| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,403,895 | C→G | 5.3% | intergenic (+123/‑119) | aroQ‑III → / → PP_3004 | type II 3‑dehydroquinate dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,403,895 | 0 | C | G | 5.3% | 709.0 / 21.7 | 208 | intergenic (+123/‑119) | aroQ‑III/PP_3004 | type II 3‑dehydroquinate dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (83/114); new base G (6/5); total (89/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 209 total aligned reads displayed.
GCGTGCGGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTCAACAAG > NC_002947/3403748‑3404044 | gcgtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCat > 2:933977/1‑150 (MQ=255) cgtgcgGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGTATCTCCGATCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCTGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatg < 2:375296/150‑1 (MQ=255) gcggcgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatggat < 1:1642173/150‑1 (MQ=255) gcggcgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCatggat > 1:2496202/1‑150 (MQ=255) cgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGaa > 1:3324759/1‑150 (MQ=255) cgATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGaa < 1:738442/150‑1 (MQ=255) aTGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggtag < 1:3427618/150‑5 (MQ=255) aGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCa < 2:5187177/150‑1 (MQ=255) gCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGGGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAg > 2:1930894/1‑150 (MQ=255) gCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAg > 1:5009093/1‑150 (MQ=255) cATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGt < 1:1567486/150‑1 (MQ=255) tCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGa < 2:1372792/150‑1 (MQ=255) tGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACt > 2:3473185/1‑150 (MQ=255) gAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACtt < 1:5605632/150‑1 (MQ=255) gCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAACTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTcc < 2:1673422/150‑1 (MQ=255) aGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGt < 2:1889638/150‑1 (MQ=255) gcAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTg > 1:4480215/1‑150 (MQ=255) aGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGct > 1:5474215/1‑149 (MQ=255) aGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCa > 2:3169797/1‑150 (MQ=255) aGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCa > 1:1849325/1‑150 (MQ=255) gggTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATa < 1:1736820/150‑1 (MQ=255) ggATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACg > 2:1824242/1‑150 (MQ=255) gATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACgg < 1:5583023/150‑1 (MQ=255) gATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACgg < 1:3879245/150‑1 (MQ=255) gATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACgg < 1:2331974/150‑1 (MQ=255) gATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACgg < 1:1062105/150‑1 (MQ=255) aTCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGt > 1:2970315/1‑150 (MQ=255) tctcCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTc < 1:2554389/150‑1 (MQ=255) tcCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCg < 2:5131990/150‑1 (MQ=255) ccGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggt < 2:5124978/111‑3 (MQ=255) ccGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggt > 1:5124978/1‑109 (MQ=255) cGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGt < 2:5537842/129‑1 (MQ=255) gcgcGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTc < 2:2776528/150‑1 (MQ=255) gcgcGTCTACCCGCGAAGCAGCTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGAGGATGTCGAGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTc < 2:4759614/150‑1 (MQ=255) cgTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaac < 2:4993286/150‑1 (MQ=255) tCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaacaa < 2:4084152/150‑1 (MQ=255) tCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaacaa < 1:1982525/150‑1 (MQ=255) tCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTcaacaa < 1:2999118/150‑1 (MQ=255) tACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGc > 2:4828322/1‑150 (MQ=255) aCCCGCGACGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTCGGTGGGGTGGATGTCGTGCTGCCTACCCATCCCGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATCGTACGGTCCGCCTGCAACACGcc > 2:3436973/1‑150 (MQ=255) aCCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGc < 1:4322124/149‑1 (MQ=255) ccGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAc > 2:4245130/1‑150 (MQ=255) ccGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAc > 2:1174799/1‑150 (MQ=255) ccGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAc > 2:1027205/1‑150 (MQ=255) ccGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCAGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAc > 1:5305567/1‑150 (MQ=255) cgcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAcc > 2:3258758/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 2:4930101/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc > 2:1491498/1‑150 (MQ=255) gcgAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCAccc < 2:2684061/150‑1 (MQ=255) aaGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGt < 1:5030997/150‑1 (MQ=255) aaGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGt < 1:4443942/150‑1 (MQ=255) gCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTc < 1:5171427/150‑1 (MQ=255) aGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGt > 1:1068968/1‑150 (MQ=255) tGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGc < 2:227849/150‑1 (MQ=255) ggCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGcc < 2:4741141/150‑1 (MQ=255) cgcgGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGAATTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTc > 1:2673628/1‑150 (MQ=255) gcgGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggta < 1:207621/82‑4 (MQ=255) gcgGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCATGctggatgggta > 2:207621/1‑79 (MQ=255) ggggCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCaa < 1:2887862/150‑1 (MQ=255) gCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAAccc > 2:948094/1‑150 (MQ=255) gCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAAccc < 1:3034868/150‑1 (MQ=255) aTGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCa < 2:1553412/150‑1 (MQ=255) gcggcgACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACg < 2:3658402/150‑1 (MQ=255) gACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCg < 1:3258758/150‑1 (MQ=255) cGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCggg < 1:5527839/150‑1 (MQ=255) ggCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCgggg > 1:3442570/1‑150 (MQ=255) ggCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCgggg < 1:3905015/150‑1 (MQ=255) cgcCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGct > 2:3008807/1‑150 (MQ=255) cgcCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGct > 2:3825596/1‑150 (MQ=255) tGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCa < 1:1114653/150‑1 (MQ=255) tGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCa < 1:3527129/150‑1 (MQ=255) gAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCAt < 2:2183884/150‑1 (MQ=255) gAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCAt > 1:3798675/1‑150 (MQ=255) aGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGa < 1:3732432/150‑1 (MQ=255) gTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGAc < 2:847516/150‑1 (MQ=255) gACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCt < 1:4505053/150‑1 (MQ=255) aCCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTg < 2:3966037/150‑1 (MQ=255) ccGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTgg < 2:5289983/150‑1 (MQ=255) ccGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTgg < 2:5043910/150‑1 (MQ=255) gTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGa < 2:364685/150‑1 (MQ=255) aGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAgg < 2:1429873/150‑1 (MQ=255) gtgtGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTc > 1:721452/1‑150 (MQ=255) tgtgGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTACGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCg > 2:2500302/1‑150 (MQ=255) tggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATgg > 2:4337011/1‑150 (MQ=255) ggATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGa < 1:1655004/150‑1 (MQ=255) gATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGAc > 2:695353/1‑150 (MQ=255) cGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGc < 2:2970315/150‑1 (MQ=255) gTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCGGGGAGGTCGAATGGACGTCGCt > 2:3556129/1‑150 (MQ=255) ctgcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACa > 2:1201779/1‑150 (MQ=255) tgcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGAGCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACaa > 2:359314/1‑150 (MQ=255) ggctttccatccatGCTGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAAc > 1:2981033/7‑150 (MQ=255) gcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAAt < 1:4148685/135‑1 (MQ=255) gcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAAc > 2:1046161/1‑150 (MQ=255) gcCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACGGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAAt > 2:4148685/1‑135 (MQ=255) tttccatccatGCTGGATGGGAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 2:2317500/4‑150 (MQ=255) tACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGAt > 2:1301117/1‑150 (MQ=255) cccATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCa < 1:958572/150‑1 (MQ=255) aTCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTc > 2:644451/1‑150 (MQ=255) cAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTcaac > 2:4409590/1‑150 (MQ=255) cAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTcaac > 1:4666762/1‑150 (MQ=255) | GCGTGCGGCGATGAGCATGGTCTGAGCAGGGCGCAGGGGTCGGATCTCCGAGCGCGTCTACCCGCGAAGCAGGTGGCGCGGGGCATGCGGCGACGGCGCCTGAAGTGACCGTAGGTGTGGTGGATGTCGTGCTGCCTACCCATCCAGCATGGATGGAAAGCCAGTAGCGACTTCCGTGACTGCATAGTACGGTCCGCCTTCAACAAGCCACCCGGTTCGTTGCCTCCAACCCCACGGACCGGGGCTCTCATGACCTGGGAGGTCGAATGGACGTCGCTACAACGATCAGTCAACAAG > NC_002947/3403748‑3404044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |