| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,821,586 | T→A | 5.8% | I21N (ATT→AAT) | PP_2472 → | MerR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,821,586 | 0 | T | A | 5.8% | 920.7 / 31.5 | 288 | I21N (ATT→AAT) | PP_2472 | MerR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (130/139); new base A (10/7); total (141/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01 | |||||||||||
Only 100 of 303 total aligned reads displayed.
CCCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGC > NC_002947/2821437‑2821735 | ccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCAtt < 2:2113268/150‑1 (MQ=255) ccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCAtt < 1:490567/150‑1 (MQ=255) ccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCAtt < 2:4944396/150‑1 (MQ=255) cAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTg < 2:2300349/150‑1 (MQ=255) cAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTg > 1:3292863/1‑150 (MQ=255) gACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTg < 1:5064508/150‑1 (MQ=255) gtggAAGAGATCCCGATCACCGCACGGAGCGTCGTCACCTTTCGTCCATGGCAGAAGTTGAAGGCCCGGTTTGAGGCCTATGCTGGAACCAAGCCATAACGAAGAACTG‑CCCCCCATACAGGGCAAACGCT‑ACTTCACCATTGGTGAAGt < 1:1694968/148‑1 (MQ=255) ggggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGt < 2:2094106/150‑1 (MQ=255) gggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCAATGGTGAAGta < 1:4103528/150‑2 (MQ=255) gggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCAATGGTGAAGta < 1:3762661/150‑2 (MQ=255) agagATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCg > 1:3103651/1‑150 (MQ=255) gagaTCCCGATCACCGCACGGCGCGTCTTCACCTTTCGTACAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAATCGCTCACTTCACCAATGGTGAAGtagcgt < 2:154634/150‑6 (MQ=255) gagaTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGa < 2:4659579/150‑1 (MQ=255) agaTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAg < 1:5405388/150‑1 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGtt > 1:243434/1‑150 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGtt < 1:4398291/150‑1 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTtgt < 1:3959814/150‑1 (MQ=255) ccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTtgtg > 2:164308/1‑150 (MQ=255) gATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTtgtgtg > 1:3452021/1‑150 (MQ=255) cGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCACACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTaa < 2:3460862/150‑1 (MQ=255) gCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGATGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCGCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTaaa < 2:1360612/150‑1 (MQ=255) aCGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTACAGc > 2:4848505/1‑150 (MQ=255) cGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGcc < 2:4141024/150‑1 (MQ=255) gcgcGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCcac < 2:4221197/150‑1 (MQ=255) gcgcGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCcac < 2:2669051/150‑1 (MQ=255) gcgTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCacac > 2:1236585/1‑150 (MQ=255) gtcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGtgct > 1:4793389/1‑150 (MQ=255) aCCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCg > 2:3427264/1‑150 (MQ=255) tttCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTa > 1:2233339/1‑150 (MQ=255) tttCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTa > 2:3263034/1‑150 (MQ=255) gTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTgg < 1:2680661/150‑1 (MQ=255) gTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTgg < 1:4029349/150‑1 (MQ=255) tCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTggg > 1:4361967/1‑150 (MQ=255) gggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCa > 1:3686598/1‑150 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCa < 2:3670775/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg < 1:1820996/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg < 2:3878657/150‑1 (MQ=255) aGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAg > 2:31005/1‑150 (MQ=255) aGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTc < 1:4702948/150‑1 (MQ=255) gTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCg > 1:4537579/1‑150 (MQ=255) gTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCg > 1:3235872/1‑150 (MQ=255) tGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGAc < 2:378548/150‑1 (MQ=255) aaGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCa > 1:4611460/1‑150 (MQ=255) gCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCt < 1:5569217/150‑1 (MQ=255) ccGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTCTTGGGAGCAGGAGTTCGACCAGCTGa > 1:145731/1‑150 (MQ=255) ccGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGa > 1:2976431/1‑150 (MQ=255) ccGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGa > 1:1010789/1‑150 (MQ=255) ccGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGa > 2:11860/1‑150 (MQ=255) ccGGGTACAGCCCAATGCACGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGCCCAAACGCA‑ACAACACCAAAGCTCAACACACCCACATGTCAGCCGTAAAGCCACACGAGCTCCGCAATTCCGAGCAGCAGATCGACCACCtca > 2:456508/1‑148 (MQ=255) gTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGa > 1:3625586/1‑138 (MQ=255) gTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAAccc > 1:232440/1‑150 (MQ=255) ttGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCt < 1:3428624/150‑1 (MQ=255) tGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtg < 2:426859/150‑1 (MQ=255) gAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtgt < 2:3602109/150‑1 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGaa > 1:2456707/1‑150 (MQ=255) cTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgc > 1:1278261/1‑150 (MQ=255) tATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgcg > 2:1464721/1‑150 (MQ=255) cTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGcggcgg < 1:1363/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAATCGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTACTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg > 2:260667/1‑150 (MQ=255) tGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg < 1:730052/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg < 1:4843462/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGGATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg > 2:251345/1‑150 (MQ=255) aaCCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGa < 1:4278607/150‑1 (MQ=255) aCCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGaa > 2:214918/1‑150 (MQ=255) ccAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAc < 1:607544/150‑1 (MQ=255) ccAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAc > 1:5284176/1‑150 (MQ=255) cAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAcc > 2:764235/1‑150 (MQ=255) tAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTa > 1:1088369/1‑150 (MQ=255) aaCGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTAt > 2:284179/1‑150 (MQ=255) gacgaACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAg < 1:1518839/96‑1 (MQ=255) gacgaACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc < 2:3763358/150‑1 (MQ=255) gacgaACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc > 1:5472064/1‑150 (MQ=255) ccccATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGa < 2:853976/150‑1 (MQ=255) ccccATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGa > 2:4804720/1‑150 (MQ=255) ccccATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGa > 1:3912213/1‑150 (MQ=255) aTACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAtgtg < 2:1099103/150‑1 (MQ=255) tACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGc < 1:4955252/150‑1 (MQ=255) tACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGc < 1:632379/150‑1 (MQ=255) cGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga < 2:1984923/150‑1 (MQ=255) cGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga < 1:911249/150‑1 (MQ=255) gggCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGACGCGGCGGGGGAACCGGCGGTCTTACCAGCGCCAGGCTGTGCtgag > 2:4705943/1‑149 (MQ=255) gggCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtgat > 1:385910/1‑150 (MQ=255) gggCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtgat < 1:2791544/150‑1 (MQ=255) ggCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtgatg > 1:1960371/1‑150 (MQ=255) aaaCGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATc < 2:3125100/150‑1 (MQ=255) aaaCGCT‑AATTCACCATTGGTGAAGTGAGCGAGTTGTCTGCCGTAAAGCCACACGTGCTGCGGTCTTGGGAGCAGGAGGTCGACCAGCTGAAACCTGAGAAGCGGCGGGGGAACCGTCGGTATTACAAGCGACAGGATGTGCTGATGATc > 2:188674/1‑150 (MQ=255) tcGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCg > 2:5196107/2‑150 (MQ=255) cgctcaCTTCACCAATGGTGAAGT‑AGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGc > 2:593064/6‑150 (MQ=255) gCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGcc < 2:43346/150‑1 (MQ=255) ctcaCTTCACCAATGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGcc > 1:222230/4‑150 (MQ=255) ctcaCTTCACCAATGGTGAAGT‑AGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCa > 1:2052922/4‑150 (MQ=255) cT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCa < 1:5096123/150‑1 (MQ=255) t‑actacACCATTGGACAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTCAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAg > 2:2039214/1‑150 (MQ=255) ttCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGAtt > 1:2846615/1‑150 (MQ=255) ttCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGAtt > 1:2934124/1‑150 (MQ=255) tCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTc < 2:5401479/150‑1 (MQ=255) tCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTc < 2:2953804/150‑1 (MQ=255) tCACCAATGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTc > 1:2583077/1‑150 (MQ=255) cATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTgc > 2:1810131/1‑150 (MQ=255) cATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTgc < 1:3410321/150‑1 (MQ=255) | CCCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTG‑CCCCCCATACCGGGCAAACGCT‑ACTTCACCATTGGTGAAGTGAGCGAGTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGC > NC_002947/2821437‑2821735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |