270/150‑1 (MQ=255) aGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAAt < 1:2051899/150‑1 (MQ=255) aGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAAt > 1:5080258/1‑150 (MQ=255) gcgcgcGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATa < 2:5148983/150‑1 (MQ=255) gcgcgcGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATa < 2:124899/150‑1 (MQ=255) gcgcgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCTGCCAGCTCGGCCAACTGGGCCAGCCAGCCGACCAGCAGTGAGTCGACCACAAAGCGGATGTAGTCGTTGTAGGGGCTGATGGAATAGa > 2:5419865/1‑150 (MQ=255) gcgcgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGa < 2:4822119/150‑1 (MQ=255) gcgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAg > 1:3887118/1‑150 (MQ=255) cgGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAgc < 1:2026370/150‑1 (MQ=255) ggaggGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCa < 2:3279512/150‑1 (MQ=255) cgcgGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAgg < 2:3891466/119‑1 (MQ=255) gcgGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGccc > 1:4385145/1‑150 (MQ=255) cgGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCt < 2:1985917/150‑1 (MQ=255) ggCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTg > 2:2605256/1‑150 (MQ=255) aaaCTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGc < 2:3709649/150‑1 (MQ=255) aaCTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCa > 1:5176056/1‑150 (MQ=255) cTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATc > 1:793787/1‑150 (MQ=255) tCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATgg < 1:146437/118‑1 (MQ=255) tCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTg < 2:3641149/143‑1 (MQ=255) tCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCt > 2:2154452/1‑150 (MQ=255) aTCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCCGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTcc > 1:910481/1‑150 (MQ=255) tctcCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCt < 1:2984425/150‑1 (MQ=255) tcCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCa > 1:4767319/1‑150 (MQ=255) ccAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCaa > 2:3179179/1‑150 (MQ=255) ccAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCACGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCaa < 2:5598933/150‑1 (MQ=255) cAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCaaa < 1:3108745/150‑1 (MQ=255) cAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCaaa < 2:1088109/150‑1 (MQ=255) ggCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGc > 1:2184381/1‑150 (MQ=255) ccgagctggCCGGCACCCCGGTGCAGGCCGGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGc > 1:3391819/8‑150 (MQ=255) gCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCg < 2:1385336/150‑1 (MQ=255) cgagctggCCGGCACCCCGGTGCAGGCCGGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCg > 2:4589155/7‑150 (MQ=255) gagctggCCGGCACCCCGGTGCAGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCgg > 1:1745084/6‑150 (MQ=255) ctggCCGGCACCCCGGTGCAGGCCGGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGaa > 1:2535308/3‑150 (MQ=255) cGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAAt < 1:2318931/150‑1 (MQ=255) cGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAAt < 2:61342/150‑1 (MQ=255) gCCGGCACCCCGGTGCAGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATgg > 1:1249796/1‑150 (MQ=255) tGCACCGGTGTGCCGGCCAGCTCGGCAAACTGGGCAAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGCAGCCCTGGGCATCTTCCTCAAAGCGGGAATTGCcg > 2:3509350/1‑150 (MQ=255) | GGCAATGCCCGGGGTTGGCCAGTTGCAAGGTAGCGCGGCTCAGACGCAGCTGATTGCCGTCGGCGGCGAACTGCACAGGCGTGCTGCAAAGCGGTTGATAGCGCGCGGCATAGGAGGGCGCGGCAAACTCGATCTCCAGGCGTTCGGCCTGCACCGGGGTGCCGGCCAGCTCGGCCAACTGGGCCAGCCAGCCGGCCAGCAGTGAGTCGACCACAAAGCGGTTGTAGTCGTTGTAGGGGCTGATGGAATAGAAGCGCAGCCAGGCGCCCTGGGCATCTTCCTCAAAGCGGGAATGGCCG > NC_002947/2278710‑2279008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |