| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,479,135 | T→C | 20.7% | intergenic (‑48/+132) | PP_2167 ← / ← tal | PhoD‑like phosphatase/transaldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,479,135 | 0 | T | C | 20.7% | 256.0 / 58.2 | 132 | intergenic (‑48/+132) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| Reads supporting (aligned to +/- strand): ref base T (22/72); new base C (11/14); total (46/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.25e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAT > NC_002947/2478988‑2479284 | gcggggggggAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTa < 2:2546835/144‑1 (MQ=255)gCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGTAAGCCCGCCCTTa > 2:4576154/1‑150 (MQ=255)gCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTa < 2:2219963/150‑1 (MQ=255)gCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTa < 2:4890994/150‑1 (MQ=255)gCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTa < 2:4186352/150‑1 (MQ=255) cGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTAc > 1:4588403/1‑150 (MQ=255) tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACTTCGATCa > 2:5584986/1‑150 (MQ=255) tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:4289301/150‑1 (MQ=255) gaGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGGACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCa < 1:5049445/149‑1 (MQ=255) aGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCGGTTCGCGGGCACGCCCCCCCGTACATCGCTCAg > 1:3674710/1‑150 (MQ=255) gTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAgt < 1:3323619/150‑1 (MQ=255) gACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAgtgt < 1:156578/150‑1 (MQ=255) gACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAgtgt < 1:156252/150‑1 (MQ=255) cGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaa < 1:586304/150‑2 (MQ=38) cGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaa < 1:586261/150‑2 (MQ=38) aGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaagg < 2:4979933/150‑4 (MQ=38) gccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaaggg < 2:1410364/150‑5 (MQ=38) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaagggc < 2:3870108/150‑6 (MQ=38) ccagacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTaagggc < 1:3560332/150‑6 (MQ=38) agacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑Cgg < 2:2271374/150‑1 (MQ=255) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑Cggg < 2:4612866/150‑1 (MQ=37) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑Cggg < 2:3942559/150‑1 (MQ=37) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑Cggg < 1:337576/150‑1 (MQ=37) gacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑Cggg < 2:568665/150‑1 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCtt < 2:2817844/150‑1 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCtt < 1:987037/150‑1 (MQ=255) ggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCtt < 2:920532/150‑1 (MQ=255) gccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCGTACATCGATCAGTGTAGGAG‑CGGGCTTg > 1:3676777/1‑150 (MQ=255) ccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGTGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGc < 2:2149527/150‑1 (MQ=255) ccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑CGGGCTTGc > 2:2864880/1‑150 (MQ=37) cagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGcc < 2:2073956/150‑1 (MQ=255) agacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGccc < 2:1085204/150‑1 (MQ=255) agacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACATCGATCAGTGTAGGAG‑CGGGCTTGccc > 2:5029473/1‑150 (MQ=255) gCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGATAGCGGGCAACCCCGCCCGTACAAAGATCAGTGTAGGAGACGGGGTGGcccccc > 2:2529300/1‑147 (MQ=255) tGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTTTTAGCGGGGAAGCCCGCCCGTACAAAGATAAGTGTTTGAT‑CGGGGTTTGCCGCGaaa > 1:2799749/1‑149 (MQ=255) tGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTGGCGGGCAAGCCCGCCCTTAAATCGATCAGTGTTGGTG‑CGGGCGTTCCCGCGAAc > 1:2799708/1‑150 (MQ=255) ggggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCAAGCCcgctccta < 1:2734375/150‑6 (MQ=255) gggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCACCGGGTTAGGGGAGGTCCTCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACCTCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAg < 2:302741/150‑1 (MQ=255) ggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAACCCCCCCATAAAAAGATAACTTTAGGAG‑CCGGCTTTCCCGCCAACaag > 1:436505/1‑148 (MQ=255) gTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGc < 2:5115096/150‑1 (MQ=255) tCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCCGGCACGCCCCCCCATACAAAGATAAGGGTAGGAG‑CGGGCGTGCCCCCGAACACGccc > 1:5017206/1‑150 (MQ=255) tCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTAGCGGGCAAGACCCCCCATAAAAAGATCAGTGTAGGAG‑CGGGGTTTGCCGCCAACACGccc > 1:4054234/1‑150 (MQ=255) cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCga < 1:4135741/150‑1 (MQ=255) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑Cgg < 1:281413/127‑1 (MQ=25) aGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑Cgg > 2:281413/1‑127 (MQ=25) cggcgCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAAt < 1:5067515/150‑1 (MQ=255) cgcATTACCGGGCCGGCGTTAACGAGGGGCATCGGGTTAGGGGAGGTAATCTACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCATTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCa < 1:2311721/150‑1 (MQ=38) gcAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGCCATCGACAGCTCGGGTGGCTTTGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCaa < 1:2695247/150‑1 (MQ=255) gTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATac < 2:3104478/150‑1 (MQ=255) cGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCAGTTCGCGGGCAAGCCCGCCCTTACAAAGATCAGTGTAGGAG‑CGGGCTTGCCCGCGCACAGGCCCGAGAATTCAAAACACAACTAAg > 2:4483242/1‑150 (MQ=255) gagaACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGt < 2:3177670/150‑1 (MQ=255) gaACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg < 2:2783107/150‑1 (MQ=255) aaCGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑CGGGCtt < 2:411037/105‑1 (MQ=18) aaCGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGG‑CGGGCtt > 1:411037/1‑105 (MQ=18) aCGCGGGGCAACGGGTTCGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGca < 2:1861529/150‑1 (MQ=255) gtggggCACCGGGTTAGGGGAGGTCATCGACAGCGCGGGGGGCTAGGGCGGCCTGTTCGCGGGCACGCCCGCCCTTACATCGATCCGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGcaaa < 1:5376896/148‑1 (MQ=38) gtggggCAAGGGGTTCGGGGCGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGcaaa < 1:279677/148‑1 (MQ=255) gCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAATCCCCCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACaaaa > 2:3674447/1‑150 (MQ=255) gCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAACCCCCCCCGTACATCGATCACTGGAGGAG‑CGGGCGTGCCCGCGAACACGCCCCAGAAATCAAAAAACAACAAAGGCGTGGCAAACaaaa > 2:1691772/1‑150 (MQ=255) gCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCAGTTAGCGGGCCAGCCCCCCCATAAAAAGATCAGTGGAGGGG‑CCGGCATGCCCGCCAACACGCCCGAGAAATAAAAAAACAACAAAGGCCGGGCAAACaaaa > 2:1691739/1‑150 (MQ=255) aaCGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGTGGCCTGTTCGCCGGCCACCCCCCCCCAACAAACAACACGGTAGGAG‑CCGGCGTGCCCCCCAACACCCCCCCGAAATAAAAACACAACAAAGGCCTGGCCAACAAAAcc > 1:1658251/1‑149 (MQ=255) aCGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACgg < 1:3250443/150‑1 (MQ=255) gggTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGc < 2:195208/150‑1 (MQ=255) ttAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGATTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGa < 1:1990719/150‑1 (MQ=255) ttAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTCACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGa < 1:1727922/150‑1 (MQ=255) gAGGGCATCGACAGCTCGGGGGGCTAGGGCGGCCTGTGCGCGGGCAAGCCCGCCCTTACATCCCTCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATAc < 1:2988684/150‑1 (MQ=255) aGGTCATCGACTGCTGGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGAGCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:1395185/150‑1 (MQ=255) aGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCCGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:1149943/150‑1 (MQ=255) aCAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTc < 1:4005604/150‑1 (MQ=255) cAGCTCGGGTGGCTAGGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTcc < 2:5212003/150‑1 (MQ=255) cTCGGGTGGCTATGGCGGCCTGTTAGCGGGCAACCCCGCCCTTAAATAGATAAGTGTAGGAT‑CGGGCTTGCCCGCGAACACGCCCCTGAATTGAAAAAACAACAAAGGCGTGGGAAAAAAAACGGGCGGGAAAAAATGAACAAATcccgc > 2:4779801/1‑150 (MQ=255) tCGGGTGGCTATGGCGGCCTGTTAGCGGGCAACCCCGCCCATACAACGATCAGTGTTGGAG‑CGGGCTTGCCCCCCAACCGGCCCCAGAATTCAATACACAACAAAGGCGTTGCAAAAAAAACGGGCGGAAAATAATGAAAACCTaccgcc > 2:2677521/1‑150 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 2:427680/150‑1 (MQ=255) ggTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGt < 2:1085435/150‑1 (MQ=255) tGGCTTGGGCGGCGTGTTCGGGGGCAAGCCCGCCCTTACATCGATCTGTGTAGGAG‑GGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCa < 1:1044679/150‑1 (MQ=255) gCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAgg < 1:5260023/150‑1 (MQ=255) tGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCaaa < 1:4566751/150‑1 (MQ=255) ccTGTTCGCGGGCAAGCCCGCCCTTACATCGCTCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGaa < 1:4616414/150‑1 (MQ=255) ccTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGaa < 2:1459528/150‑1 (MQ=255) gggcgGGCTTGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTa > 1:12535/3‑150 (MQ=255) cgGGTAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa < 1:4575966/150‑1 (MQ=255) cgGGTAAGCCCGCCCTTACATCGATCAGGGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCa < 1:4575971/150‑1 (MQ=255) ggCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAgg > 1:5330070/1‑150 (MQ=255) aaGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 1:2178542/1‑150 (MQ=255) aaGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 2:5199141/1‑150 (MQ=255) gcccgctcCTACACTGATCGATGTAAGGG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCttt > 2:5617897/1‑150 (MQ=37) gcccgctcCTACACTGATCGATGTAAGGG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtgt > 2:3200596/1‑148 (MQ=37) cccgctcCTACACTGATCGATGTAAGGG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt > 2:1282627/1‑103 (MQ=18) cccgcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 1:4493070/1‑150 (MQ=255) cccgcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt < 2:2799708/150‑1 (MQ=255) cccgcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt < 2:2799749/150‑1 (MQ=255) cccgcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 2:1712035/1‑150 (MQ=255) ccgctcCTACACTGATCGATGTAAGGG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:4268691/1‑150 (MQ=37) ccgcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 1:3322631/1‑150 (MQ=255) gcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAg > 1:3783630/1‑150 (MQ=255) gcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAg > 1:2427946/1‑150 (MQ=255) gcccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAg > 1:4692724/1‑150 (MQ=255) ccTTACCTCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGCACACTTCCCGCCCGTCAGGCCAACACGAACTGTATCAGGCCTTTTCAGCt < 2:3415886/150‑1 (MQ=255) ccTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCt < 1:4006228/150‑1 (MQ=255) ttACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGCCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAt > 2:854165/1‑150 (MQ=255) | GCGGTTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAG‑CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAT > NC_002947/2478988‑2479284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |