| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 237,457 | T→C | 5.7% | L113S (TTG→TCG) | algR → | alginate biosynthesis regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 237,457 | 0 | T | C | 5.7% | 974.3 / 28.6 | 302 | L113S (TTG→TCG) | algR | alginate biosynthesis regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (156/127); new base C (11/6); total (169/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
AGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTGCCG > NC_002947/237310‑237606 | aGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgc < 2:3539793/150‑1 (MQ=255) gTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgcgc > 2:668542/1‑150 (MQ=255) gTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTGGCGCGATGCCTTgcgc > 2:194679/1‑150 (MQ=255) gCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAg < 2:3737709/150‑1 (MQ=255) tCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtg < 1:763686/150‑4 (MQ=255) cTGTGCGATCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCGGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaaaa > 2:4770492/1‑150 (MQ=255) cTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaaaa > 2:771795/1‑150 (MQ=255) cGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa > 2:3307836/1‑150 (MQ=255) cGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa < 2:5179246/150‑1 (MQ=255) aaCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc > 1:1861443/1‑150 (MQ=255) accgcgggcggcGCCTCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc > 1:2651581/7‑150 (MQ=255) aCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACcg > 1:5131058/1‑150 (MQ=255) gcgAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACcgcg > 2:2814985/1‑150 (MQ=255) cgAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCgcgc > 2:5340136/1‑150 (MQ=255) gAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc < 1:2766926/145‑1 (MQ=255) gcc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggc > 2:187651/1‑150 (MQ=255) cc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggcg < 2:833315/150‑1 (MQ=255) cc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggcg < 1:2498340/150‑1 (MQ=255) cgcgGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCACTTggcggc < 1:971494/150‑1 (MQ=255) cgGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGgcgc < 1:32277/150‑1 (MQ=255) tggtgTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTa > 1:3429665/1‑150 (MQ=255) gtgtTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTAcc > 2:1602503/1‑150 (MQ=255) cTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCcggccggc > 2:558144/1‑150 (MQ=255) cTCCGGGGATGAGGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCcggccggc < 2:2738547/150‑1 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTCCCCggccggcc > 2:3471064/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 1:2985026/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 2:4173652/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 2:4553168/1‑150 (MQ=255) tCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc > 2:1321580/1‑150 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACCGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAACTGGCGGCGCTTACCCGGCCGGCCaa < 1:1457045/150‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCaa < 1:1191559/150‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCaa > 1:1374395/1‑150 (MQ=255) ggggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAAt < 2:3419827/150‑1 (MQ=255) ggggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAAt > 1:2566491/1‑150 (MQ=255) gatgatGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGaa < 2:5431110/150‑1 (MQ=255) atgatgAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCATGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAg < 2:5596692/150‑1 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTCCCCGGCCGGCCAATGAAggc > 2:4894072/1‑150 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggc < 2:2651581/150‑1 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggc < 2:2115163/150‑1 (MQ=255) tgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcgg > 2:4703460/1‑150 (MQ=255) gaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAACGCGCCCAAATCGCGGCGCTTACCCGGCCGGCCAATGAAggcggc > 2:3516830/1‑150 (MQ=255) aTACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggcgg < 1:2004400/150‑1 (MQ=255) tACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggcggc > 1:1223969/1‑150 (MQ=255) cGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGccc < 2:2911578/150‑1 (MQ=255) gCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGc < 1:622009/150‑1 (MQ=255) gCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGc < 2:1199835/150‑1 (MQ=255) agagGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAg > 1:4230548/1‑150 (MQ=255) aTTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat > 1:216347/1‑150 (MQ=255) aTTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat < 2:2261078/150‑1 (MQ=255) ttCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGa < 2:2252215/125‑1 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa > 1:4995892/1‑150 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa > 2:4076146/1‑150 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa < 2:1518395/150‑1 (MQ=255) aaGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATagcagc > 2:3003278/1‑150 (MQ=255) aCAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGccc < 1:417543/150‑1 (MQ=255) cAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACccggcc > 1:2116931/1‑108 (MQ=255) cccTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAcgc < 1:5460849/150‑1 (MQ=255) ccTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAcgcg > 2:2767323/1‑150 (MQ=255) cTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACgcgc > 1:1544490/1‑150 (MQ=255) cAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCaa < 2:3774392/150‑1 (MQ=255) aGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCaaa < 1:5246194/150‑1 (MQ=255) gCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAg > 2:664734/1‑150 (MQ=255) cATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGc < 1:558458/150‑1 (MQ=255) cATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGc < 2:216347/150‑1 (MQ=255) aTGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCa > 2:1767469/1‑150 (MQ=255) ccAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAAc < 1:5396201/150‑1 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 2:3959634/1‑150 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACt > 1:4448335/1‑150 (MQ=255) aGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGcc > 2:428144/1‑105 (MQ=255) aGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGcc < 1:428134/105‑1 (MQ=255) cccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATc < 1:1084387/150‑1 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 1:2365059/1‑150 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 2:525236/1‑150 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 2:2318577/1‑150 (MQ=255) ccTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATcc > 1:3870472/1‑150 (MQ=255) cTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATccc > 1:2200175/1‑150 (MQ=255) tCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGt > 1:529291/1‑150 (MQ=255) tCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGt > 1:3815658/1‑150 (MQ=255) gCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTAccc > 1:475883/1‑150 (MQ=255) ccACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCCGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCa > 1:366297/1‑150 (MQ=255) ccACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCa < 1:3271841/150‑1 (MQ=255) ccACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCa > 1:4067015/1‑150 (MQ=255) cACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAg > 2:5020073/1‑150 (MQ=255) cTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt < 1:1602503/150‑1 (MQ=255) cTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt < 1:4132000/150‑1 (MQ=255) cTTGCGCAAGGCATCGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGAt > 1:4427676/1‑150 (MQ=255) ttGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATc > 2:248294/1‑150 (MQ=255) ttGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCCTTACCCCAGGTGATc > 1:462778/1‑150 (MQ=255) tGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCt < 2:3092537/150‑1 (MQ=255) gcgcGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTa < 2:1395292/150‑1 (MQ=255) gcgATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCACAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTAtt > 2:4382046/1‑150 (MQ=255) gATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTc < 1:4320621/150‑1 (MQ=255) tGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAt < 2:4492654/150‑1 (MQ=255) gCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCTCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAtt < 2:3051305/150‑1 (MQ=255) gCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAtt < 1:5402853/150‑1 (MQ=255) gCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCAtt < 2:3880409/150‑1 (MQ=255) ccTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTg > 1:1683477/1‑150 (MQ=255) ccTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTg > 2:3975353/1‑150 (MQ=255) ttGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTGcc > 2:2564147/1‑150 (MQ=255) tGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTGCCg < 1:487158/150‑1 (MQ=255) | AGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTCATTGCCG > NC_002947/237310‑237606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |