BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,781,992	C→G	5.0%	A169P (GCA→CCA)	PP_2429 ←	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,781,992	0	C	G	5.0%	1001.8 / 29.1	294	A169P (GCA→CCA)	PP_2429	membrane protein
Reads supporting (aligned to +/- strand): ref base C (159/119); new base G (7/8); total (167/127)
Fisher's exact test for biased strand distribution p-value = 4.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 302 total aligned reads displayed.

CGGCGCTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGAC  >  NC_002947/2781843‑2782139

 ggCGCTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGcc                                                                                                                                                    >  1:2186270/1‑150 (MQ=255)

 ggCGCTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGcc                                                                                                                                                    >  1:3228221/1‑150 (MQ=255)

 ggCGCTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGcc                                                                                                                                                    >  2:1069755/1‑150 (MQ=255)

   cgcTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTg                                                                                                                                                  <  1:2761997/150‑1 (MQ=255)

    gcgttCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGc                                                                                                                                                 <  1:1968772/147‑1 (MQ=255)

      tttCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAg                                                                                                                                               >  2:1747437/1‑150 (MQ=255)

           cgAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGTAGCCAcc                                                                                                                                          >  2:3554652/1‑150 (MQ=255)

              ggCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGGCTGCAGGCACCggg                                                                                                                                       <  1:1339469/150‑1 (MQ=255)

              ggCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCggg                                                                                                                                       <  2:862967/150‑1 (MQ=255)

              ggCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCggg                                                                                                                                       <  2:5278442/150‑1 (MQ=255)

               gCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGgc                                                                                                                                      <  1:1567708/150‑1 (MQ=255)

                 gTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGgcgc                                                                                                                                    <  2:412729/150‑1 (MQ=255)

                 gTTGACACGATGAGCCGAGGCCGCTCAGGCCCCATGTCGGACAAGAACAGGCTCAGGCCAATACAGCAGCCAAAGCCGATATCAACAAAACCCCCGCCAACACGTGGATGAACACCCGCAACCGCCCCGGTGCCTGCCCCCACCgcgcgc                                                                                                                                    >  2:3648760/1‑150 (MQ=255)

                     acacGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCGATGCCGATATCAACAAAACCACCGCCAACACTTGGTTGAACACCCGCAACCGACCCGGTGGCTGCAGCCACCGGGCGCTcac                                                                                                                                >  2:4431475/1‑148 (MQ=255)

                     acacGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTccc                                                                                                                                >  2:4479249/1‑150 (MQ=255)

                     acacGGTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTccc                                                                                                                                >  2:815745/1‑150 (MQ=255)

                      cacGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTcccc                                                                                                                               <  2:687393/150‑1 (MQ=255)

                         gTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCCGGCGCGCCCCAcc                                                                                                                            >  1:2928726/1‑150 (MQ=255)

                          ttGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCAccc                                                                                                                           >  2:1546595/1‑150 (MQ=255)

                           tGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCAcccc                                                                                                                          <  2:4142545/150‑1 (MQ=255)

                              gCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCaa                                                                                                                       >  1:3555774/1‑150 (MQ=255)

                               ccGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCG‑CCCGGTGGCTGCAGGCACCggggcg                                                                                                                                    <  1:2241807/135‑4 (MQ=255)

                               ccGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCG‑CCCGGTGGCTGCAGGCACCggggcg                                                                                                                                    >  2:2241722/1‑132 (MQ=255)

                                    gCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGc                                                                                                                 >  2:3147678/1‑150 (MQ=255)

                                       gCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCa                                                                                                              <  1:898451/150‑1 (MQ=255)

                                            ggCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAggcgg                                                                                                         <  1:726801/150‑1 (MQ=255)

                                             gCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAggcggc                                                                                                        >  2:273789/1‑150 (MQ=255)

                                             gCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAggcggc                                                                                                        >  1:4012628/1‑150 (MQ=255)

                                               cccTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCa                                                                                                      <  1:2035628/150‑1 (MQ=255)

                                               cccTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCCCCCAGGCGGCCa                                                                                                      >  2:1831558/1‑150 (MQ=255)

                                                    gTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTc                                                                                                 <  2:4345732/150‑1 (MQ=255)

                                                      cGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCgg                                                                                               <  1:4307590/150‑1 (MQ=255)

                                                       ggTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGc                                                                                              >  1:2787604/1‑150 (MQ=255)

                                                       ggTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGc                                                                                              >  2:3504730/1‑150 (MQ=255)

                                                       ggTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGc                                                                                              >  2:5380441/1‑150 (MQ=255)

                                                        gTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCa                                                                                             <  2:1253355/150‑1 (MQ=255)

                                                        gTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCAGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCAAGCTCGGCa                                                                                             >  2:2130148/1‑150 (MQ=255)

                                                         tCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCag                                                                                            >  1:416361/1‑150 (MQ=255)

                                                          cAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACGTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCaga                                                                                           <  2:3984843/150‑1 (MQ=255)

                                                           aaGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCagag                                                                                          <  1:5021008/150‑1 (MQ=255)

                                                             gTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAACACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCg                                                                                        <  1:619817/150‑1 (MQ=255)

                                                             gTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCg                                                                                        <  2:1438357/150‑1 (MQ=255)

                                                             gTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCg                                                                                        >  2:3056493/1‑150 (MQ=255)

                                                             gTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCACGGCAGAGCg                                                                                        >  1:687706/1‑150 (MQ=255)

                                                              tAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGa                                                                                       <  1:3147678/150‑1 (MQ=255)

                                                              tAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGa                                                                                       >  2:2909952/1‑150 (MQ=255)

                                                               agagGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGAt                                                                                      <  2:3714402/150‑1 (MQ=255)

                                                                 agGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCa                                                                                    <  1:5452066/150‑1 (MQ=255)

                                                                     tCAGGCCATTACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCaa                                                                                <  2:56405/150‑1 (MQ=255)

                                                                     tCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCCCCCCCAACACCGCCCAGGCGGCCAAGCTCGGCAGAGCGATCAGCaa                                                                                >  1:19214/1‑150 (MQ=255)

                                                                     tCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCaa                                                                                >  1:5198528/1‑150 (MQ=255)

                                                                     tCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCG‑CCCGGTGCCTGCAGCCACCGGGCGCTCCCCCCCCCCAACCCCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAg                                                                               >  1:2347051/1‑150 (MQ=255)

                                                                       aGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGa                                                                              >  1:844067/1‑150 (MQ=255)

                                                                         gCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCACCACTTGGTTGAACCCCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCCGGCGGCCATGCTCGGCAGCGCGATCAGCAAGAac                                                                            >  2:2991009/1‑150 (MQ=255)

                                                                         gCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAac                                                                            >  1:3062848/1‑150 (MQ=255)

                                                                           cAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACCCCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAacac                                                                          >  1:3829447/1‑150 (MQ=255)

                                                                            aaTACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCACGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACAcc                                                                         >  1:1047357/1‑150 (MQ=255)

                                                                               aCTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAgc                                                                      <  1:2967530/150‑1 (MQ=255)

                                                                                 tGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAgcgc                                                                    >  2:2513618/1‑150 (MQ=255)

                                                                                 tGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAgcgc                                                                    <  2:4214099/150‑1 (MQ=255)

                                                                                  gCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGcc                                                                   >  1:3015778/1‑150 (MQ=255)

                                                                                    aGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAg                                                                 <  1:269430/150‑1 (MQ=255)

                                                                                    aGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAg                                                                 <  2:2264361/150‑1 (MQ=255)

                                                                                      cccATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCt                                                               >  1:1078558/1‑150 (MQ=255)

                                                                                       ccATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTg                                                              >  2:515878/1‑150 (MQ=255)

                                                                                       ccATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTg                                                              >  1:5395406/1‑150 (MQ=255)

                                                                                         aTGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGcc                                                            >  2:3805232/1‑150 (MQ=255)

                                                                                          tGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCca                                                           >  2:912096/1‑150 (MQ=255)

                                                                                          tGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCca                                                           >  2:1699931/1‑150 (MQ=255)

                                                                                          tGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCca                                                           >  2:4535948/1‑150 (MQ=255)

                                                                                              gATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTc                                                                                                 <  2:3307584/108‑1 (MQ=255)

                                                                                               atatCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTg                                                      <  2:5198528/150‑1 (MQ=255)

                                                                                                 atCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGc                                                    >  2:2354438/1‑150 (MQ=255)

                                                                                                   caacaaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATACTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCaa                                                  <  1:5324294/150‑1 (MQ=255)

                                                                                                     acaaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAccg                                                >  2:5571877/1‑150 (MQ=255)

                                                                                                     acaaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCAGCCACACTGGCAacg                                                >  1:3399223/1‑150 (MQ=255)

                                                                                                      caaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCCCCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCCTGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAacga                                               >  1:3647435/1‑150 (MQ=255)

                                                                                                      caaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGcc                                                                                                       <  1:5051772/94‑1 (MQ=255)

                                                                                                      caaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGcc                                                                                                       >  2:5051772/1‑94 (MQ=255)

                                                                                                      caaAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAacga                                               <  1:515878/150‑1 (MQ=255)

                                                                                                           cccccGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGgcg                                          <  1:2496655/150‑1 (MQ=255)

                                                                                                           cccccGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGgcg                                          >  2:4949848/1‑150 (MQ=255)

                                                                                                            ccccGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCCAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGgcgc                                         >  1:4783644/1‑150 (MQ=255)

                                                                                                             cccGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGcgcg                                        >  2:1132028/1‑150 (MQ=255)

                                                                                                                  cAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCaaa                                   >  1:460592/1‑150 (MQ=255)

                                                                                                                    acacTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATa                                 >  1:3352537/1‑150 (MQ=255)

                                                                                                                       cTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATAccc                              <  1:4479420/150‑1 (MQ=255)

                                                                                                                       cTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATAccc                              >  1:4619041/1‑150 (MQ=255)

                                                                                                                       cTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCAATGCTCTGAAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATAccc                              <  1:4431475/150‑1 (MQ=255)

                                                                                                                        ttGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATAcccc                             <  1:1848633/150‑1 (MQ=255)

                                                                                                                                    ccGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCAc                 >  2:2061903/1‑150 (MQ=255)

                                                                                                                                    ccGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACAGGCAACGACGGCGCGGCAAATACCCCGACCACCGcccc                 >  1:980737/1‑148 (MQ=255)

                                                                                                                                    ccGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGAACAGCAACAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCAc                 >  1:4969974/1‑150 (MQ=255)

                                                                                                                                        aaCCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGcc             <  1:825532/150‑1 (MQ=255)

                                                                                                                                            gCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCa         >  1:1666339/1‑150 (MQ=255)

                                                                                                                                             ccccGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACCCCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGcc             <  2:1933159/145‑1 (MQ=255)

                                                                                                                                              cccGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAAc       <  1:4643367/150‑1 (MQ=255)

                                                                                                                                                cGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCa     <  2:4829477/150‑1 (MQ=255)

                                                                                                                                                cGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCa     >  1:3797440/1‑150 (MQ=255)

                                                                                                                                                cGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCa     >  2:339548/1‑150 (MQ=255)

CGGCGCTTTCGCGAGGCGTTGACACGTTGAGCCGAGGCCGCTCAGGCCCCTTGTCGGTCAAGTAGAGGCTCAGGCCAATACTGCAGCCCATGCCGATATCAACAAAACCCCCGCCAACACTTGGTTGAACACCCGCAACCGCCCCGGTGCCTGCAGCCACCGGGCGCTCCCCACCCCCAACACCGCCCAGGCGGCCATGCTCGGCAGAGCGATCAGCAAGAACACCAGCGCCAGCTGCCACACTGGCAACGACGGCGCGGCAAATACCCCGACCACCGCCACGGCCATCAACCAGAC  >  NC_002947/2781843‑2782139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`