| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,429,882 | C→G | 6.7% | intergenic (+478/‑34) | PP_3039 → / → PP_3040 | hypothetical protein/holin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,429,882 | 0 | C | G | 6.7% | 835.1 / 35.7 | 250 | intergenic (+478/‑34) | PP_3039/PP_3040 | hypothetical protein/holin |
| Reads supporting (aligned to +/- strand): ref base C (106/127); new base G (4/13); total (110/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
CATTCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGC > NC_002947/3429733‑3430029 | ttCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCt > 2:3782843/1‑150 (MQ=255) tCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTg > 1:5597569/1‑150 (MQ=255) aCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGgcg > 2:5218299/1‑150 (MQ=255) aCATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgg < 1:3000111/150‑1 (MQ=255) cagtCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCggg < 2:5525831/147‑1 (MQ=255) cATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCggg < 1:1607021/150‑1 (MQ=255) cATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCggg < 2:1923285/150‑1 (MQ=255) aTTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgggg < 2:1256233/150‑1 (MQ=255) ttCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGt < 1:1994865/150‑1 (MQ=255) tCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGtt < 2:2958857/150‑1 (MQ=255) ccccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttt < 1:1815317/150‑1 (MQ=255) ccccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttt < 1:1280163/150‑1 (MQ=255) cccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGtttt < 1:3302677/150‑1 (MQ=255) cccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGtttt > 2:3641833/1‑150 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt < 2:3372150/150‑1 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt > 2:1337808/1‑150 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt < 2:4005624/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 1:3077870/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:2635502/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 1:5218299/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg > 1:4265219/1‑150 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:5369457/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:4014953/150‑1 (MQ=255) tACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggg < 1:751191/150‑1 (MQ=255) aCCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgggg > 2:3083134/1‑150 (MQ=255) aCCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgggg < 1:148191/150‑1 (MQ=255) ccACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggggg < 1:376037/150‑1 (MQ=255) ccACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggggg > 2:2250794/1‑150 (MQ=255) cACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGa > 1:2751609/1‑150 (MQ=255) cTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGAtt > 1:1305293/1‑150 (MQ=255) aTTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGa < 2:2983780/150‑1 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt > 1:4166020/1‑150 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 1:4611307/150‑1 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt > 2:4963514/1‑150 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 2:656623/150‑1 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCCGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 1:812431/150‑1 (MQ=255) tGCCGTGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATg < 2:3209638/150‑1 (MQ=255) ccGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGaa < 1:1170009/150‑1 (MQ=255) cGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAAc < 2:5607831/150‑1 (MQ=255) gTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGc < 1:447371/150‑1 (MQ=255) gTGGCATAAAAACTCGCTTGCTGCCACCGGAATCCACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCCGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTATTGCCTTTGGGGGATTCGATGAACAGc < 1:2395128/150‑1 (MQ=255) ggCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGa < 2:1963472/150‑1 (MQ=255) gctttAATACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGGCTTTGGGGGATTCGATGAACAGCGag < 1:827313/147‑1 (MQ=255) aTTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCCAACACTGAAAACCCCGGCCCGGGCGCCGGGGGTTTTGCGTGTGGGGGATTCGATGAAAAGCGagca > 1:2878406/1‑150 (MQ=255) aTTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagca > 2:170038/1‑150 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGTGagcag > 2:4329759/1‑150 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagcag > 1:5459780/1‑150 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagcag < 2:5291063/150‑1 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagcag < 1:2526333/150‑1 (MQ=255) aaaCTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCaa < 2:2692554/150‑1 (MQ=255) tCGCTTGCTGCCTCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGt < 2:2436168/150‑1 (MQ=255) gCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa > 2:3480368/1‑150 (MQ=255) gCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa < 2:324968/150‑1 (MQ=255) gCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa < 1:5035085/150‑1 (MQ=255) gCTTGCTGCCACAGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTTCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTTGCGCCGGGGTTTTTGCGTTTGGGGGATTCGATGAACAGCGAGAAGCAAGCGTTa > 2:253106/1‑150 (MQ=255) ttctgcCTCCGGAATCGACCTGTAAATAGTACCCCTCTTCGATACGTGCGGGCGCACAAAGCGGCCCGCAAAACACTGAAAACACCGGCCCTGGCGCCTGGTTTTTTGCCTTTGGTGGATTCGATTAACAGCGAGCAGCAAGCGTTAGtt < 2:1531368/148‑1 (MQ=255) gctgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTg < 1:4544845/150‑1 (MQ=255) gctgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTg > 2:3616457/1‑150 (MQ=255) aCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGc > 2:2359292/1‑150 (MQ=255) aCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGc < 1:4685256/150‑1 (MQ=255) ccGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGcc < 2:3753329/150‑1 (MQ=255) cGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCa > 2:977941/1‑150 (MQ=255) cGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtgg < 1:1024926/150‑1 (MQ=255) cGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtgg < 2:1009210/150‑1 (MQ=255) aCCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggtt < 2:2840446/150‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg > 1:4142646/1‑150 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCTAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt < 1:1728491/150‑1 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt > 1:365741/1‑150 (MQ=255) gTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGGTGAGATGCCAAGCTGGTTGGTg > 1:2258065/1‑150 (MQ=255) aaaaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGAt > 2:1880428/1‑150 (MQ=255) aaaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc > 2:1157512/1‑150 (MQ=255) tACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCt < 2:338936/150‑1 (MQ=255) tACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCt < 1:2371770/150‑1 (MQ=255) aCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTcggcg < 1:2662231/150‑1 (MQ=255) gTGCGGGCGCTCAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTccc < 1:4253299/139‑1 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTccc > 2:4253299/1‑139 (MQ=255) gTGCGGGCGCACAAAGCCGCCCGCCAACCACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCggg < 2:3879391/150‑1 (MQ=255) gCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGgt < 2:346386/150‑1 (MQ=255) ggCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTc > 2:4267266/1‑150 (MQ=255) cgcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAg < 2:5325465/150‑1 (MQ=255) cgcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAg < 2:465221/150‑1 (MQ=255) gcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGAGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGTTCGGAGGGGTGTCAgg > 1:3857587/1‑150 (MQ=255) acaAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCg > 2:4615316/1‑150 (MQ=255) aaGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGAGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCgaga < 2:5151031/150‑1 (MQ=255) cGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGAtgt < 1:4197777/150‑1 (MQ=255) cGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCgg > 2:5422365/1‑150 (MQ=255) cGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCgg < 2:4166085/150‑1 (MQ=255) aaCACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGa > 2:4391160/1‑150 (MQ=255) acTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACAt < 1:3991060/150‑1 (MQ=255) gcaaaaaCCCCGGCGCCAGGGCCGGGGTTTTCGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg > 1:5414075/4‑150 (MQ=255) tGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATgg > 2:1056382/1‑150 (MQ=255) aaaaCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGAGGCGGGCCGACATGGcc > 2:4536213/1‑150 (MQ=255) aCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGc < 1:5299492/150‑1 (MQ=255) cccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGt > 2:2141565/1‑150 (MQ=255) cccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGt > 1:649427/1‑150 (MQ=255) cGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTa > 1:5395357/1‑150 (MQ=255) cGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATATTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTa > 2:4579049/1‑150 (MQ=255) gCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg > 2:4885218/1‑82 (MQ=255) gCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg < 1:4885218/82‑1 (MQ=255) gCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGc < 2:3962767/150‑1 (MQ=255) | CATTCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGC > NC_002947/3429733‑3430029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |