| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,870,470 | G→T | 6.7% | intergenic (‑96/+36) | gllP ← / ← glllA | porin‑like protein/gallate dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,870,470 | 0 | G | T | 6.7% | 596.4 / 21.3 | 180 | intergenic (‑96/+36) | gllP/glllA | porin‑like protein/gallate dioxygenase |
| Reads supporting (aligned to +/- strand): ref base G (107/61); new base T (7/5); total (114/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
TGGCTGCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACC > NC_002947/2870323‑2870619 | tggctgCCTGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCCGGGTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 2:3672771/1‑150 (MQ=255)tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 1:3407649/1‑150 (MQ=255)tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 1:4494977/1‑150 (MQ=255)tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 2:1376248/1‑150 (MQ=255) gctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGAcg > 1:1120809/1‑150 (MQ=255) tGCGAATGTGGGGACGTGGGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCGCca < 1:3909203/150‑1 (MQ=255) gCGAATGTGGGGACTTGCGGGTACTGGGTGCGGAATTTCATTATTTTTATTCTCCAGGGATGGGCAAT‑GCGCTGCCGGCCCGGGGCGCTTCGGCGTTGGGCAGGTTTATTCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCGCcac < 1:2863082/150‑1 (MQ=255) aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg > 1:3854128/1‑150 (MQ=255) aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg > 1:1755479/1‑150 (MQ=255) tgtgGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGAt > 1:408954/1‑150 (MQ=255) ggACGAGGGGTTACTGGGTGGGGCATTTCATTATTTTTTTTCGCCCGGGATGGGCAAC‑GCGCGGCCCGCCAGGGGCGAATGGGGGCTGGGCTGTTTTAATCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGc < 2:3621115/150‑1 (MQ=255) ggACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGCGGCGGCGCGGGACGCGCCCTCACACGATAAAGc > 1:2485305/1‑150 (MQ=255) gACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCg > 1:4032524/1‑150 (MQ=255) gACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCg > 1:2298014/1‑150 (MQ=255) ccgcgggggTACGGGGGGCGGCATTTCTTTTTTTTTATTCCCCCGGTTTGGGAAAC‑GGGCGGCCCGCCCGGGGCGCTGCGGGGCGGGGCTGTTTGAAACCGGGGGGGGTGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCgg < 2:5018406/144‑1 (MQ=255) gcgggggTACGGGGTCGGTCTTTTCATTATTTTTATCCCCCGGGTATGGGAAAC‑GCGGGCCCCGCCAGGGGGGCATCGGCGCTGGGAAGTTTGATACAGGGGGGGGTGGGGGGGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGt < 2:5538654/146‑1 (MQ=255) gAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGt > 2:2949392/1‑150 (MQ=255) cgCGGGTACTGGGTGCGGATTTTCATTTTTTTTTTTCTCCCGGTTTGGGAAAA‑GCGCGGCCCGCCGGGGGCGATTGGGCGGTGGGATGTTTGAATCCGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGtt < 2:3372940/149‑1 (MQ=255) gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg > 1:5027750/1‑150 (MQ=255) gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg > 1:1450209/1‑150 (MQ=255) ggTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCAt > 1:4891178/1‑150 (MQ=255) gTACTGGGTGCGGCATTTAATTATTTTTTTTCCCCTGGGATGGGAAAT‑GCGCGGCCCGCCAGCGGCGCTGGGGCGCTGGGCTGTTTTAATCTGGGGGCGGTGGGGGGGGCGGGGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc < 2:3592828/150‑1 (MQ=255) gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc > 2:2758339/1‑150 (MQ=255) gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc > 2:4355911/1‑150 (MQ=255) tGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATAAAGCGGGTTGCATCGGTCAGtt > 1:4230675/1‑150 (MQ=255) ggaaTTTCTTTTTTTTTATGCTCCTGGTATGGGAAAA‑GCGCTGCCCGCCAGCGGCGCTTGGGCGCTGGGATGTTTTAATCTGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg < 2:3620683/147‑1 (MQ=255) ggCATTTCTTTATTTTTTGGCTCCCGGGTGGGCCAAC‑GCGGGGCCCGCCCGGGGCGAAGCGGGGGTGGGCTGGTTGAACCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg < 2:1296912/150‑1 (MQ=255) ggCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg > 1:1075110/1‑150 (MQ=255) aTTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGgcgc > 1:4777799/1‑150 (MQ=255) ttCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCtt > 2:3867613/1‑150 (MQ=255) tCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCttt > 2:5189257/1‑150 (MQ=255) ttttttttttTCCTCCGGGGTTGGGCAAC‑GGGGTGCCCGCCTGCGGGGCAGCGGGGGGGGGCTGGTGGAATCCGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgc < 2:3128749/146‑1 (MQ=255) attattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgc > 1:2947315/1‑150 (MQ=255) ttattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgag > 1:1383966/1‑148 (MQ=255) ttttttttttCTCC‑GGGTTGGGCAAACGGGGTCCCCGCCGGCGGCGATTGGGGGGGGGTCTTTTTTATTCTGGGGGGGGGGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca < 1:1957719/148‑1 (MQ=255) tattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca > 2:4735440/1‑150 (MQ=255) tattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca > 1:134807/1‑150 (MQ=255) tttttATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGGTGCATCGGTCAGTTGGGCGCTTTgccagc > 2:4987110/1‑150 (MQ=255) tttttATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGAACAAGCGGGGTGCATCGGTCAGTTGGGCGCTTTgcccgc > 1:607942/1‑150 (MQ=255) ctcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCCCCGAGt > 2:5298707/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:2170069/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:1758419/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:1844677/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 2:2324350/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:507521/1‑150 (MQ=255) ccAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAg > 1:3735449/1‑150 (MQ=255) cAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGc > 2:5526797/1‑150 (MQ=255) aGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCg > 1:3869984/1‑150 (MQ=255) gggCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctg > 1:5469068/1‑150 (MQ=255) gCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct > 1:4828136/1‑150 (MQ=255) gCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct > 2:5513361/1‑150 (MQ=255) cAAC‑GCGCGGCCGGCCCGCGGGGAATGGGCGGTGGGCTGGTTCAATCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 2:4317355/150‑1 (MQ=255) cAAC‑GCGCGGCCCGCCCGCGGCGCAGGGGCGCGGGGCTGGTTGAATCGGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 2:4428424/150‑1 (MQ=255) cAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg > 2:701319/1‑150 (MQ=255) aaaggcgcGGCCCGCCCGGGGCGCCGGGGGGGTGGGCTGTTTTAATGGGGGGGGGGGGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 1:2761145/146‑1 (MQ=255) aaa‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTgg > 1:1735322/1‑150 (MQ=255) cgggcggCCCGCCTGCGGGGCATCGGCGCGGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGtt < 2:4673801/144‑1 (MQ=255) ccgcgGCCCCCCCGCGGCGCAGGGGCGGGGGCCTGGTTGACCCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTa < 1:3163338/149‑1 (MQ=255) gcgctgcggcggTGGGCTGTTTGAATCTGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt < 2:3162771/144‑1 (MQ=255) gcgcATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt > 1:137009/1‑150 (MQ=255) gcgcATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt > 1:1677914/1‑150 (MQ=255) ccggggCGCTGGGCTGGTTCACGCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCt < 1:4804413/146‑1 (MQ=255) gggggggtGGGCTGGTTTATTCTGGGGGGGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCg < 2:225881/143‑1 (MQ=255) cGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGa > 2:2092734/1‑150 (MQ=255) gggggCTGGTTGATGCGGGGGGGGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGctc < 2:2154181/148‑1 (MQ=255) ccccggggggCGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCagg < 2:3221595/145‑3 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTGAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTGTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc > 2:2593671/1‑150 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc > 2:1261681/1‑150 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCCCGGGAAGCGCCGTCACAAGAACAAGCGGGTTGCATCGGACAGTTGGGCGCATTGCCAGCCACCGAGTAGCGAAACTTCTTGTTAAGGGTCTTAATTAAGTCCTCGAAGCTCTGCCCGCGCAAggc > 2:1622987/1‑150 (MQ=255) ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:2050754/148‑1 (MQ=255) ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 1:3800341/148‑1 (MQ=255) ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:1846264/148‑1 (MQ=255) ccgggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:510454/148‑1 (MQ=255) ggggggggggggggggggggCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc < 1:2274962/150‑1 (MQ=255) ggggggggggggggggGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc < 1:3577509/150‑1 (MQ=255) gggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCGGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCCTggcggc > 2:4422220/1‑150 (MQ=255) ggggggggggggGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg < 1:1064442/150‑1 (MQ=255) ggggggGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGTTCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg < 2:5392924/150‑1 (MQ=255) gggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGt > 2:356259/1‑150 (MQ=255) ggCGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTa < 2:3407649/150‑1 (MQ=255) ggTGGGGGGGGGGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGTCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAAt < 2:2411357/150‑1 (MQ=255) tGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGt > 2:1602617/1‑150 (MQ=255) gggggTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTc < 1:680414/150‑1 (MQ=255) gtgTGACGGCGCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCa > 1:4647690/3‑150 (MQ=255) ggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCTTAAATGTCCa < 1:3462344/150‑1 (MQ=255) ggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCa < 2:4105549/150‑1 (MQ=255) gggggcggcGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAg < 1:1572331/147‑1 (MQ=255) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct > 2:2920106/4‑87 (MQ=38) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt > 2:3706181/4‑150 (MQ=255) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTGCCTGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt > 2:22393/4‑150 (MQ=255) gcggcgCTGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg < 1:5371101/150‑1 (MQ=255) gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg > 2:4678764/1‑150 (MQ=255) gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg < 2:2151018/150‑1 (MQ=255) gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg < 1:813547/150‑1 (MQ=255) ggggcgGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCTCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTTCGGGTCTTCATGTAGTCCTCTATTCTCTGCCCGCGCATGGCTGCGTTAATGTCAAGGTTgta < 2:5618193/147‑3 (MQ=255) ggcgGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa < 1:3386277/150‑1 (MQ=255) ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa < 2:1120809/150‑1 (MQ=255) ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa < 2:2079194/150‑1 (MQ=255) ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa < 2:1450209/150‑1 (MQ=255) ggACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACAcc < 2:3551129/150‑1 (MQ=255) | TGGCTGCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACC > NC_002947/2870323‑2870619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |