Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,870,480 T→C 5.5% intergenic (‑106/+26) gllP ← / ← glllA porin‑like protein/gallate dioxygenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,870,4800TC 5.5% 583.1 / 14.2 181intergenic (‑106/+26)gllP/glllAporin‑like protein/gallate dioxygenase
Reads supporting (aligned to +/- strand):  ref base T (102/69);  new base C (7/3);  total (109/72)
Fisher's exact test for biased strand distribution p-value = 7.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01

Only 100 of 182 total aligned reads displayed.

TGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTACGGCG  >  NC_002947/2870333‑2870629
                                                                                                                                                   |                                                                                                                                                     
tGCGAATGTGGGGACGTGGGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGACGGCGCGTCCCGCGCCGCca                                                                                                                                                     <  1:3909203/150‑1 (MQ=255)
    aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg                                                                                                                                                 >  1:3854128/1‑150 (MQ=255)
    aaTGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACg                                                                                                                                                 >  1:1566820/1‑150 (MQ=255)
      tgtgGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGAt                                                                                                                                               >  1:408954/1‑150 (MQ=255)
        tgGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCa                                                                                                                                             >  1:1364666/1‑150 (MQ=255)
           ggACGAGGGGTTACTGGGTGGGGCATTTCATTATTTTTTTTCGCCCGGGATGGGCAACGCGCGGCCCGCCAGGGGCGAATGGGGGCTGGGCTGTTTTAATCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGc                                                                                                                                          <  2:3621115/150‑1 (MQ=255)
           ggACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGCGGCGGCGCGGGACGCGCCCTCACACGATAAAGc                                                                                                                                          >  1:2485305/1‑150 (MQ=255)
            gACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCg                                                                                                                                         >  1:4032524/1‑150 (MQ=255)
            gACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCg                                                                                                                                         >  1:2298014/1‑150 (MQ=255)
             ccgcgggggTACGGGGGGCGGCATTTCTTTTTTTTTATTCCCCCGGTTTGGGAAACGGGCGGCCCGCCCGGGGCGCTGCGGGGCGGGGCTGTTTGAAACCGGGGGGGGTGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCgg                                                                                                                                        <  2:5018406/144‑1 (MQ=255)
               gcgggggTACGGGGTCGGTCTTTTCATTATTTTTATCCCCCGGGTATGGGAAACGCGGGCCCCGCCAGGGGGGCATCGGCGCTGGGAAGTTTGATACAGGGGGGGGTGGGGGGGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGt                                                                                                                                      <  2:5538654/146‑1 (MQ=255)
               gAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGt                                                                                                                                      >  1:2797806/1‑150 (MQ=255)
                cgCGGGTACTGGGTGCGGATTTTCATTTTTTTTTTTCTCCCGGTTTGGGAAAAGCGCGGCCCGCCGGGGGCGATTGGGCGGTGGGATGTTTGAATCCGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGtt                                                                                                                                     <  2:3372940/149‑1 (MQ=255)
                 gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAGGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg                                                                                                                                    >  1:3607746/1‑150 (MQ=255)
                 gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg                                                                                                                                    >  1:5027750/1‑150 (MQ=255)
                 gCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTg                                                                                                                                    >  1:1450209/1‑150 (MQ=255)
                    ggTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCAt                                                                                                                                 >  1:4891178/1‑150 (MQ=255)
                     gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc                                                                                                                                >  2:2758339/1‑150 (MQ=255)
                     gTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATc                                                                                                                                >  2:4355911/1‑150 (MQ=255)
                           ggTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAg                                                                                                                          >  1:176887/1‑150 (MQ=255)
                            gTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGCTCAAGCGGGTTGCCTCGGTCAGt                                                                                                                         >  2:2970097/1‑150 (MQ=255)
                             tGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGtt                                                                                                                        >  1:3131169/1‑150 (MQ=255)
                                ggCTTTTCTTTATTTTTTTCCTCCCGGTTGGGGCAACGGGGGGCCCGCCGGGGGCGCAGGGGCGCGGGGAAGTTGTAACCCGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg                                                                                                                     <  2:3620811/150‑1 (MQ=255)
                                ggCATTTCTTTATTTTTTGGCTCCCGGGTGGGCCAACGCGGGGCCCGCCCGGGGCGAAGCGGGGGTGGGCTGGTTGAACCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg                                                                                                                     <  2:1296912/150‑1 (MQ=255)
                                ggCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTggg                                                                                                                     >  1:1075110/1‑150 (MQ=255)
                                    tttCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCt                                                                                                                 >  2:2240476/1‑150 (MQ=255)
                                     ttCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCtt                                                                                                                >  2:3867613/1‑150 (MQ=255)
                                      tctttattTTTATTCTCCTGGGTTGGGCAACGCGCGGCCCGCCAGGGGCGCATCGGCGCTGGGCTGGTTGAATCTGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCttt                                                                                                               <  2:3579881/147‑1 (MQ=255)
                                      tCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCttt                                                                                                               >  2:5189257/1‑150 (MQ=255)
                                        attattTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGGGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgc                                                                                                             >  1:4808212/1‑150 (MQ=255)
                                          tattTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTgcca                                                                                                           >  1:134707/1‑150 (MQ=255)
                                                tATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCTGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCAcc                                                                                                     >  2:2090758/1‑150 (MQ=255)
                                                    ctcCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCCCCGAGt                                                                                                 >  2:5298707/1‑150 (MQ=255)
                                                     tcCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa                                                                                                >  1:507521/1‑150 (MQ=255)
                                                     tcCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTa                                                                                                >  1:1758419/1‑150 (MQ=255)
                                                     tcCAGGGATGGGCAAAGCGCTGCCCGACAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCAAACCAACAAGCGGGTTGCATCGGTCATTTGGGCGCTTTTCCACCCACCGAgaa                                                                                                >  2:2362537/1‑148 (MQ=255)
                                                      ccAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAg                                                                                               >  2:2931222/1‑150 (MQ=255)
                                                       cAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGc                                                                                              >  2:5526797/1‑150 (MQ=255)
                                                        aGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCg                                                                                             >  1:3869984/1‑150 (MQ=255)
                                                              gggCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctg                                                                                       >  1:5469068/1‑150 (MQ=255)
                                                               gccAACGCGCTCCCCGCCCGCGGCGCTGCGGCGGTGGGCCGTTTCAACCCGGGGGGGGGGGGGGTGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgc                                                                                      <  1:4713572/148‑1 (MQ=255)
                                                                gCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct                                                                                     >  2:5513361/1‑150 (MQ=255)
                                                                 cAACGCGCGGCCGGCCCGCGGGGAATGGGCGGTGGGCTGGTTCAATCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg                                                                                    <  2:4317355/150‑1 (MQ=255)
                                                                 cAACGCGCGGCCCGCCCGCGGCGCAGGGGCGCGGGGCTGGTTGAATCGGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg                                                                                    <  2:4428424/150‑1 (MQ=255)
                                                                 cAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg                                                                                    >  2:701319/1‑150 (MQ=255)
                                                                 aaaggcgcGGCCCGCCCGGGGCGCCGGGGGGGTGGGCTGTTTTAATGGGGGGGGGGGGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgctg                                                                                    <  1:2761145/146‑1 (MQ=255)
                                                                  aaaGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTgg                                                                                   >  1:1735322/1‑150 (MQ=255)
                                                                    cgggcggCCCGCCTGCGGGGCATCGGCGCGGGGCTGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGtt                                                                                 <  2:4673801/144‑1 (MQ=255)
                                                                       gcggCCCCCCAGGGGCGCATGGGCGGGGGGCTGGTTTACGCTGGGGGGGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACg                                                                              <  2:1044502/147‑1 (MQ=255)
                                                                                   cggcgAATGGGCGGTGGGCTGTTTTAATCTGGGGGGGGTGGGGGTGGGGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGaa                                                                  <  1:4308696/150‑1 (MQ=255)
                                                                                     gcgctgcggcggTGGGCTGTTTGAATCTGGGGGCGGGGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGt                                                                <  2:3162771/144‑1 (MQ=255)
                                                                                        ccggggCGCTGGGCTGGTTCACGCGGGGGGGGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCt                                                             <  1:4804413/146‑1 (MQ=255)
                                                                                                gggggCTGGTTGATGCGGGGGGGGGTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGctc                                                     <  2:2154181/148‑1 (MQ=255)
                                                                                                   ggCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACCATCAAGCGGGTTTCATCGGTCAGTTGGGCGCTTTTCCAGCCACCCAGTAGCGAAACTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGc                                                  >  1:1380338/1‑150 (MQ=255)
                                                                                                         ttGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCCCCGTCACACCATCAAGCGGGTTGCCTCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCAGCTGGTTACGGGTCTTCATGAAGTCCTCGAAGCACATCCCgcgc                                            >  1:670185/1‑150 (MQ=255)
                                                                                                            ccccggggggCGGGGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCagg                                         <  2:3221595/145‑3 (MQ=255)
                                                                                                            aagctggggggggTGGGGGGGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATg                                         <  2:2870268/145‑1 (MQ=255)
                                                                                                              tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTGAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTGTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc                                       >  2:2593671/1‑150 (MQ=255)
                                                                                                              tCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggc                                       >  2:1261681/1‑150 (MQ=255)
                                                                                                              tCAGGGGGCGGTGGGGGTGGCGGCCCGGGAAGCGCCGTCACAAGAACAAGCGGGTTGCATCGGACAGTTGGGCGCATTGCCAGCCACCGAGTAGCGAAACTTCTTGTTAAGGGTCTTAATTAAGTCCTCGAAGCTCTGCCCGCGCAAggc                                       >  2:1622987/1‑150 (MQ=255)
                                                                                                               ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg                                      <  2:1846264/148‑1 (MQ=255)
                                                                                                               ctggggggggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg                                      <  1:3800341/148‑1 (MQ=255)
                                                                                                               ccgggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcg                                      <  2:510454/148‑1 (MQ=255)
                                                                                                                 ggggggggggggggggggggCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc                                    <  1:2274962/150‑1 (MQ=255)
                                                                                                                 ggggggggggggggggGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc                                    <  1:3577509/150‑1 (MQ=255)
                                                                                                                 ggggcCGGGGGGGGTGCCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc                                    <  1:3421213/150‑1 (MQ=255)
                                                                                                                  ggggggggggggGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg                                   <  1:1064442/150‑1 (MQ=255)
                                                                                                                  ggggggGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGTTCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg                                   <  2:5392924/150‑1 (MQ=255)
                                                                                                                  ggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTTCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg                                   >  1:1977994/1‑150 (MQ=255)
                                                                                                                  ggggCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGgcggcg                                   >  2:1375171/1‑150 (MQ=255)
                                                                                                                       gggggggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGTGTAAAt                              <  2:4381783/147‑1 (MQ=255)
                                                                                                                       ggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCGTCGGTCAGTTGGGCGCTGTGCCAGCCACCGAGTAGCGAACCGGCTGGTTACGGGTCTGCATGAAGTCCTCGAGGCTCTGCCCGCGCATGGCGGCGTAAAt                              >  2:2293270/1‑150 (MQ=255)
                                                                                                                       ggTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAAt                              >  2:4896909/1‑150 (MQ=255)
                                                                                                                        gTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATg                             >  2:3602895/1‑150 (MQ=255)
                                                                                                                         tGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGt                            >  2:1602574/1‑150 (MQ=255)
                                                                                                                          gggggTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTc                           <  1:680517/150‑1 (MQ=255)
                                                                                                                            ggggggCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCa                         <  2:4105549/150‑1 (MQ=255)
                                                                                                                             ggTGGCGGCGGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAg                        <  1:1572348/150‑1 (MQ=255)
                                                                                                                               tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACctgct                                                                                     <  1:2920106/84‑1 (MQ=38)
                                                                                                                               tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt                      >  2:3706181/4‑150 (MQ=255)
                                                                                                                               tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt                      >  2:3272263/4‑150 (MQ=255)
                                                                                                                               tgacggcgCGTCCCGCGCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTGCCTGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGt                      >  2:22393/4‑150 (MQ=255)
                                                                                                                                 gcggcgCTGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg                    <  1:5371101/150‑1 (MQ=255)
                                                                                                                                 gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg                    >  2:4678764/1‑150 (MQ=255)
                                                                                                                                 gcggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTg                    <  2:2151018/150‑1 (MQ=255)
                                                                                                                                 acggcgCGTCCCGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc                                    <  2:1949562/133‑1 (MQ=255)
                                                                                                                                 acggcgCGTCCCGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATggcggc                                    >  1:1949562/2‑134 (MQ=255)
                                                                                                                                   ggggcgGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCTCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTTCGGGTCTTCATGTAGTCCTCTATTCTCTGCCCGCGCATGGCTGCGTTAATGTCAAGGTTgta                  <  2:5618193/147‑3 (MQ=255)
                                                                                                                                   ggcgGGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa                  <  1:3386277/150‑1 (MQ=255)
                                                                                                                                   ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa                  <  2:1450209/150‑1 (MQ=255)
                                                                                                                                   ggcgCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGa                  <  2:2078281/150‑1 (MQ=255)
                                                                                                                                         ggACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACAcc            <  2:3551129/150‑1 (MQ=255)
                                                                                                                                          gACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAAGGTCCAACCTGGacatttac           <  1:485230/150‑6 (MQ=255)
                                                                                                                                           ccgcgCCGCCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCa          >  1:2197085/2‑150 (MQ=255)
                                                                                                                                              cgcCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTa       <  1:1747588/150‑1 (MQ=255)
                                                                                                                                              cgcCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTa       <  1:1720983/150‑1 (MQ=255)
                                                                                                                                               gcCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTAc      >  2:4935124/1‑150 (MQ=255)
                                                                                                                                                ccGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTACg     <  1:3001195/150‑1 (MQ=255)
                                                                                                                                                ccGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTACg     <  1:4598206/150‑1 (MQ=255)
                                                                                                                                                  gTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTACGgc   >  1:3474519/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TGCGAATGTGGGGACGAGCGGGTACAGGGTGCGGCATTTCATTATTTTTATTCTCCAGGGATGGGCAAAGCGCTGCCCGCCAGCGGCGCATCGGCGCTGGGCAGGTTGAATCAGGGGGCGGTGGGGGTGGCGGCGCGGGACGCGCCGTCACACGATCAAGCGGGTTGCATCGGTCAGTTGGGCGCTTTGCCAGCCACCGAGTAGCGAACCTGCTGGTTACGGGTCTTCATGAAGTCCTCGATGCTCTGCCCGCGCATGGCGGCGTAAATGTCCAGGTTGGACACACCCAGTACGGCG  >  NC_002947/2870333‑2870629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑