| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 237,452 | T→G | 5.9% | D111E (GAT→GAG) ‡ | algR → | alginate biosynthesis regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 237,452 | 0 | T | G | 5.9% | 1018.0 / 33.5 | 295 | D111E (GAT→GAG) ‡ | algR | alginate biosynthesis regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (156/121); new base G (12/6); total (168/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
GGCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAT > NC_002947/237303‑237601 | ggCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGAt > 1:3929388/1‑150 (MQ=255)ggCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGAt < 1:653811/150‑1 (MQ=255) ccTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGc > 1:2115163/1‑150 (MQ=255) tGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCCCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCt < 2:5032849/150‑1 (MQ=255) aGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgc < 2:3539792/150‑1 (MQ=255) gTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgcgc > 2:668542/1‑150 (MQ=255) ttGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCa > 2:3502828/1‑150 (MQ=255) tGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCaa < 2:3159438/150‑1 (MQ=255) ccGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAgg < 2:4016297/150‑1 (MQ=255) cGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGc < 1:5016312/150‑1 (MQ=255) gCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGcc < 1:4071712/150‑1 (MQ=255) tCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtg < 2:1489654/150‑4 (MQ=255) tCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtg < 1:763686/150‑4 (MQ=255) tCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtg < 2:1139592/150‑4 (MQ=255) cTGTGCGATCGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCGGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaaaa > 2:4770492/1‑150 (MQ=255) cTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaaaa > 1:322208/1‑150 (MQ=255) cTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaaaa > 2:771795/1‑150 (MQ=255) cGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa < 2:5179246/150‑1 (MQ=255) aaCGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc > 1:601191/1‑150 (MQ=255) gcgAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACcgcg > 2:2174/1‑150 (MQ=255) cgAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCgcgc > 2:5340136/1‑150 (MQ=255) gAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc > 2:2766926/1‑145 (MQ=255) cgccgcCCGCTGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCAAGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAAt < 2:4433121/150‑1 (MQ=255) gcccgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggc > 2:3762948/1‑150 (MQ=255) cccgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggcg < 2:833315/150‑1 (MQ=255) cgcgGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCACTTggcggc < 1:971494/150‑1 (MQ=255) gcgGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGgcggcg > 2:337654/1‑150 (MQ=255) gtgtTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTAcc > 2:1602503/1‑150 (MQ=255) ttttGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACccgg > 1:2663864/1‑150 (MQ=255) cTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCcggccggc < 2:2738175/150‑1 (MQ=255) cTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCcggccggc > 2:558144/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAATGACAGTACCCTCAGCCATGTGACCAAGCACTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 2:243779/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 2:4553168/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 1:2985026/1‑150 (MQ=255) ccGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCa > 2:345130/1‑150 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACCGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAACTGGCGGCGCTTACCCGGCCGGCCaa < 1:1457045/150‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCaa < 1:1191559/150‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCaa > 1:1374395/1‑150 (MQ=255) gggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATg > 2:4320621/1‑150 (MQ=255) ggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGa > 1:21698/1‑150 (MQ=255) gatgatGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGaa < 2:5431110/150‑1 (MQ=255) atgatgAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCATGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAg < 2:5596692/150‑1 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggc < 2:2651581/150‑1 (MQ=255) tgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcgg > 2:4703460/1‑150 (MQ=255) gaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggc > 2:2018520/1‑150 (MQ=255) aTACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggcgg > 1:4789256/1‑150 (MQ=255) tACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggcggc > 1:1223969/1‑150 (MQ=255) ctgTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGccc < 2:2911537/148‑1 (MQ=255) cGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGccc < 2:4904366/150‑1 (MQ=255) nagagGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCa > 1:4156811/2‑150 (MQ=255) cAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCa > 1:5454200/1‑150 (MQ=255) agagGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAg > 1:4230548/1‑150 (MQ=255) aTTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat < 2:2261060/150‑1 (MQ=255) ttCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGa > 1:2252215/1‑125 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa < 1:5138344/150‑1 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa < 2:3842550/150‑1 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa < 2:1518395/150‑1 (MQ=255) aaGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATagcagc > 2:3003278/1‑150 (MQ=255) aGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAgcg > 2:189227/1‑150 (MQ=255) aCAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGccc < 1:417543/150‑1 (MQ=255) aCAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGccc > 2:306816/1‑150 (MQ=255) cAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACccggcc < 2:2116796/108‑1 (MQ=255) gTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCa < 2:4841372/150‑1 (MQ=255) tACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAc < 2:2561131/150‑1 (MQ=255) tACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAc > 2:2275256/1‑150 (MQ=255) cTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACgcgc > 1:1544490/1‑150 (MQ=255) aGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCaaa < 1:5246194/150‑1 (MQ=255) gCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAg > 2:664734/1‑150 (MQ=255) cATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGc < 1:558144/150‑1 (MQ=255) aTGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCa > 2:1767469/1‑150 (MQ=255) tgtgACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCAt > 1:2154568/1‑150 (MQ=255) tgtgACCAAGCCCTCCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCAt < 2:3679900/150‑1 (MQ=255) ccAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAAc < 1:5396201/150‑1 (MQ=255) ccAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAAc < 2:125442/150‑1 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 2:2814842/1‑150 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 1:4448335/1‑150 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 2:3959634/1‑150 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 1:1827268/1‑150 (MQ=255) aaGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTg > 2:1371230/1‑150 (MQ=255) aGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGcc < 1:428134/105‑1 (MQ=255) aGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGa < 1:2863280/150‑1 (MQ=255) cccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATc < 1:1084387/150‑1 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 2:525236/1‑150 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 1:3870472/1‑150 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 1:2365059/1‑150 (MQ=255) tCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGt > 1:529291/1‑150 (MQ=255) tCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGt > 1:3815658/1‑150 (MQ=255) ccACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCCGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCa > 1:366297/1‑150 (MQ=255) ccACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCa < 1:3271825/150‑1 (MQ=255) cACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAg < 1:2528357/150‑1 (MQ=255) ccTTGCGCAAGGCATCGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGa > 1:2631028/1‑150 (MQ=255) cTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt < 1:1602503/150‑1 (MQ=255) cTTGCGCAAGGCATCGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt > 1:1954801/1‑150 (MQ=255) cTTGCGCAAGGCATCGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt > 1:4427676/1‑150 (MQ=255) ttGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCCTTACCCCAGGTGATc > 1:462778/1‑150 (MQ=255) tGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCt < 2:4164287/150‑1 (MQ=255) cgcgATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTAt < 2:4214142/150‑1 (MQ=255) cgATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTAttt > 1:3390657/1‑150 (MQ=255) gATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTc < 1:4320621/150‑1 (MQ=255) tGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAt < 2:4492654/150‑1 (MQ=255) | GGCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAT > NC_002947/237303‑237601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |