| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 289,943 | C→A | 5.2% | intergenic (+26/‑140) | oprE → / → PP_0235 | outer‑membrane porin E/peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 289,943 | 0 | C | A | 5.2% | 1042.4 / 32.5 | 306 | intergenic (+26/‑140) | oprE/PP_0235 | outer‑membrane porin E/peroxidase |
| Reads supporting (aligned to +/- strand): ref base C (146/144); new base A (4/12); total (150/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
GGAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289794‑290091 | aGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGa > 2:3355779/1‑150 (MQ=255) aGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGa < 1:1969181/150‑1 (MQ=255) gCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATg > 2:750993/1‑150 (MQ=255) gCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATg > 1:1505062/1‑150 (MQ=255) ctctCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGa < 1:935918/150‑1 (MQ=255) ctctCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGa < 2:1357838/150‑1 (MQ=255) tcAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGGc < 1:4344358/150‑1 (MQ=255) tcAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGGc < 1:2860064/150‑1 (MQ=255) aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCtt > 1:2231389/1‑150 (MQ=255) aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGGCtt < 2:2331262/150‑1 (MQ=255) ggCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCttttt < 1:83751/150‑1 (MQ=255) gCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGGCttcttt < 2:1690121/150‑1 (MQ=255) cTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTtgt < 1:1668452/150‑1 (MQ=255) gggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGc < 2:224922/150‑1 (MQ=255) gggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAAAAGCCTCGCATCAGGCGAGGCttctttttca < 2:1919333/150‑5 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGcc > 2:2640348/1‑150 (MQ=255) tCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCa < 1:2463430/150‑1 (MQ=255) gCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTtat < 2:2944207/150‑1 (MQ=255) cAAGGTGTATACCGTGGTAGCGGCGAAAGCGAACTGGACAAAGACCAGACTCGCTTCATAGTGAACTACACTTACAACTTCCAGTAAGACGTAGCTGAAAAAGAAGAATCCACTGATCCGAGGCTTTTTTGTGCCTGCAGATTTATATGt > 2:2212975/1‑150 (MQ=255) aGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAt < 2:4263325/150‑1 (MQ=255) ggTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAtt < 1:2330513/150‑1 (MQ=255) ggTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAtt > 2:3010028/1‑150 (MQ=255) gtgtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTGCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAttt > 2:4140652/1‑150 (MQ=255) tgtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTAtttt < 1:1648857/150‑1 (MQ=255) gtCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTg < 1:5561661/150‑1 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTGATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGtt > 2:5381436/1‑150 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGtt > 2:3096940/1‑150 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGtt > 1:3142646/1‑150 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGtt > 1:4157064/1‑150 (MQ=255) ccGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTtat > 2:3173696/1‑150 (MQ=255) tGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataaa < 2:2721513/150‑1 (MQ=255) cggcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAAtt < 2:967505/150‑1 (MQ=255) ggcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTg > 2:1001699/1‑150 (MQ=255) gcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGt > 1:492212/1‑150 (MQ=255) gcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGt > 1:640040/1‑150 (MQ=255) cgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtt < 1:4496349/150‑1 (MQ=255) aaaGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGttat < 1:5022617/150‑1 (MQ=255) gcCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTtatttatt < 2:4750042/150‑1 (MQ=255) ccTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCt > 2:2067326/1‑150 (MQ=255) cTGGACAAAGTCCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCGTGCAGATTTATATGTTTTTTGGTTATAAATAAATTGTTATTTATTCtt > 2:3277119/1‑150 (MQ=255) cTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCtt < 1:2130199/150‑1 (MQ=255) aaaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtt > 2:5134868/1‑150 (MQ=255) aaaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtt > 1:2170624/1‑150 (MQ=255) aaaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtt > 1:2366027/1‑150 (MQ=255) aaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGttt < 1:5121601/150‑1 (MQ=255) aaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGttt > 1:3714487/1‑150 (MQ=255) aGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtttt < 2:5563224/150‑1 (MQ=255) gACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGttttt > 1:1095649/1‑150 (MQ=255) ccAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTaa < 1:4772923/150‑1 (MQ=255) cAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAAt > 1:4227434/1‑150 (MQ=255) aCTCGCTTCATCGTGAACGACACTTACAACGTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGa < 2:3480981/150‑1 (MQ=255) cTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGGCTGCAGTTTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTGTTTTTGTTTTTTATCGAt > 2:4429423/1‑150 (MQ=255) gCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAACAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGc < 1:2989491/150‑1 (MQ=255) cTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 1:404702/150‑1 (MQ=255) aTCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGca < 2:83365/150‑1 (MQ=255) cGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGcaca > 1:3999903/1‑150 (MQ=255) gTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACAt > 1:119653/1‑150 (MQ=255) tGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACAtt < 2:5192632/150‑1 (MQ=255) aaCTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAATCCTCGCCTGATGCGAGGCTTTTTTGTGACTGAAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATAGAAGGCACATAGa > 2:4082593/1‑150 (MQ=255) aCTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGaa < 2:142566/150‑1 (MQ=255) aCTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGaa < 2:1167036/150‑1 (MQ=255) tACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAcc > 1:1367154/1‑150 (MQ=255) cacTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCa > 1:4406624/1‑150 (MQ=255) acTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCAt < 1:3294891/150‑1 (MQ=255) acTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCAt < 1:610744/150‑1 (MQ=255) cTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa > 2:390479/1‑150 (MQ=255) cTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATa < 2:897596/150‑1 (MQ=255) cTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGAGTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAAGCGATTGCAGGCACATTGAACCCATa > 2:5512522/1‑150 (MQ=255) ttACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTGTATGTCTTGTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATAc > 2:3676287/1‑150 (MQ=255) ttACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATAc > 1:341808/1‑150 (MQ=255) ttACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGAGTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGATCCCATAc > 2:3347157/1‑150 (MQ=255) tACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACg < 2:2430751/150‑1 (MQ=255) aCAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACgg > 1:3192369/1‑150 (MQ=255) cAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGt < 1:1391519/150‑1 (MQ=255) aaCTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTa < 2:5061380/150‑1 (MQ=255) cTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACa > 1:2236258/1‑150 (MQ=255) ttCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAg > 2:2858920/1‑150 (MQ=255) ccTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGaa < 1:4722292/150‑1 (MQ=255) cTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAc < 2:1505062/150‑1 (MQ=255) tGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc < 2:3820729/150‑1 (MQ=255) tGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcc < 1:2545262/150‑1 (MQ=255) gTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAccc > 2:4680690/1‑150 (MQ=255) tAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAccca > 1:1746697/1‑150 (MQ=255) tAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAccca < 1:3355729/150‑1 (MQ=255) tAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAccca > 1:4581854/1‑150 (MQ=255) gTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccagcccag < 1:2035109/150‑1 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc > 2:1025464/1‑150 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc > 1:1001009/1‑150 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATAGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc > 2:675653/1‑150 (MQ=255) gAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCg > 1:5266957/1‑150 (MQ=255) aaaaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGc > 1:922316/1‑150 (MQ=255) aaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAg < 1:2737241/150‑1 (MQ=255) aaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAg > 2:3981199/1‑150 (MQ=255) aaaGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAg > 1:90702/1‑150 (MQ=255) agaagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCCGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGcc < 2:4823322/150‑1 (MQ=255) aagCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGAGTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCa < 2:3767113/150‑1 (MQ=255) ccTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGACCCCAGCCCAGGAGCCGCAGCCCATGa > 2:592764/1‑150 (MQ=255) tCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGc > 1:2896091/1‑150 (MQ=255) gCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCt < 2:4304036/150‑1 (MQ=255) gCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGGATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCGGGAGCCGCAGCCCATGAGCCt > 2:862220/1‑150 (MQ=255) | GGAAGGCACTCTCAAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGGCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289794‑290091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |