| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,870,471 | G→C | 6.7% | intergenic (‑97/+35) | gllP ← / ← glllA | porin‑like protein/gallate dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,870,471 | 0 | G | C | 6.7% | 572.7 / 25.4 | 180 | intergenic (‑97/+35) | gllP/glllA | porin‑like protein/gallate dioxygenase |
| Reads supporting (aligned to +/- strand): ref base G (107/61); new base C (7/5); total (114/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.31e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
TGGCTGCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCC > NC_002947/2870323‑2870620 | tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 2:1376248/1‑150 (MQ=255)tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 1:3407649/1‑150 (MQ=255)tggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGa > 1:4494977/1‑150 (MQ=255) ggctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGAc > 1:4105549/1‑150 (MQ=255) gctgCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGAcg > 1:1120809/1‑150 (MQ=255) aGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCgc < 2:3511056/150‑2 (MQ=255) tGCGAATGTGGGGACGTGGGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCGCca < 1:3909203/150‑1 (MQ=255) gCGAATGTGGGGACTTGCGGGTACTGGGTGCGGAATTTCATTATTTTTATTCTCCAGGGATGGGCAAT‑GCGCTGCCGGCCCGGGGCGCTTCGGCGTTGGGCAGGTTTATTCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCGCcac < 1:2863082/150‑1 (MQ=255) aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg > 1:3854128/1‑150 (MQ=255) aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg > 1:1755479/1‑150 (MQ=255) tgGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCa > 1:4913834/1‑150 (MQ=255) ggACGAGGGGTTACTGGGTGGGGCATTTCATTATTTTTTTTCGCCCGGGATGGGCAAC‑GCGCGGCCCGCCAGGGGCGAATGGGGGCTGGGCTGTTTTAATCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGc < 2:3621115/150‑1 (MQ=255) ggACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGCGGCGGCGCGGGACGCGCCCTCACACGATAAAGc > 1:2485305/1‑150 (MQ=255) gACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCg > 1:4032524/1‑150 (MQ=255) ccgcgggggTACGGGGGGCGGCATTTCTTTTTTTTTATTCCCCCGGTTTGGGAAAC‑GGGCGGCCCGCCCGGGGCGCTGCGGGGCGGGGCTGTTTGAAACCGGGGGGGGTGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCgg < 2:5018406/144‑1 (MQ=255) gcgggggTACGGGGTCGGTCTTTTCATTATTTTTATCCCCCGGGTATGGGAAAC‑GCGGGCCCCGCCAGGGGGGCATCGGCGCTGGGAAGTTTGATACAGGGGGGGGTGGGGGGGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGt < 2:5538654/146‑1 (MQ=255) gAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGt > 1:3848640/1‑150 (MQ=255) cgCGGGTACTGGGTGCGGATTTTCATTTTTTTTTTTCTCCCGGTTTGGGAAAA‑GCGCGGCCCGCCGGGGGCGATTGGGCGGTGGGATGTTTGAATCCGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGtt < 2:3372940/149‑1 (MQ=255) gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg > 1:1450209/1‑150 (MQ=255) gTACTGGGTGCGGCATTTAATTATTTTTTTTCCCCTGGGATGGGAAAT‑GCGCGGCCCGCCAGCGGCGCTGGGGCGCTGGGCTGTTTTAATCTGGGGGCGGTGGGGGGGGCGGGGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc < 2:3592828/150‑1 (MQ=255) gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc > 2:2758339/1‑150 (MQ=255) gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc > 2:4355911/1‑150 (MQ=255) ggTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAg > 1:176887/1‑150 (MQ=255) gTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGCTCAAGCGGGTTGCCTCGGTCAGt > 2:2970097/1‑150 (MQ=255) ggaaTTTCTTTTTTTTTATGCTCCTGGTATGGGAAAA‑GCGCTGCCCGCCAGCGGCGCTTGGGCGCTGGGATGTTTTAATCTGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg < 2:3620683/147‑1 (MQ=255) ggCATTTCTTTATTTTTTGGCTCCCGGGTGGGCCAAC‑GCGGGGCCCGCCCGGGGCGAAGCGGGGGTGGGCTGGTTGAACCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg < 2:1296912/150‑1 (MQ=255) ggCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg > 1:1075110/1‑150 (MQ=255) aTTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGgcgc > 1:4777799/1‑150 (MQ=255) ttCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCtt > 2:3867613/1‑150 (MQ=255) tCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCttt > 2:5189257/1‑150 (MQ=255) attttttttttATTCCCCCGGG‑TGGGCAAACGGGCGGCCCGCCCGGGGGGCTGGGGGGGGGGGATGTTTTATTCTGGGGGGGGTGGGGGTGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCttt < 2:1383966/144‑1 (MQ=255) attattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGGGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgc > 1:4808212/1‑150 (MQ=255) attattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgc > 1:2947315/1‑150 (MQ=255) ttattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcc > 2:3671031/1‑150 (MQ=255) ttattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgag > 1:1383966/1‑148 (MQ=255) ttttttttttCTCC‑GGGTTGGGCAAACGGGGTCCCCGCCGGCGGCGATTGGGGGGGGGTCTTTTTTATTCTGGGGGGGGGGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca < 1:1957719/148‑1 (MQ=255) tattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca > 1:134807/1‑150 (MQ=255) tattTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca > 2:4735440/1‑150 (MQ=255) tttttATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGAACAAGCGGGGTGCATCGGTCAGTTGGGCGCTTTgcccgc > 1:607942/1‑150 (MQ=255) tATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCTGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCAcc > 2:2090758/1‑150 (MQ=255) ctcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCCCCGAGt > 2:5298707/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:2170069/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:4877174/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa > 1:1844677/1‑150 (MQ=255) tcCAGGGATGGGCAAA‑GCGCTGCCCGACAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCAAACCAACAAGCGGGTTGCATCGGTCATTTGGGCGCTTTTCCACCCACCGAgaa > 2:2362537/1‑148 (MQ=255) ccAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAg > 2:2931222/1‑150 (MQ=255) ccAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAg > 1:3735449/1‑150 (MQ=255) cAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGc > 2:5526797/1‑150 (MQ=255) aGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCg > 1:3869984/1‑150 (MQ=255) gggCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctg > 1:5469068/1‑150 (MQ=255) gCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct > 2:5513361/1‑150 (MQ=255) cAAC‑GCGCGGCCGGCCCGCGGGGAATGGGCGGTGGGCTGGTTCAATCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 2:4317355/150‑1 (MQ=255) cAAC‑GCGCGGCCCGCCCGCGGCGCAGGGGCGCGGGGCTGGTTGAATCGGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 2:4428424/150‑1 (MQ=255) cAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg > 2:701319/1‑150 (MQ=255) aaaggcgcGGCCCGCCCGGGGCGCCGGGGGGGTGGGCTGTTTTAATGGGGGGGGGGGGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg < 1:2761145/146‑1 (MQ=255) aaa‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTgg > 1:1735322/1‑150 (MQ=255) cgggcggCCCGCCTGCGGGGCATCGGCGCGGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGtt < 2:4673801/144‑1 (MQ=255) ccgcgGCCCCCCCGCGGCGCAGGGGCGGGGGCCTGGTTGACCCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTa < 1:3163338/149‑1 (MQ=255) gcggCCCCCCAGGGGCGCATGGGCGGGGGGCTGGTTTACGCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACg < 2:1044502/147‑1 (MQ=255) cggcgAATGGGCGGTGGGCTGTTTTAATCTGGGGGGGGTGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGaa < 1:4308696/150‑1 (MQ=255) gcgctgcggcggTGGGCTGTTTGAATCTGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt < 2:3162771/144‑1 (MQ=255) gcgcATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt > 1:1677914/1‑150 (MQ=255) gcgcATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt > 1:137009/1‑150 (MQ=255) gcgcATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCAACGGTCAGTTTGGCGCGTTGCCAGCCACCCAGTAGCGAACCAGCTGGTTACGGGTCTTCATGAAGt > 1:503908/1‑150 (MQ=255) gggggggtGGGCTGGTTTATTCTGGGGGGGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCg < 2:225881/143‑1 (MQ=255) gggggCTGGTTGATGCGGGGGGGGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGctc < 2:2154181/148‑1 (MQ=255) ttGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCCCCGTCACACCATCAAGCGGGTTGCCTCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCAGCTGGTTACGGGTCTTCATGAAGTCCTCGAAGCACATCCCgcgc > 1:670185/1‑150 (MQ=255) ccccggggggCGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCagg < 2:3221595/145‑3 (MQ=255) agcgggggggggTGGGGGGGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATgg < 1:2347517/146‑1 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTGAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTGTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc > 2:2593671/1‑150 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc > 2:1261681/1‑150 (MQ=255) tCAGGGGGCGGTGGGGGTGGCGGCCCGGGAAGCGCCGTCACAAGAACAAGCGGGTTGCATCGGACAGTTGGGCGCATTGCCAGCCACCGAGTAGCGAAACTTCTTGTTAAGGGTCTTAATTAAGTCCTCGAAGCTCTGCCCGCGCAAggc > 2:1622987/1‑150 (MQ=255) ggggggggggggggggggggggCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 1:3400979/148‑1 (MQ=255) ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:1846264/148‑1 (MQ=255) ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:2050754/148‑1 (MQ=255) ccgggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg < 2:510454/148‑1 (MQ=255) ggggggggggggggggggggCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc < 1:2274962/150‑1 (MQ=255) ggggggggggggggggGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc < 1:3577509/150‑1 (MQ=255) ggggggggggggggggGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc < 1:5218547/150‑1 (MQ=255) ggggggggggggGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg < 1:1064442/150‑1 (MQ=255) ggggggGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGTTCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg < 2:5392924/150‑1 (MQ=255) gggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGt > 2:356259/1‑150 (MQ=255) ggCGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTa < 2:3407649/150‑1 (MQ=255) gggggggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGTGTAAAt < 2:4381783/147‑1 (MQ=255) ggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCGTCGGTCAGTTGGGCGCTGTGCCAGCCACCGAGTAGCGAACCGGCTGGTTACGGGTCTGCATGAAGTCCTCGAGGCTCTGCCCGCGCATGGCGGCGTAAAt > 2:2293270/1‑150 (MQ=255) ggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAAt > 2:4896909/1‑150 (MQ=255) tGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGt > 2:1602574/1‑150 (MQ=255) gggggTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTc < 1:680517/150‑1 (MQ=255) gtgTGACGGCGCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCa > 1:4647690/3‑150 (MQ=255) ggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCTTAAATGTCCa < 1:3462344/150‑1 (MQ=255) ggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCa < 2:4105549/150‑1 (MQ=255) gggggcggcGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAg < 1:1572331/147‑1 (MQ=255) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct > 2:2920106/4‑87 (MQ=38) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt > 2:3706181/4‑150 (MQ=255) tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTGCCTGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt > 2:22393/4‑150 (MQ=255) gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg < 2:2151018/150‑1 (MQ=255) gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg > 2:4678764/1‑150 (MQ=255) ggggcgGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCTCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTTCGGGTCTTCATGTAGTCCTCTATTCTCTGCCCGCGCATGGCTGCGTTAATGTCAAGGTTgta < 2:5618193/147‑3 (MQ=255) ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa < 2:2078281/150‑1 (MQ=255) gACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAAGGTCCAACCTGGacatttac < 1:485230/150‑6 (MQ=255) | TGGCTGCCAGTGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAA‑GCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCC > NC_002947/2870323‑2870620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |