| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,471,833 | T→G | 17.8% | intergenic (‑16/+108) | PP_3081 ← / ← PP_5560 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,471,833 | 0 | T | G | 17.8% | 374.3 / 24.6 | 190 | intergenic (‑16/+108) | PP_3081/PP_5560 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (29/115); new base G (32/5); total (70/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.08e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 196 total aligned reads displayed.
CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3471684‑3471982 | cgcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCt < 2:681030/150‑1 (MQ=255) cgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgc < 1:1824729/150‑1 (MQ=255) aCCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcggc > 2:2753598/1‑150 (MQ=255) ccTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcggcg < 1:4785138/150‑1 (MQ=255) cTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCcggcggcgg > 1:4493968/1‑150 (MQ=255) cTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGcggcgg < 1:4291067/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 2:1302380/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 1:1646629/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc > 2:3224629/1‑150 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCaa > 1:3756208/1‑150 (MQ=255) ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAAc < 2:3483660/150‑1 (MQ=255) ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAAc > 1:2331128/1‑150 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACg < 2:9254/150‑1 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCGGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaagg < 2:45768/150‑3 (MQ=255) aGGTTGTCCCAGCTCAGGTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCAGCAGTGAAAGACGAGGAACTGACCGCCATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCt < 2:4841759/150‑1 (MQ=255) gTTGTCCCAGCTCTGTTGCGGGGTCCGCTCTTCACCGGCACCGCTTGCCGGGTCCTGGCCGACCTGTTGCAGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCtgt < 2:5266588/150‑1 (MQ=255) gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCggt > 1:1356320/1‑150 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCCACCCGGTGCAg > 1:4572539/1‑150 (MQ=255) tCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg < 2:1225189/150‑1 (MQ=255) gcccAGCTCAGTTGGGGGGTCCGCTCTTCACCGGCACCGCATGCGGGGTCCGGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg < 1:3171185/149‑1 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGGCCACGCGGTGCAggg > 1:2053915/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCGGTGCAggg > 2:1610835/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAggg > 2:1612781/1‑150 (MQ=255) cAGCTCTGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACGTGTTGCTGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgc < 1:3622755/150‑1 (MQ=255) aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgca < 2:3707709/150‑1 (MQ=255) cTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACGCTGTGCAGGgccgc > 2:1889654/1‑150 (MQ=255) tCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTGGCCGGGCACTGACGCCGCCATCAGTGAACGCCGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgcagca < 2:1487250/150‑1 (MQ=255) aGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa < 1:4170910/150‑1 (MQ=255) gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaac > 2:3292371/1‑149 (MQ=255) gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAag > 2:5509065/1‑150 (MQ=255) tggggggTCCGCTCTTCCCCGGCCCCGCTTGCCGGGGCCGGGCCGACCTGTTGCCGGGCAATGACGCCGCCATCAGTGAAAGCCGCGGAACTGACCGACATCGCGCGTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagca < 1:5267948/147‑1 (MQ=255) gCGGGGTCCGCTCTTCACCGGCCCCGCTTGCCGGGTCGTGGCCGACCTGTTGCCGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGAAATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcag < 1:2710968/150‑1 (MQ=255) ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCg < 1:4991489/150‑1 (MQ=255) gggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCCGCAAAGCCGCGa > 1:2763222/1‑150 (MQ=255) gTCCGCTCTTCACCGGCACCGCATGCGGGGTCCTGGCCGACCTGTTGCTGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAAc < 2:159389/150‑1 (MQ=255) atctctctTCCCGGGCACCGCTTGCGGGGTCCTGGCCGACCTGTGGCTGGGAATTGACGCCGCCATCTGTTAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGGGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACa < 1:3078796/146‑1 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCACCGCGGGGCAGGGCAGCACACCAGCGAACAGc > 2:5272030/1‑150 (MQ=255) ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGGGGCCCACGCTGTGGCGGGCCGCAAAGCCGCGCACAGccc > 1:3330820/1‑149 (MQ=255) ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCACCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCa > 2:1371280/1‑150 (MQ=255) tctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAAAAGCCAg > 2:1257387/1‑150 (MQ=255) tctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCAGCGAACAgagat > 2:3078796/1‑146 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGGGGCCCACCCGGTGGCGGGGCGCCCAGCAGCGCACAcccccag > 1:4730664/1‑146 (MQ=255) tCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCCACGCGGTGGAGGGCAGCAAAGCAGCGAACCGCCActgt > 1:1473244/1‑150 (MQ=255) aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCCTCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACGCTGTGCAGGGCCGCAAAGCAGCGAACCGCCAGTGTcg > 2:1242574/1‑149 (MQ=255) aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCCGGGCCGCAAAGCAGCGAACAGCCAGTGTCt > 1:4197698/1‑150 (MQ=255) aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCCGCGGCGGCCCCCCCGGGGGCCGGCCGCAAAGCAGCGAACACCCacggggg > 1:2534508/1‑144 (MQ=255) cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGACCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa < 2:4323142/150‑1 (MQ=255) cGGCACCGATTGCGGGGTCCTGGCCTACCTGTTGCTGGGCATTGACGCCGCCATCTTTGAAAGCCGAGTAACTGCCCGACATGGCGCGTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa < 1:2493638/150‑1 (MQ=255) ggCACCGCTTGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGCCGCCGCCATCTGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:2500178/150‑1 (MQ=255) cACCGCATGCCGGGTCCTGGCCGACCTGTTGCTGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGt < 1:2316100/150‑1 (MQ=255) aCCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCCGCGGCGGCCAACGCGGGGCCGGGCAGCAAAGCACCGAACAGCCCGGGTCTGAGGTg > 2:1044574/1‑150 (MQ=255) gaaTGCGGGGTCCGGGCCGACGTGTTGCTGGGCAATGACGCCGCCATCTTTGAAAGACGAGGAACTGACCCACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCAt < 1:4342914/148‑1 (MQ=255) gCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCAt < 2:2330441/150‑1 (MQ=255) gCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCAACCAGTTAAAGACGTGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCAt < 1:4521031/150‑1 (MQ=255) cttGCCGGGTCCTGGCCGACGTGTTGCAGGGAATTGACGCCGCAATCAGTTAAAGACGAGGAACTGACCGACATCGCGCCTGGCCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATg < 1:1065496/148‑1 (MQ=255) gCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTc < 2:4831892/150‑1 (MQ=255) gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTCTGAGGTGCATGGTCAAt > 2:3188070/1‑150 (MQ=255) gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCGGTGCCGGGCCGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAt > 2:3136600/1‑150 (MQ=255) ggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATc < 2:3761279/150‑1 (MQ=255) ggTCCTGGCCGACCTGTGGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATc < 2:3023201/150‑1 (MQ=255) gTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATcc > 2:2263563/1‑150 (MQ=255) ccTGGCCGACCTGTTGCAGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 1:4328351/150‑1 (MQ=255) gggCCGACCTTTTGCTGGGAAATGACGCCGCCATCAGTGAAAGACGTGTAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTgg < 1:2074281/149‑1 (MQ=255) cGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACCCGGTGCAGGGCCGCAAACCCGCGAACAGCCCGGGTCTGAGTTGCATGGTCAATACATTGCAgg > 1:4119888/1‑150 (MQ=255) aCCTTTTGCTGGGAATTGACGCCGCAATCATTTAAAGACTAGTAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGc < 1:1064805/150‑1 (MQ=255) cTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCACTGTCTGAGGTGCCTGGTCAATCCTTGGCCGGGCGt > 2:4157556/1‑150 (MQ=255) gTTGCTGGGAAATGCCGCCGCCATCAGTTAAAGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCa < 1:1447271/150‑1 (MQ=255) gTTGCAGGGCAATGACGCCGCCAGCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCa < 2:3956834/150‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCAGCGGCGGCCAACGCGGTGCAGGGCAGCAAAGCCGCGGACAGCCCGGGTGTGTGGTGGATGGTCAATCCGTGGCCGGGCGTCACgg > 1:424614/1‑150 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACCCGGTGCAGGGCCGCAAAGCAGCGCACAGCCCGGGGCGGGGGGGCATGGTCAAACCGTGGCGGGGCGGCCCgg > 2:1022659/1‑150 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCGGCGGCGGCCCACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCGTGGCAGGGCGTCACgg > 2:3495403/1‑150 (MQ=255) aGGGAAATCACGCCGCCATCAGTCAAAGACGAGCAACTCACCCACATCGCGCCTTGCCCGCCTGCGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCt < 1:3866187/150‑1 (MQ=255) gggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCGTGGCAGGGCGTCACGGCTc > 2:5068590/1‑150 (MQ=255) cAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACGCGGTGCAGGGCAGCAAAGCAGCGAACAGCCCGTGTCTGTGGGGCATGGTCAATCCATGGCAGGGCGTCACGGCTCAgg > 1:5102953/1‑149 (MQ=255) attGACGCCGCCATCATTGAACGACGAGGAACTGACCGACATCGCGCCTTGGCCGCATGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTc < 1:2681308/148‑1 (MQ=255) aaTGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTc < 2:2412371/150‑1 (MQ=255) aaTGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGANGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTc < 2:4249620/150‑1 (MQ=255) ccgccgcCATCAGTGAAAGACGAGTAACGGACCGACATCGCGCGTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc < 1:1087478/149‑1 (MQ=255) aCGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCAGCGGCGGCCCAAGCGGTGCAGGGCCCCAAAGCACCGAACACCCCGTGTGTGAGGTGCCAGGTCAAAACATTGCAGGGCGTCCACGCGCAGTCAAGc > 1:3736372/1‑150 (MQ=255) cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGcc < 1:5539458/150‑1 (MQ=255) tCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAACCAGCGAACACCCAGTGTCTGAGGTGCATGGTGAATCCGTGGTAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTg > 2:3983598/1‑150 (MQ=255) gTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCCGGGCAGCAAATCAGCGCACAAACACTGTGTGAGGTGCATGGTCAATACTTGGCAGGGCGGCACGGCTCAGTCTAGCCCAGGTGTGCtt > 2:3108159/1‑150 (MQ=255) gACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCGGCGGCCAACGCTGTGGCGGGCAGCCAAACAGCGAAAAGCCAGGGTGTGAGGTGCATGGGCAAAACATTGCAGGGCGTCACGGCGCAGTCTAACCCAGGTATGCTTCAGCgg > 2:1537821/1‑150 (MQ=255) gACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGTAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg < 2:2475495/150‑1 (MQ=255) gACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg < 2:2060036/150‑1 (MQ=255) cGAGCAACTGACCGACATCGCGCCTGGGCCGCCGGCGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCt < 1:1537489/150‑1 (MQ=255) aaCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCt < 1:5267111/150‑1 (MQ=255) aCTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg < 1:5025734/150‑1 (MQ=255) cTGACCGACAACGCGCCTTGCCCGCCTGCGCCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTgg < 2:3440519/150‑1 (MQ=255) ccGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCt < 1:3292645/150‑1 (MQ=255) cGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTc < 2:2176082/150‑1 (MQ=255) cGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTc < 1:1706097/150‑1 (MQ=255) aTCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 2:4423275/150‑1 (MQ=255) cgcCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGc < 2:2940959/150‑1 (MQ=255) ccTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCt > 2:1690767/1‑150 (MQ=255) ttGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc > 2:4201259/1‑150 (MQ=255) ttGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc < 1:5286995/150‑1 (MQ=255) tGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCg > 1:2088681/1‑150 (MQ=255) tGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCg > 2:1947983/1‑150 (MQ=255) ggCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGc < 2:1067924/150‑1 (MQ=255) | CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3471684‑3471982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |