| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,429,885 | G→A | 6.3% | intergenic (+481/‑31) | PP_3039 → / → PP_3040 | hypothetical protein/holin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,429,885 | 0 | G | A | 6.3% | 791.4 / 24.8 | 254 | intergenic (+481/‑31) | PP_3039/PP_3040 | hypothetical protein/holin |
| Reads supporting (aligned to +/- strand): ref base G (107/129); new base A (3/13); total (112/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.06e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
TCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGCGGCTG > NC_002947/3429736‑3430034 | aaCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGgc > 2:3573571/1‑150 (MQ=255) aCAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGgcg > 1:4601378/1‑150 (MQ=255) gACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCg < 2:1032903/150‑1 (MQ=255) gACATGCCCCGGACGTTGACCACTTATTGCCGGGTGGCATTAAAACTCGCTGGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCg < 2:2824025/150‑1 (MQ=255) aCATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgg < 1:3000111/150‑1 (MQ=255) cATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCggg < 2:1923285/150‑1 (MQ=255) cATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCggg < 1:1607021/150‑1 (MQ=255) cccccccGGACGTTGACCACGTATCGCCGCGTGGCATTACAACTCGCTTGCTGCCACCGGAATCGACCTGTAAACAGTACCCCTCTTCGAGACGTGCGGGCGCACAATGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgggg < 2:4982822/147‑1 (MQ=255) aTTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCgggg > 1:2410946/1‑150 (MQ=255) ttCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGt < 1:1994865/150‑1 (MQ=255) gtCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGt < 2:521405/149‑1 (MQ=255) tCCCCGGACGTTTACCACTTTTTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGtt < 2:5424871/150‑1 (MQ=255) tCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTACAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGtt < 2:2912404/150‑1 (MQ=255) tCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGtt < 2:4651823/150‑1 (MQ=255) ccccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttt < 1:1815317/150‑1 (MQ=255) ccccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttt < 1:1280163/150‑1 (MQ=255) cccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGtttt > 2:3641833/1‑150 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt > 2:1337808/1‑150 (MQ=255) ccGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGttttt < 1:692927/150‑1 (MQ=255) cGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttttca < 1:4155961/150‑3 (MQ=255) gACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCGGGCGCCGGGGTTTTTGcc > 1:3134901/1‑150 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:5353888/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:4014953/150‑1 (MQ=255) ttACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgg < 2:2635502/150‑1 (MQ=255) aCCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgggg < 1:148191/150‑1 (MQ=255) aCCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTgggg < 2:4265915/150‑1 (MQ=255) ccACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTggggg > 2:5244775/1‑150 (MQ=255) cACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGa > 1:2751609/1‑150 (MQ=255) cACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTGGGGGGa > 2:106995/1‑150 (MQ=255) cACTTAATGCCGGGGGGCATGAAAACTCGCGTGCTGCCACCGGCATCGACCGGGAAAACGAACCCATCGTCGAGACGTGCGGGCCCACAAAGCGGCCCGCCAAACACACAAAACCCCGGCCCTGGCGCCGCGGGTGTGGCCTATGGGGGa > 2:3222073/1‑150 (MQ=255) aCTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCGGGCGCCGGGGTTTTTGCCTTTGGGGGAt > 2:1166252/1‑150 (MQ=255) cTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGAtt > 1:1305293/1‑150 (MQ=255) aTTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCGGGCGCCGGGGTTTTTGCCGTTGGGGGATTCGa > 1:3952016/1‑150 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt < 2:656623/150‑1 (MQ=255) ttGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGAt > 1:4166085/1‑150 (MQ=255) ccGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGaa > 2:2181405/1‑150 (MQ=255) ccGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGaa < 1:1170009/150‑1 (MQ=255) cGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAAc < 2:5607831/150‑1 (MQ=255) gCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGag < 1:819181/150‑1 (MQ=255) gCATTAAAACCCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGag > 2:2371770/1‑150 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGTGagcag > 2:4329759/1‑150 (MQ=255) ttAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGagcag < 1:2526333/150‑1 (MQ=255) tCGCTTGCTGCCTCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGt < 2:2436168/150‑1 (MQ=255) tCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAATGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGt > 1:4445172/1‑150 (MQ=255) gCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa > 2:3480368/1‑150 (MQ=255) gCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTa < 1:2973398/150‑1 (MQ=255) ttGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGGTAGt > 2:1004716/1‑150 (MQ=255) tgcCACCGGAATCGACCTGTAAAAAGTACCCTTCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTgag < 2:4341094/150‑1 (MQ=255) tgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGtt < 2:3732660/101‑1 (MQ=39) tgcCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTgag > 2:3991060/1‑150 (MQ=255) ccACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCGCCAGGGCCGGGGttttca > 2:529446/1‑101 (MQ=38) ccACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt > 2:3173899/1‑150 (MQ=255) ccACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGAt < 2:1940846/150‑1 (MQ=255) cACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATg > 1:465221/1‑150 (MQ=255) aCCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGc > 1:5448462/1‑150 (MQ=255) cGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCa > 2:977941/1‑150 (MQ=255) gAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAAt < 1:5611523/150‑1 (MQ=255) gAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAAt > 2:2978692/1‑150 (MQ=255) cGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtgg < 1:1024926/150‑1 (MQ=255) ccTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttg < 2:5407883/150‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg < 1:4951856/150‑1 (MQ=255) cTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttgg < 2:4563458/150‑1 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCTAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt < 1:1728491/150‑1 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt < 1:4137297/150‑1 (MQ=255) tGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTGTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCtggttggt > 2:4817179/1‑150 (MQ=255) gTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTg < 1:2270651/150‑1 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGa > 1:787254/1‑150 (MQ=255) tAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGa > 1:5528059/1‑150 (MQ=255) aaaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc > 1:5355846/1‑150 (MQ=255) aaaaGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATc > 2:1733314/1‑150 (MQ=255) aGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTc > 2:4951097/1‑150 (MQ=255) tACCCATCTTCGAGACGTGCGGGCGCTCTAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCt < 2:1654090/150‑1 (MQ=255) tACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCt < 2:338936/150‑1 (MQ=255) tACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCt < 1:2371770/150‑1 (MQ=255) aTCTTCGAGACGAGCGGGCGCACAAAGCGGCACGCCAAAAACTGAAAACACCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTccc > 2:3371414/1‑150 (MQ=255) cTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGACCAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTg < 1:3824862/150‑1 (MQ=255) aCGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTcggcg < 1:2662254/150‑1 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTccc > 2:4253299/1‑139 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTccc < 1:4253306/139‑1 (MQ=255) gTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTGTGGGGGAGTCGATGAACCGCGAGCAGCAAGCGGTAGTGGAGATGCCCCGCGGGGGGGTGGTCGTCCTGTCCCGGGGCGGCggg > 1:3307775/1‑150 (MQ=255) gCGGGCGCACAAAGCGGCCCGCCAACCACTGAAAACCCCGGCCCGGGCGCCGGGGTTTTTGCCTTGGGGGGATTCGATGAACAGCGAGCAGCCAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGgt < 2:346316/150‑1 (MQ=255) gggCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGgtgt > 1:3675252/1‑150 (MQ=255) gcACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAgg > 1:4863408/1‑150 (MQ=255) aaaGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGCTTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCgag > 1:4245168/1‑150 (MQ=255) gCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTgg < 1:5161988/150‑1 (MQ=255) gCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTgg < 2:4534820/150‑1 (MQ=255) cGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCgg < 2:4166020/150‑1 (MQ=255) cGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCgg > 2:3793983/1‑150 (MQ=255) gcaaaaaCCCCGGCGCCAGGGCCGGGGTTTTCGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg > 1:5414075/4‑150 (MQ=255) gcaaaaaCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCGGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATg > 2:2997896/4‑150 (MQ=255) aaCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGTCCGACATGGCCgg > 2:1276050/1‑150 (MQ=255) aCCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGc < 1:5299492/150‑1 (MQ=255) cccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGt > 2:2141565/1‑150 (MQ=255) cccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGt > 2:5570692/1‑150 (MQ=255) ccGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGtt > 1:4478891/1‑150 (MQ=255) cGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTa < 2:4601378/150‑1 (MQ=255) gCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGc < 2:3962767/150‑1 (MQ=255) cTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGCGGc < 2:181752/150‑1 (MQ=255) tGGCGCCGGGGTTTTTGCCTTTGGGGGATTAGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGCGGCt > 2:256834/1‑150 (MQ=255) ggCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGCGGCTg < 2:2687503/150‑1 (MQ=255) | TCAACAGACATTCCCCGGACGTTTACCACTTATTGCCGGGTGGCATTAAAACTCGCTTGCTGCCACCGGAATCGACCTGTAAAAAGTACCCATCTTCGAGACGTGCGGGCGCACAAAGCGGCCCGCCAAACACTGAAAACCCCGGCCCTGGCGCCGGGGTTTTTGCCTTTGGGGGATTCGATGAACAGCGAGCAGCAAGCGTTAGTTGAGATGCCAATCTGGTTGGTGATCTTCCTGTCCCTGGTCGGCGGGGTGTCAGGCGAGATGTGGCGGGCCGACATGGCCGGCGTTAGCGGCTG > NC_002947/3429736‑3430034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |