| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,750,169 | A→C | 9.2% | intergenic (+20/+15) | PP_2399 → / ← PP_2400 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,750,169 | 0 | A | C | 9.2% | 574.7 / 35.9 | 211 | intergenic (+20/+15) | PP_2399/PP_2400 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (96/93); new base C (6/15); total (102/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
GGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATA > NC_002947/2750020‑2750318 | ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 1:1177080/150‑1 (MQ=255)ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 2:1962351/150‑1 (MQ=255)ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 1:2059481/150‑1 (MQ=255) gCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcag > 1:1435413/1‑150 (MQ=255) gTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcagct > 1:2701667/1‑149 (MQ=255) tATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGcagcag > 1:1621759/1‑150 (MQ=255) gTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGccccc > 1:1462701/1‑150 (MQ=255) cTGGTGGCGCTGGGGACCGGAATAGCGCGGCTCTCGGCTTTGGGGGGGGTTGTGCAGCATGGTTTGGCTTGGGTGGACGCTTTGGGCGAGCTGGTTGTCTTTGTGGTAACCGTGTGACGGATTTGGGGGGCTGCGCAGCAGCCCCCGATc < 2:3929997/150‑1 (MQ=255) cTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGccccccaat < 1:518470/150‑5 (MQ=255) cTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATc > 1:1726986/1‑150 (MQ=255) cTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTCGGGGGCTGCTGCGCAGccccccaat < 2:2856440/150‑5 (MQ=255) tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATcc > 2:793833/1‑150 (MQ=255) gtggAGCTGGGGACGGGAAGAGTGCGGCTGCAGGCATTGGGCGGGGTTGTGCAGCATGGGTTGGCATTGCTGGAAGCATTTCGCGAGCTGGGTGTCATTGTCGTAACAGTGTGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTc < 2:4448592/150‑1 (MQ=255) gtggAGCAGGGGACCGGAAGAGAGCGGATGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTc > 1:5260770/1‑150 (MQ=255) cAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGAAAGGGTTGGCTTTGCTGGAAGCATTTCGCGAGCTGGGTGTCATTGTCGGACCTGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGc < 1:896280/150‑1 (MQ=255) aGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGcc < 2:5508081/150‑1 (MQ=255) ggggACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCg > 1:5612078/1‑150 (MQ=255) gggACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGa > 1:243505/1‑150 (MQ=255) gACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAAc > 1:4511384/1‑150 (MQ=255) cGGATGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGCGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGc < 1:3205775/150‑1 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGcccccc < 1:4023156/130‑2 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGcccccc > 2:4023156/1‑129 (MQ=255) gAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCAt > 2:2258317/1‑150 (MQ=255) gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc > 2:1403286/1‑150 (MQ=255) gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc < 2:892343/150‑1 (MQ=255) gCTGCAGGCATTGGGCGGGGTTGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGATGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCaa < 2:2523427/150‑1 (MQ=255) tGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCGGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATg > 1:743761/1‑150 (MQ=255) cAGGCTTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGAt < 2:307304/150‑1 (MQ=255) aGGCTTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCTTTGTCGGAACCGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATc < 2:4710339/150‑1 (MQ=255) gcttggggCGGGGATGTGCAGCACGGGTTGGCATTGCTGGAAGCATTTCGCGAGCCGGGTGTCATTGTCGGAACCGTGTGAAGGAATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 2:2041362/145‑1 (MQ=255) gCATTGGGCGGGGATGTGCAGCACGGGTGGGCATTGCTGGAAGCATTTCGCGAGCTGGGTGTCATTGTCGGAACAGTGTGAAGGCTTTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 1:2253380/150‑1 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa > 1:1035116/1‑150 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa > 1:4779854/1‑150 (MQ=255) tttGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 2:5171308/149‑1 (MQ=255) aTTGGGCGGGGATGTGCAGCACGGGTTGGCATTGCTGGATGCATTGCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCAGTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 2:3721238/150‑1 (MQ=255) aTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 2:4183371/150‑1 (MQ=255) ttGGGCGGGGATGTGCAGCATGGGTTGGCATTGCTGTAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGc < 2:1617103/150‑1 (MQ=255) tgCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggc < 2:1810355/150‑1 (MQ=255) agcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgcc > 1:5440247/1‑150 (MQ=255) catgggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAG‑CCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 1:3691841/147‑1 (MQ=255) acgggTTGGCTTTGCTGCAAGAATTGGGCGTGCTGGGTGTCTTTGTCGTAACTTTGTGACGGCTTGGGGGGGCTGCGCACCCGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 1:3380032/148‑1 (MQ=255) aaGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgccgggcgcctta < 2:5242651/150‑4 (MQ=255) aGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTg > 1:3810687/1‑150 (MQ=255) gggTTGGCTTTGCTTGAAGCTGTGCGCGCGCTGGGTGTCTTTGTCGCAACTGTGTGATGGCTTGGGGGGGCTGGGCCCCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:4245412/150‑1 (MQ=255) gggTTGGCTTTGCTGTAAGATTTCCGCGCGCTGGGTGCCTTTGTGGGAACCGTGTGAAGGCTTGGGGGGGCTGCGCCGCCGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:619028/150‑1 (MQ=255) gggTTGGCATTGCTGTAAGCATTTCGCGTGCTGGGTGTATTTGTCGTAACAGGGTTCCGGCTTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:2114670/150‑1 (MQ=255) gggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCTTTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 2:571071/150‑1 (MQ=255) ttGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagca > 2:5118393/1‑150 (MQ=255) ttGGAATTGCTGGAAGCATTTCGCGAGCCGGGTGTCATTGTCGGAACTGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagca < 1:1253789/150‑1 (MQ=255) tgggCTTTGCTGGAAGCTTTTCGCGCGCTGGGTTTCTTTGTCGTAACTGTTTGACGGCTTGGGGGGGGTGCGCCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagca < 1:191557/148‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 2:137571/1‑150 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 1:4283916/1‑150 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 1:1225507/1‑150 (MQ=255) ttGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTg < 2:3464464/150‑1 (MQ=255) cTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgca > 2:63243/1‑150 (MQ=255) cTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgca < 2:323837/150‑1 (MQ=255) tGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgcag > 2:2088019/1‑150 (MQ=255) aGCATTTCGCGAGCAGGGTGTCTTTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAAc < 1:3633755/150‑1 (MQ=255) cATTTCGCGAGCTGGGTGTATTTGTCGGAACTGTGTGATGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGc < 2:403692/150‑1 (MQ=255) cATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGc < 2:5440247/150‑1 (MQ=255) aTTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGcc < 2:3574365/150‑1 (MQ=255) cgAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGTGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 2:4778435/150‑1 (MQ=255) cgAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 1:4148656/150‑1 (MQ=255) cgAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 2:3268984/150‑1 (MQ=255) cgAGCAGGGTGTCATGGTCGGAACAGTGTGAAGGCATTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 1:5419793/150‑1 (MQ=255) cgctgggTGTCTGTGTCGGAACTGTGTGTAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTa < 1:2912975/146‑1 (MQ=255) gggTGTCATTGTCGTAACAGTGTGAAGGCTTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCCTCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgcaaccga < 2:3603402/150‑8 (MQ=255) tgtCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGc > 2:1409000/1‑150 (MQ=255) tgtCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGc < 2:5086823/150‑1 (MQ=255) cATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGc > 1:2168804/1‑150 (MQ=255) ggAACAGGGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGt < 1:1428166/150‑1 (MQ=255) aaCAGTTTTAAGTCTTTGGGGGGCTGCGATGAAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTaa < 1:4037824/150‑1 (MQ=255) aaCAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTaa > 2:3839794/1‑150 (MQ=255) actgtgtGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAt < 1:1499176/147‑1 (MQ=255) ccgtgtGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt < 2:3426205/148‑1 (MQ=255) cAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt > 2:3583519/1‑150 (MQ=255) cAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt > 2:456314/1‑150 (MQ=255) aGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTg > 1:3409960/1‑150 (MQ=255) gtgAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCg < 2:14812/150‑1 (MQ=255) gcaGGCAGTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCCGCCAAGGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGAACAGCGGCAACTTGTAATGGCCGaa < 2:4271601/148‑1 (MQ=255) gAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGaa < 2:1665538/150‑1 (MQ=255) gAAGGATTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGaa < 1:3037711/150‑1 (MQ=255) aGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGc > 1:3157102/1‑150 (MQ=255) ggCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGcc > 2:3020714/1‑150 (MQ=255) gCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGccc < 1:3546594/150‑1 (MQ=255) cATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGACCAGCGGCAACTTGTAATTGCCGAAGCCCt < 2:4252604/150‑1 (MQ=255) gatcgggggCTGCTGCGCAGCCCCCCATACACAACAGCCGAACCCCAAGCGCAGCCAAAGATAGAGGCGAAGGCGCCCCGCGCCCATGAGCAGCACTGGCAGCAACGCCAACAGGTAGATCAGCGGCAACTTGTAATTTCCCAATcccag > 2:851741/5‑148 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGagcag > 2:1596504/1‑88 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAAtt < 2:4628767/133‑1 (MQ=255) ggggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCgg < 2:3669378/150‑1 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTa > 2:1222212/1‑126 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAAt > 2:267279/1‑150 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAAt > 1:753651/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCACCTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:3863857/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg < 1:4185584/150‑1 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:4674222/1‑150 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg > 1:2622728/1‑150 (MQ=255) gcgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATgg < 1:1408923/150‑1 (MQ=255) gcgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATgg > 1:3756837/1‑150 (MQ=255) agcagcCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATa > 1:1580861/1‑150 (MQ=255) | GGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATA > NC_002947/2750020‑2750318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |