| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,750,167 | G→T | 7.6% | intergenic (+18/+17) | PP_2399 → / ← PP_2400 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,750,167 | 0 | G | T | 7.6% | 657.5 / 30.0 | 208 | intergenic (+18/+17) | PP_2399/PP_2400 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (96/96); new base T (6/10); total (102/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 225 total aligned reads displayed.
TGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGC > NC_002947/2750019‑2750315 | ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 1:1177080/150‑1 (MQ=255) ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 2:1962351/150‑1 (MQ=255) ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 1:2059481/150‑1 (MQ=255) gCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcag > 1:1435413/1‑150 (MQ=255) gTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcagct > 1:2701667/1‑149 (MQ=255) gTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcagca < 2:3678386/150‑1 (MQ=255) tATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGcagcag > 1:1621759/1‑150 (MQ=255) aTCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCagcagc > 2:2089537/1‑150 (MQ=255) tCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGcc < 1:2807330/150‑1 (MQ=255) gTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGccccc > 1:1462701/1‑150 (MQ=255) tGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGcccccca < 1:5341778/150‑3 (MQ=255) cTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGccccccaat < 1:518471/150‑5 (MQ=255) cTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATc > 1:1726986/1‑150 (MQ=255) tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATcc > 2:4438963/1‑150 (MQ=255) tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATcc > 2:793833/1‑150 (MQ=255) gAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATc > 2:4035297/1‑150 (MQ=255) cAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCATGGTTTGGAATTGCTGGAAGCTTTTCGCGAGCCGGGTGTCTTTGTCGGAACAGTGTGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGc < 1:896500/150‑1 (MQ=255) gggACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGa > 1:243505/1‑150 (MQ=255) gACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAAc > 1:4511253/1‑150 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGcccccc < 1:4023156/130‑2 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGc > 1:3203790/1‑150 (MQ=255) gAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCAt > 2:2258317/1‑150 (MQ=255) gagCGGCTGCAGGCAGTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGACGCATTTCGCGAGCCGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCa < 2:5616280/150‑1 (MQ=255) gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc > 2:1403286/1‑150 (MQ=255) gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc < 2:3868128/150‑1 (MQ=255) gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc < 2:892343/150‑1 (MQ=255) gCTGCAGGCATTGGGCGGGGTTGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGATGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCaa < 2:2523427/150‑1 (MQ=255) tGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCGGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATg > 1:743761/1‑150 (MQ=255) cAGGCTTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGAt < 2:307304/150‑1 (MQ=255) gcttggggCGGGGATGTGCAGCACGGGTTGGCATTGCTGGAAGCATTTCGCGAGCCGGGTGTCATTGTCGGAACCGTGTGAAGGAATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 2:2041362/145‑1 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa > 1:1035116/1‑150 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa > 1:4779854/1‑150 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 2:5104187/150‑1 (MQ=255) aTTGGGCGGGGATGTGCAGCATGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 2:3585586/150‑1 (MQ=255) aTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 2:4613055/150‑1 (MQ=255) ttGGGCGGGGATGTGCAGCATGGGTTGGCATTGCTGTAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGc < 2:1617103/150‑1 (MQ=255) tGGGCGGGGATGTGCAGCATGGGTTGGCTTTGCTGGAAGCATTTCGCGAGCTGGGTTTCATTGTCGGAACTGTTTGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCt < 1:376248/150‑1 (MQ=255) tgCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggc < 2:1810355/150‑1 (MQ=255) gcagctCGGGTTGGCTTGGCTGTAAGCTTTTCGCGAGCTGGGTGTCATTGTCGTAACAGGTTGACGGCTTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcg < 1:3811087/150‑1 (MQ=255) cagcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgc < 2:4551772/150‑1 (MQ=255) agcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgcc > 1:5440247/1‑150 (MQ=255) gcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgccc > 2:574634/1‑150 (MQ=255) catgggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAG‑CCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 1:3691841/147‑1 (MQ=255) acgggTTGGCTTTGCTGCAAGAATTGGGCGTGCTGGGTGTCTTTGTCGTAACTTTGTGACGGCTTGGGGGGGCTGCGCACCCGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 1:3380032/148‑1 (MQ=255) aaGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGGGTCTTTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgccgggcgcctta < 2:5242644/150‑4 (MQ=255) aGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTg < 2:467738/150‑1 (MQ=255) gggTTGGCTTTGCTTGAAGCTGTGCGCGCGCTGGGTGTCTTTGTCGCAACTGTGTGATGGCTTGGGGGGGCTGGGCCCCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:4245412/150‑1 (MQ=255) gggTTGGCATTGCTGTAAGCATTTCGCGTGCTGGGTGTATTTGTCGTAACAGGGTTCCGGCTTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:2114670/150‑1 (MQ=255) gggTTGGCATTGCTGGCAGCAGGTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 2:4769551/150‑1 (MQ=255) ttGGCATTGCTGCAAGCATTGCGCGAGCTGGGTGTCTTTGGCGCAACTGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagca < 1:3532262/150‑1 (MQ=255) ttGGAATTGCTGGAAGCATTTCGCGAGCCGGGTGTCATTGTCGGAACTGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagca < 1:1253789/150‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCCTGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt < 2:4131988/150‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 2:137571/1‑150 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt < 2:5429882/150‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 2:5490071/1‑150 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 1:3282705/1‑150 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 1:1225507/1‑150 (MQ=255) ttGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTg > 2:3737943/1‑150 (MQ=255) ttGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTg < 2:3464464/150‑1 (MQ=255) cTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgca < 2:323837/150‑1 (MQ=255) aGCATTTCGCGAGCAGGGTGTCTTTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAAc < 1:3633755/150‑1 (MQ=255) aTTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGcc > 2:393923/1‑150 (MQ=255) aTTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGcc < 2:3574332/150‑1 (MQ=255) ggAGCTGGGTGTCATTGTCGGAACTGTGGTAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 1:3576013/149‑1 (MQ=255) cgAGCAGGGTGTCATGGTCGGAACAGTGTGAAGGCATTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 1:5419793/150‑1 (MQ=255) cAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGa > 2:4271411/1‑150 (MQ=255) cATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGc > 1:2168804/1‑150 (MQ=255) ggAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGaa > 1:4125800/1‑58 (MQ=255) ggAACAGGGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGt < 1:1428166/150‑1 (MQ=255) aaCAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTaa > 1:180458/1‑150 (MQ=255) actgtgtGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAt < 1:1499176/147‑1 (MQ=255) ccgtgtGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt < 2:3426205/148‑1 (MQ=255) cAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt > 2:3583519/1‑150 (MQ=255) gtgtGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGc < 2:1716178/150‑1 (MQ=255) tgtgAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGcc > 1:6990/1‑150 (MQ=255) gtgAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCg < 2:14812/150‑1 (MQ=255) gAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGaa < 2:739443/150‑1 (MQ=255) aaGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAg < 2:1435110/150‑1 (MQ=255) aGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGc > 1:3157093/1‑150 (MQ=255) ggCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGcc > 2:3020714/1‑150 (MQ=255) cATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGACCAGCGGCAACTTGTAATTGCCGAAGCCCt < 2:4252599/150‑1 (MQ=255) gatcgggggCTGCTGCGCAGCCCCCCATACACAACAGCCGAACCCCAAGCGCAGCCAAAGATAGAGGCGAAGGCGCCCCGCGCCCATGAGCAGCACTGGCAGCAACGCCAACAGGTAGATCAGCGGCAACTTGTAATTTCCCAATcccag > 2:851741/5‑148 (MQ=255) aTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTg > 1:594708/1‑150 (MQ=255) aTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTg > 2:2870306/1‑150 (MQ=255) aTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTg < 2:3640106/150‑1 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagcag > 2:1596504/1‑88 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt > 1:4628767/1‑133 (MQ=255) ggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTa > 2:4907959/1‑150 (MQ=255) gcggcgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTaa < 1:2174778/147‑1 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTa > 2:1222212/1‑126 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAAt > 2:267279/1‑150 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAAt > 1:753651/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCACCTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:3863857/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:2622728/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 2:3295027/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg < 1:4185584/150‑1 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:4674222/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg < 1:4185574/150‑1 (MQ=255) gcgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATgg < 1:1408923/150‑1 (MQ=255) cgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGc > 2:5168883/1‑150 (MQ=255) | TGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGC > NC_002947/2750019‑2750315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |