Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 244,819 A→G 7.0% P165P (CCA→CCG)  algP → transcriptional regulator AlgP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947244,8190AG 7.0% 381.7 / 7.0 142P165P (CCA→CCG) algPtranscriptional regulator AlgP
Reads supporting (aligned to +/- strand):  ref base A (38/84);  new base G (8/2);  total (51/91)
Fisher's exact test for biased strand distribution p-value = 3.37e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

TCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCC  >  NC_002947/244672‑244966
                                                                                                                                                   |                                                                                                                                                   
tCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGc                                                                                                                                                   >  1:2634148/1‑150 (MQ=255)
tCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGc                                                                                                                                                   >  1:3830018/1‑150 (MQ=255)
tCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGAACGCTGCAGCCAAGCCTGCGGCCAAACCGGc                                                                                                                                                   >  2:1992265/1‑150 (MQ=255)
 cAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCt                                                                                                                                                  <  2:4272526/150‑1 (MQ=255)
 cAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCt                                                                                                                                                  <  2:3230611/150‑1 (MQ=255)
 cAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCt                                                                                                                                                  <  2:2094605/150‑1 (MQ=255)
    ggTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGTGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGcc                                                                                                                                               <  1:1663381/150‑1 (MQ=255)
           gTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGc                                                                                                                                                   >  2:1779916/1‑139 (MQ=255)
           gTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCAGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAggcga                                                                                                                                        >  2:1779924/1‑150 (MQ=255)
            tAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacgac                                                                                                                                       <  1:150403/150‑1 (MQ=255)
            tAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacgac                                                                                                                                       <  2:3867435/150‑1 (MQ=255)
            tAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacgac                                                                                                                                       <  2:1358901/150‑1 (MQ=255)
             aaaGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGAcc                                                                                                                                      <  2:3963313/150‑1 (MQ=255)
                gTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACt                                                                                                                                   >  2:1122057/1‑150 (MQ=255)
                 tACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGcc                                                                                                                                               >  1:337999/1‑137 (MQ=255)
                   cgcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgcc                                                                                                                                <  1:1595393/150‑1 (MQ=255)
                   cgcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgcc                                                                                                                                <  1:3785419/150‑1 (MQ=255)
                   cgcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgcc                                                                                                                                <  1:862301/150‑1 (MQ=255)
                        aGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCaa                                                                                                                           <  1:2148001/150‑1 (MQ=255)
                        aGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCaa                                                                                                                           <  2:2438432/150‑1 (MQ=255)
                               ggCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCACGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCACACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCg                                                                                                                    <  2:5303392/150‑1 (MQ=255)
                               ggCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCACGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCg                                                                                                                    <  2:4072819/150‑1 (MQ=255)
                                gCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCgg                                                                                                                   <  1:189120/150‑1 (MQ=255)
                                 cAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGc                                                                                                                  <  2:5377887/150‑1 (MQ=255)
                                    ggCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCaa                                                                                                               <  2:2163660/150‑1 (MQ=255)
                                     gCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCTACCGCTGCTGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGc                                                                                                                                                   <  2:2607363/113‑1 (MQ=255)
                                     gCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCAGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGc                                                                                                                                                   >  1:2607363/1‑113 (MQ=255)
                                      cccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAAc                                                                                                             <  2:1211384/150‑1 (MQ=255)
                                       ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGc                                                                                                                  >  1:1043347/1‑144 (MQ=255)
                                       ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGc                                                                                                                  <  2:1043347/144‑1 (MQ=255)
                                         ttGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCgg                                                                                                          <  1:4544080/150‑1 (MQ=255)
                                            aTCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTg                                                                                                       <  1:72257/150‑1 (MQ=255)
                                                aCGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCaa                                                                                                   <  2:933418/150‑1 (MQ=255)
                                                 cGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg                                                                                                  <  1:4474304/150‑1 (MQ=255)
                                                  gTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACTGGCTGCCAAgg                                                                                                 <  2:4883498/150‑1 (MQ=255)
                                                  gTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAgg                                                                                                 <  2:283929/150‑1 (MQ=255)
                                                  gTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGAACGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAgg                                                                                                 >  1:574557/1‑150 (MQ=255)
                                                   tGCGGCCAAACCGGCAGCCTAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGc                                                                                                <  2:3781645/150‑1 (MQ=255)
                                                   tGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGc                                                                                                <  2:2292035/150‑1 (MQ=255)
                                                     cGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGa                                                                                              <  1:1825651/150‑1 (MQ=255)
                                                        ccAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCGGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACGAGCTGCCAAGGGGACAACTCCCGCCAATCCTGCGGCCAAACCGGCTCCAAAGGCGACCg                                                                                           >  1:2112594/1‑150 (MQ=14)
                                                        ccAAACCGGCAGCCAAGGCAACCGCTGCAGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAACCGCTGCCAAGACGACCTCTGCCGGCAAGCCTGCGGCCGAAACCTCTGCCAAGGCGACCg                                                                                           >  1:3293015/1‑150 (MQ=14)
                                                          aaaCCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGACGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCATGGCGACCGCt                                                                                         >  1:364273/1‑150 (MQ=255)
                                                          aaaCCGGCAGCCAAGGCAACCGCTGCAGCCAAGCCTGCGGCCAAACCAGCTGCCACGGCGACCGCTGCAGCCAAGCCTGCGGCAAAACCAGCTGCCACGTCGTCCACTGCCGCCAAGCCTGAGGCCAAACCGGCTGGCAAGGCGGCCGcg                                                                                         >  2:2329893/1‑149 (MQ=14)
                                                             ccGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgcc                                                                                      <  2:2652895/150‑1 (MQ=255)
                                                              cGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgccg                                                                                     >  2:5482918/1‑150 (MQ=255)
                                                               ggCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGCCGACCGCTGCCGCCAAGCCGGCGGCCAAACCGGCGGCCCAGGCGACCGCTgccgc                                                                                    >  1:2022271/1‑150 (MQ=14)
                                                               ggCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgccgc                                                                                    <  1:3297018/150‑1 (MQ=255)
                                                                   gcgcaGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGACTTCGGCAGATCCAGCTGGCAAGACGAACACTGCAGCCCTGCCTGCGGCCAAACCGGCTGCCAAGGCGAACGCTGCCGCCagg                                                                                >  2:537220/5‑148 (MQ=17)
                                                                   gCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCaaa                                                                                >  1:3535145/1‑150 (MQ=255)
                                                                   gCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCCGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCaag                                                                                >  1:3667413/1‑149 (MQ=255)
                                                                     cAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGcag                                                                                                    >  2:659751/1‑126 (MQ=255)
                                                                     cAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGcag                                                                                                    <  1:659751/128‑3 (MQ=255)
                                                                      atggCAACCGCTGCTGCCTATGGTGCGTCCTAACCAGCTGCCTGGGCGACCGCTGCCGCCAATCGTGCGGCCAAACCTGCTGCCAAGTCGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCt                                                                             <  2:5124955/148‑1 (MQ=14)
                                                                        ggCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGc                                                                           <  1:489123/150‑1 (MQ=255)
                                                                        ggCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCAGCCAAGCCTGCGGCCAAACCGGCTGCCAAGCCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGc                                                                           >  1:190746/1‑150 (MQ=11)
                                                                          cAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCgg                                                                         <  1:5429437/150‑1 (MQ=255)
                                                                           aaCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc                                                                        >  1:2527467/1‑150 (MQ=2)
                                                                           aaCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACAGCTGCCGCCAAGCATGCGGCCAAACCAGCTGCCAAGACGACCACTGCAGCCAAGCCTGAGGCCAAACCGGCTGCAAAGGCGACCGCTGAAGCCAAACCTGCGGc                                                                        >  2:95829/1‑150 (MQ=17)
                                                                            aCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACAGCTGCCGCACAGCCTGCGGcc                                                                       >  2:4660800/1‑150 (MQ=14)
                                                                            aCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGcc                                                                       <  2:3306586/150‑1 (MQ=255)
                                                                               gctgctGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCGACGCCTGCGGCCagg                                                                    >  1:4038880/1‑148 (MQ=255)
                                                                                   ctgcCAAGCCTGCGGCCTAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCgg                                                                <  2:1348549/150‑1 (MQ=255)
                                                                                          gCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCaa                                                         <  1:5482918/150‑1 (MQ=255)
                                                                                          gCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCaa                                                         <  2:2989419/150‑1 (MQ=255)
                                                                                           ccTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCGGCCAAg                                                        >  1:3029100/1‑150 (MQ=255)
                                                                                            cTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAgg                                                       <  1:4304155/150‑1 (MQ=255)
                                                                                                       cctgCTGCCAGGGCGACCTCTGCCGCCAAGCCTGCTCCCAAACCCGCTGCCAAGCCGACCTCCGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCTACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAATGCGACCGCTgcc                                            <  2:799744/147‑1 (MQ=11)
                                                                                                       ccAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGCCGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAACCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgcc                                            <  2:3252319/150‑1 (MQ=255)
                                                                                                       ccAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgcc                                            <  2:515122/150‑1 (MQ=255)
                                                                                                              ccAGGGCGAACGCTGCCGCCCAGCCTGCGGCCAAACCAGCTGCCAAGTCGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGc                                     <  1:1879369/150‑1 (MQ=255)
                                                                                                                aGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCt                                   >  2:3522946/1‑150 (MQ=255)
                                                                                                                  ggCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGc                                 <  1:2095140/150‑1 (MQ=255)
                                                                                                                   gCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCTCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCg                                <  2:1300557/150‑1 (MQ=255)
                                                                                                                   gCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCAAAACCTGCGGCCAAACCGGCTGCCAACGCGACGGCTGCCGCCAAGCCTGCg                                >  1:2992647/1‑150 (MQ=255)
                                                                                                                    cGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCgg                               <  1:3206490/150‑1 (MQ=255)
                                                                                                                    cGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCgg                               <  1:3206642/150‑1 (MQ=255)
                                                                                                                     gACCGCTGCCGCCTAGCCTGCGGCCAAACCAGCTGCCACGACGACCCCTGCCGACATGCGTGCGGCCATACCCGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc                              <  2:299223/150‑1 (MQ=14)
                                                                                                                     gACCGCTGCAGCCTAGCCTGCGGCCAAACCAGCTGCCAAGACGACCTCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc                              <  1:2734553/150‑1 (MQ=255)
                                                                                                                      aCCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCAAAGGCGACCGCTGCCGCCAAGCCTGCGGcc                             >  1:3255736/1‑150 (MQ=255)
                                                                                                                          cTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGCCGACCCCTGCCGCCACGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAACCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAc                         <  2:1511993/150‑1 (MQ=255)
                                                                                                                          cTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc                              <  1:2069816/145‑1 (MQ=255)
                                                                                                                          cTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc                              >  2:2069816/1‑145 (MQ=255)
                                                                                                                          cTGCAGACAATCCTGCGGCCTAACCAGATGCCAAGACGACCACTGCCGCGAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAc                         <  1:5108172/150‑1 (MQ=14)
                                                                                                                           tGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAGGTCGAACACTGCCGCCAATCCTGCGGCCAAACCGGCTGACATGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCGAGGCCTGCGGCCAAAcc                        >  1:4830244/1‑150 (MQ=11)
                                                                                                                           tGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGCCGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAcc                        <  1:2645919/150‑1 (MQ=255)
                                                                                                                           tGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAACCCTGCGGCCAACCCGGCTGCCACGGCGACAGCGGCCGCCAACCCTGCGGcctcggc                        >  1:4221935/1‑145 (MQ=14)
                                                                                                                           tGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAcc                        <  1:1217763/150‑1 (MQ=255)
                                                                                                                               gccAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCCAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCGGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAACCCGGCt                    >  2:4862689/1‑150 (MQ=255)
                                                                                                                               gacAATCCTGCGGCCAAACCAGCTGCCAAGCCGACCTCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCt                    <  1:903990/148‑1 (MQ=255)
                                                                                                                                    gCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCaa               <  2:1629394/150‑1 (MQ=255)
                                                                                                                                     ccTGCGGCCAAACCAGCTGCCAAGCCGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg              <  2:5310596/150‑1 (MQ=255)
                                                                                                                                     ccTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg              <  1:3522946/150‑1 (MQ=255)
                                                                                                                                      cTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAATCGGCTGCCAAgg             >  2:1244511/1‑150 (MQ=255)
                                                                                                                                       agCGGCCAAACCAGCTGCCAAGACGACCACAGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGc            <  2:3830018/149‑1 (MQ=255)
                                                                                                                                            ccAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCGGCCAAGGCGACCg       >  2:371462/1‑150 (MQ=255)
                                                                                                                                            ccAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCg       >  1:3894337/1‑150 (MQ=255)
                                                                                                                                            ccAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCg       >  1:207690/1‑150 (MQ=255)
                                                                                                                                              aaaCCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCt                    <  2:346959/135‑1 (MQ=255)
                                                                                                                                              aaaCCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCt                    >  1:346959/1‑135 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCC  >  NC_002947/244672‑244966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑