| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,863 | C→T | 5.4% | intergenic (+122/‑59) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,863 | 0 | C | T | 5.4% | 465.2 / 10.8 | 147 | intergenic (+122/‑59) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (65/74); new base T (6/2); total (71/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.31e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCA > NC_002947/2461715‑2462012 | gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:2541029/150‑1 (MQ=255)gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:5292894/150‑1 (MQ=255) gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAATCCCGCGCCAAACGGAGTTTAGCTGCCCCt > 1:3300238/1‑150 (MQ=255) aaCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTg > 2:2596275/1‑150 (MQ=255) aaCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTg < 2:2244596/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 2:3893038/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:4040770/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:2422886/150‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTTACCCGCTCCGACAGGCTTATCGCGGCCCCGGTAg > 1:2665551/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCCCGCCAAAAGGATTAAAGCAGCCCCCGttg > 1:1106499/1‑148 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGGTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAg < 2:3649999/150‑1 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAATCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCACCAACAGGATTTACTCTGCCCCGGGAgg > 1:4045351/1‑150 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAgg < 2:319072/150‑1 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCATGTAgg < 2:2030604/150‑1 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCATGTAgg < 2:4863147/150‑1 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGGAAACCGCGCCGACCGGGTTTTAGCTGGCCCGGTgggg > 1:5349769/1‑149 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAg < 2:5508991/150‑1 (MQ=255) cAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc < 2:998872/150‑1 (MQ=255) aGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCg < 1:1378693/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:3491126/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:2117661/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:861141/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ATTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:3691383/150‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg < 2:24619/150‑1 (MQ=25) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 2:356753/150‑1 (MQ=255) tttCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGtt < 2:2338842/150‑1 (MQ=255) ttCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGttt < 1:4186202/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTTTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:2951155/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAc < 1:4802568/150‑1 (MQ=25) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:1901535/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCACCAGGATTATAGCTGCCCCTGTAGGAGCCGGTTTaac > 2:674605/1‑148 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCTGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc < 1:1647660/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc < 1:203963/150‑1 (MQ=255) tGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCACCTACAGGGTTATAGCTTCCCCAGTAGGAGCGGGTTTTCACGCGa > 1:316868/1‑150 (MQ=38) tGATCCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCT‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGa < 2:3593695/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCACCAACAGGATTATAGCTTCCCCGGGTGGCGCGGGGTTAACCGCGAAGAGGc > 2:1192532/1‑150 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACACGATTATAGCAGCCCCTGTAGGAGCCGGTTTACCCGCGAAGAGGc > 2:3648873/1‑150 (MQ=255) aaTGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGCAGAGGCCAGCACCGGcc > 2:5368450/1‑149 (MQ=255) aaTGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCa > 2:1591769/1‑150 (MQ=255) aaaaaCGGGAACCTCCGGGTGCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGGGCCGGCCCTTGCGCGGGTACACCCGCTCCAACAGTATTATCGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga < 2:4849921/150‑1 (MQ=38) aaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga > 1:4653330/1‑150 (MQ=255) aaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCCCACCAACAGGGTTATAGCTGCCCCTGGAGGATCGGGTTTTGCCGCGAAGAGGCCCGCACCGGCAACCCAGaa > 1:177921/1‑150 (MQ=255) aaCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACACGATTATAGCTGCCCCAGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCCGCAACCGAGaa > 2:2078605/1‑150 (MQ=38) aCGGGACCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTACCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaaa < 2:906583/150‑1 (MQ=255) ggAACCTGGGGGTTCCCG‑TTTTTTTTTTTTTTGAATGTGTGTTGTCAGTGCGGGCCGTTTCGCGGGTAAACCCGCTCCTACAGGTTTATCGGGGCCCCTGTAGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc < 2:3394388/150‑1 (MQ=37) gcacccTTCGGGTCCCCG‑TTTTTTTTTATTCTTAATGTTTGTTGTCAGTGCCGGCCCTTGCGCGGTAAACCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAGCACCGGCAACCGAGAAAccc < 2:3813254/146‑1 (MQ=38) cG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTACTACAGGATTATCCCTTCCCCAGTAGGATCGGGGTTAACCCCGAAGAGGCCAGCAACGGCCACCCAGAAACCCGAAAGTGAGCACAGcc > 2:1971391/1‑150 (MQ=255) cG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTACAAAAGGATTATAGCTTCCCCCGTATGTGCGGGTTTTACCCCGAAGAGGCCCGCACCCGCCACCCAGAAAACCAACAGTGCGCACAccc > 1:4945567/1‑150 (MQ=255) tttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTAAAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCGGCAACCCAGCAACCCTACGGTGCGCACAGccca > 2:1138672/1‑149 (MQ=38) tttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCGACAGGCTTATAGCGGCCCCGGTAGGGGCGGGTTTACCCGCGCAGAGGCCCGCACCGGCCACCGCCAAACCCGACTGTGCGCACAGccca > 1:4084445/1‑149 (MQ=255) tttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCGACAACAGGATTATAGCTGCCCCGGGAGGAGCGGGTTTACCCGCGCAGTGGCCAGCACCCGCAACCGCGAAACCCAACAGTGCGCACAGcccg > 1:1834094/1‑149 (MQ=255) ttttttttttTCTGATTGTGTGTTGTCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTTTTATCGCTGCCCCTGTAGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 2:812126/150‑1 (MQ=38) ttttttCTGAATGTGTGTTGTCAGTGCGGGCCCTTTCGCGGTTAAACCCGCTCCTACTTTATTATCGCTGCCCCTGTTGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGtt < 1:373687/150‑1 (MQ=255) tttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGtt < 2:3638775/150‑1 (MQ=255) tttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGtt < 2:3194351/150‑1 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCCGCAACCCAGAAACCCGACGGTGCGCACAGCCCGACTGTTCAtt > 2:192762/1‑150 (MQ=38) tCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAACCCCCTCCTACAGGATTATAGCAGCCCCTGTAGGAGCGGGTTTAACCCCGCAGAGGCCCCCACCGGCCACCGAGCAACCCAACAGTGCGCACAGCCCAACTGTTCaata > 1:5492706/1‑147 (MQ=255) gAAGGTGTGTTNTCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc < 2:891253/150‑1 (MQ=255) tttgtgtgtgGTCGGGGCGGGCCCTTGGGGGGGTAACCCCGCTCCGCCTGTATTTGCGCGGCCCCTGTTGGCGGGGTTTTCCCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgct < 1:4252130/148‑1 (MQ=255) attgtgtgTTGTCAGTGCCGGCCCTTGCGGGGTTAAACCCGCTCCTACTGTTTTACCGCTGCCCCTTTCGGAGGGGTTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgct < 1:1991997/148‑1 (MQ=255) aaTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgct < 2:1702119/150‑1 (MQ=255) aaTGTGTGTTGTCAGTGCCGGCCCTTGCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgct < 2:5074294/150‑1 (MQ=255) tgtgtTGTCAGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 2:2102310/150‑1 (MQ=255) gttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTATTTTCGCTGCCCCTGTAGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTc < 1:4101206/150‑1 (MQ=39) ccTTTCGCGGGTAAACCCGCTCCTACAGGTTTATCGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 1:5612875/150‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:3188035/150‑1 (MQ=255) cTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTTGGAGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAg < 1:5592459/150‑1 (MQ=255) gggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAc > 1:301971/1‑150 (MQ=255) ggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGACGAGGCCAGCACCGGCAACCGAGAAACCCTCCTGTGCGCACAGCCCTACTGTTCATACTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc > 2:2884446/1‑150 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTCCTGTTCCTTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCgggc > 2:4570957/1‑149 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 1:5130351/1‑150 (MQ=255) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:586461/1‑150 (MQ=37) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACTGACAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 2:67852/1‑150 (MQ=18) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCGCCGGCAACCGAGAAACCCTACTGTGCGCACAGTCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:1004868/1‑150 (MQ=255) ccGCTCCTACAGGATTATCGATGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCGACGGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCGGGAgc > 1:3541046/1‑150 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 1:1365851/1‑150 (MQ=255) cTACATTATTATCGCTGCCCTTGTTGGCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:2596275/150‑1 (MQ=255) cTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:3648502/150‑1 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:2810255/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:1921053/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:284692/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:438510/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:443854/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:4903260/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAggg > 1:3057040/1‑150 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt < 2:2984078/150‑1 (MQ=255) cAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:544210/1‑150 (MQ=255) cAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:5376125/1‑150 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg > 2:4290222/1‑150 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg > 2:1843898/1‑150 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg > 2:283857/1‑150 (MQ=255) ggATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtggg < 2:3057040/150‑2 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:4219324/1‑150 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgggg < 2:5181947/150‑3 (MQ=255) ctgcgcgcgGCCCCGGGCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAACCCCTACGGTGCGCACAGCCCGCCTGTTCCTTCTGCTGCTCCTCACCGCCTGCACCCAAGGCCCCACCCTGGAGCGCCGGGGTGGTcc < 2:4025995/145‑1 (MQ=37) aTTACCGCTCCCCCTGTTGTTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTcc < 1:724492/150‑1 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:2152817/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCACCACCCAGGCGCTCCAGggtggggccttg < 2:2166743/150‑8 (MQ=38) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgca < 2:4653330/150‑1 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgca > 2:1027261/1‑150 (MQ=255) | GTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCA > NC_002947/2461715‑2462012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |