| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,136,493 | T→A | 5.0% | L127Q (CTG→CAG) | PP_2748 → | ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,136,493 | 0 | T | A | 5.0% | 884.1 / 22.2 | 260 | L127Q (CTG→CAG) | PP_2748 | ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (119/125); new base A (8/5); total (130/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
GTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGCGTGCGC > NC_002947/3136344‑3136642 | gTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCt > 1:2154943/1‑150 (MQ=255) ccggccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGcat > 1:3567264/1‑148 (MQ=255) ccggccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCt < 1:4543250/150‑1 (MQ=255) ccagccgcgccgcCTGCAGCGGGTGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCt > 2:1413236/4‑150 (MQ=255) ggccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCAGGGCCTgt < 2:1792652/150‑2 (MQ=255) gccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGcc < 2:3664880/150‑1 (MQ=255) gccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCAGGGCCTgtt < 1:3045108/150‑3 (MQ=255) gccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCATAGGccaggc > 1:1001686/1‑146 (MQ=255) cgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCAc < 2:4952770/150‑1 (MQ=255) cACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGt < 1:692131/150‑1 (MQ=255) aCCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTg > 2:2882189/1‑150 (MQ=255) aCCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTg > 1:1079991/1‑150 (MQ=255) aCCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTg < 2:2221240/150‑1 (MQ=255) gCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGgcg < 2:5414172/150‑1 (MQ=255) cAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGgcgc > 1:5072006/1‑150 (MQ=255) cAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGgcgc < 2:3267307/150‑1 (MQ=255) cAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGgcgc < 1:2617429/150‑1 (MQ=255) gcggcTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGGTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCg > 1:440843/1‑150 (MQ=255) ggggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCttt < 1:4018125/150‑1 (MQ=255) ggggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCttt < 1:630294/150‑1 (MQ=255) gggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCtttt < 1:575742/150‑1 (MQ=255) gggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCtttt < 1:389661/150‑1 (MQ=255) ggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTg < 2:2578647/150‑1 (MQ=255) aTCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGcc < 1:3885712/150‑1 (MQ=255) cGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGa < 2:5592087/150‑1 (MQ=255) cGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGa < 2:1043016/150‑1 (MQ=255) cTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGa > 2:4634013/1‑150 (MQ=255) ttCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAg > 1:3219514/1‑150 (MQ=255) ttCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAg > 2:96221/1‑150 (MQ=255) ttCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAg > 2:2948797/1‑150 (MQ=255) tCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGc > 2:4725848/1‑150 (MQ=255) tCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGc > 2:2641053/1‑150 (MQ=255) cAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAg > 1:5250799/1‑150 (MQ=255) aGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGGGTTTCCAGCGGAGTTACTTTCTCGAACAGGCGGTGGGCCTGCGACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAgg > 2:4391885/1‑150 (MQ=255) aGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAgg > 2:1973258/1‑150 (MQ=255) gAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGt > 1:462739/1‑150 (MQ=255) aaCAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCAGGGCCTgttc > 1:4985125/1‑99 (MQ=255) aaTGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTg < 1:1852188/150‑1 (MQ=255) cTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTc > 1:1059176/1‑150 (MQ=255) gTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCt < 2:5290656/150‑1 (MQ=255) gTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCt > 2:5157096/1‑150 (MQ=255) aagaagATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAg < 1:3466145/150‑1 (MQ=255) aagaagATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTGTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAg < 2:5181705/150‑1 (MQ=255) agaagaTGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGc > 1:1189154/1‑150 (MQ=255) agaTGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGc < 1:3352238/150‑1 (MQ=255) gtgtGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCt > 2:4543353/1‑150 (MQ=255) tgCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgc > 1:4589847/1‑150 (MQ=255) tgCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgc < 1:2268547/150‑1 (MQ=255) gCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgcg > 2:2644287/1‑150 (MQ=255) cTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgcgc > 2:3794103/1‑150 (MQ=255) tGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGcgcg > 1:3769555/1‑150 (MQ=255) tGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGcgcg > 1:3485484/1‑150 (MQ=255) gACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGAt > 2:3118763/1‑150 (MQ=255) gACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGAt > 2:468400/1‑150 (MQ=255) aaCCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGtt > 1:5304772/1‑150 (MQ=255) aaCCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGATACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGtt > 1:1400224/1‑150 (MQ=255) ccTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGc > 1:2280829/1‑150 (MQ=255) cTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGcc < 1:2174159/150‑1 (MQ=255) cTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGcc < 1:198146/150‑1 (MQ=255) gCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGccc < 1:4899246/80‑1 (MQ=255) gCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGt < 2:3687796/150‑1 (MQ=255) cTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTg < 2:1893882/150‑1 (MQ=255) tCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTgg < 1:1026094/150‑1 (MQ=255) tCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTgg < 2:1262549/150‑1 (MQ=255) tCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTgg > 1:3682595/1‑150 (MQ=255) cACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTggg < 2:785188/150‑1 (MQ=255) aCCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGc > 2:678292/1‑150 (MQ=255) aCCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGc > 1:734116/1‑150 (MQ=255) ggTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGc < 2:5525805/150‑1 (MQ=255) tCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGTTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGcc > 1:2305595/1‑150 (MQ=255) tCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGcc > 2:576754/1‑150 (MQ=255) tCGCGATTACAGCGCAGTTACTTTCTCGAACAGCCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCGTTTGCCGAGCGCGCCGAGCAGGTGCTGCCGGTCCTCCAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGcc > 2:4034080/1‑150 (MQ=255) cgTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTAt < 1:1709487/150‑1 (MQ=255) gTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATg < 2:3965489/150‑1 (MQ=255) tCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGcc < 2:3974877/150‑1 (MQ=255) ccAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCt < 1:1772123/150‑1 (MQ=255) gcAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGa > 2:1626173/1‑150 (MQ=255) aGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGaaa < 1:5136071/150‑1 (MQ=255) gTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAAc < 1:1388949/150‑1 (MQ=255) gTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAAc < 2:435892/150‑1 (MQ=255) tACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAAcgc < 1:1516191/150‑1 (MQ=255) tACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAAcgc < 1:877655/150‑1 (MQ=255) tttCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGtt > 1:5498329/1‑150 (MQ=255) tttCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGtt > 2:3438234/1‑150 (MQ=255) tttCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCCAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGtt > 1:426242/1‑150 (MQ=255) tcGAACAGGCCCCGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGc > 2:5367304/1‑150 (MQ=255) gtggcAGGCCCAGGGCCTGTCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGcg > 2:2324304/5‑149 (MQ=255) gtggcAGGCCCAGGGCCTGTCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCt > 1:279442/5‑150 (MQ=255) tggcAGGCCCAGGGCCTGTCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTACAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTg > 2:1676878/4‑150 (MQ=255) gAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTg > 1:2579062/1‑150 (MQ=255) gAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTg > 1:437805/1‑150 (MQ=255) gAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTg < 2:1119455/150‑1 (MQ=255) ggcAGGACCAGGGCCTCCCACGTGCCCGGCGCGAGGCCCGGGCTTTACCCGAGCGCGCCGAGCAGGTGCTGGCGGACCTCCAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCCGCCTGGCCTCTGGCCTGCAGAAACGCGTGGAGCTgg > 2:3213636/3‑150 (MQ=255) aaCAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAg < 2:2786336/83‑1 (MQ=255) aCAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTggg < 1:4652633/150‑1 (MQ=255) aGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGc > 2:3406210/1‑150 (MQ=255) aGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGc < 2:3941748/150‑1 (MQ=255) cccTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGCGTg < 1:1837455/150‑1 (MQ=255) tGGGCCTGCCCCGTGCCCGGCGCGAGGCCCGGTCTTTGGCGGATCGCGCCGAGCAGTTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGTGGCGTgcgc < 2:440843/150‑1 (MQ=255) tGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGCGTgcgc > 2:130083/1‑150 (MQ=255) | GTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGCCTATGGCCTGCAGAAACGCGTTGAGCTGGGGCGTGCGC > NC_002947/3136344‑3136642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |