| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,578,242 | G→A | 5.1% | R699C (CGC→TGC) | PP_3155 ← | ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,578,242 | 0 | G | A | 5.1% | 826.3 / 20.4 | 256 | R699C (CGC→TGC) | PP_3155 | ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base G (117/125); new base A (2/11); total (120/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.28e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 260 total aligned reads displayed.
ATGCACTACTCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATCGTGTAG > NC_002947/3578095‑3578390 | aTGCACTACTCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGcgcg < 1:3592129/150‑1 (MQ=255)aTGCACTACTCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCGGGTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGACGGTATAGGAAACGCCGGCCTGCACCGTGcgcg > 1:1299927/1‑150 (MQ=255) actactCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTgc > 2:701281/1‑150 (MQ=255) actactCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTgc > 1:3372318/1‑150 (MQ=255) actactCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTgc > 1:2719733/1‑150 (MQ=255) tactCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTgc‑‑gc > 1:4952687/1‑150 (MQ=255) tactCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACAGTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGCGCACGGTgcag < 2:1402901/150‑3 (MQ=255) tacgCCAACGCCGGGATAACGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGCGCACGGTgcag < 2:1403090/150‑3 (MQ=255) ctCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGCGCACGGTgcaggc < 2:3292665/150‑5 (MQ=255) tCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCgg > 2:2351117/1‑150 (MQ=255) tCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGCGCACGGTgcaggcc < 1:1384386/150‑6 (MQ=255) ccACCGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACCTGACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCggg < 2:5294274/150‑1 (MQ=255) ccAACGCCGGGATAACGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGGTCTACCGCACAGCGTTCGGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCggg < 1:3683717/150‑1 (MQ=255) ccAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGCGCACGGTgcaggccg < 2:538399/150‑7 (MQ=255) ccAACGCCGGGATAAAGCAGCAAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCggg < 1:3839117/150‑1 (MQ=255) cAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCTgggg > 1:1133837/1‑150 (MQ=255) cAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCgggg > 2:5054743/1‑150 (MQ=255) cAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCgggg > 1:4660702/1‑150 (MQ=255) cAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCgggg > 1:1990075/1‑150 (MQ=255) aaCGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGt < 1:957292/150‑1 (MQ=255) gggATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACAt > 1:1799554/1‑150 (MQ=255) aTAAAGCAGCCAAACGACGGCATAGAGTCGTACTCTCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGc > 1:176208/1‑150 (MQ=255) aaGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACCTTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGt < 2:3466164/150‑1 (MQ=255) aaGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGt < 1:4074351/150‑1 (MQ=255) aaGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGt > 1:1710525/1‑150 (MQ=255) agcagcCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGtt > 1:525561/1‑150 (MQ=255) gcCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAAc < 1:648191/150‑1 (MQ=255) aaCGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACgcgc < 2:4599512/150‑1 (MQ=255) aaCGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACgcgc < 2:273237/150‑1 (MQ=255) cATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCa > 1:2868217/1‑150 (MQ=255) tcagaacGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCtt > 2:2684405/7‑150 (MQ=255) tACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCttgt > 1:4756307/1‑150 (MQ=255) agaacGCTGTGCTGTAGAACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCttgt > 1:245514/5‑150 (MQ=255) cTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCttgttg > 2:5124681/1‑150 (MQ=255) cTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCttgttg < 2:1528127/150‑1 (MQ=255) cTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCttgttg > 1:3520111/1‑150 (MQ=255) gCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAac > 1:2237538/1‑150 (MQ=255) gTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACg > 2:2397518/1‑150 (MQ=255) ttCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGt > 1:3507119/1‑150 (MQ=255) cTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCTGCCTGCACCGTGCGCGGTGC‑‑GCCGTGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGttt < 2:1868707/150‑1 (MQ=255) tACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATCCATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGtttt > 2:3490959/1‑150 (MQ=255) tACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGtttt < 2:4394743/150‑1 (MQ=255) tACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGtttt > 2:4160368/1‑150 (MQ=255) gcacagcGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCAc < 2:2986961/150‑1 (MQ=255) cagcGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAAGTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTGTTTCACGTc > 2:4214393/1‑150 (MQ=255) agcGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTcc > 1:1919539/1‑150 (MQ=255) ttCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGAt < 2:4738493/150‑1 (MQ=255) cTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTc < 1:208139/150‑1 (MQ=255) tGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCa > 2:304430/1‑150 (MQ=255) aCGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGctc < 2:3964287/150‑3 (MQ=255) ggggCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACgt > 1:5407811/1‑150 (MQ=255) ggggCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACgt > 2:1740713/1‑150 (MQ=255) ggCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACgtgt > 2:5212556/1‑150 (MQ=255) ccACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTc < 2:4892902/150‑1 (MQ=255) ccACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTc < 2:2061339/150‑1 (MQ=255) ccACTGCGCAGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTc < 1:4702231/150‑1 (MQ=255) cACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCg > 1:3829559/1‑150 (MQ=255) cTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGtt < 1:737559/150‑1 (MQ=255) tGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTg > 1:3975331/1‑150 (MQ=255) ggCCCCGGCAATTCAGAAGGTATAGGACACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCtt < 2:3127098/150‑1 (MQ=255) gCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTg < 1:9020/150‑1 (MQ=255) gCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTg < 1:1018584/150‑1 (MQ=255) cccGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTa > 2:3133407/1‑150 (MQ=255) cccGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCACCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTa < 2:4322994/150‑1 (MQ=255) cGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGa > 1:4536695/1‑150 (MQ=255) cGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGa > 1:3609019/1‑150 (MQ=255) ggCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGaa < 2:2785325/150‑1 (MQ=255) cAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAAc < 2:2778950/150‑1 (MQ=255) aGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACa < 2:4952687/150‑1 (MQ=255) aGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGCTGACCTTGTa > 2:67077/1‑139 (MQ=255) aGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCCTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACa < 2:267290/150‑1 (MQ=255) aaGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCTGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAgg < 2:1133837/150‑1 (MQ=255) aGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGt < 1:1972380/150‑1 (MQ=255) tataGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGa > 1:1531278/1‑150 (MQ=255) ataGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGAc > 2:4790337/1‑150 (MQ=255) taGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGAcc > 1:5142244/1‑150 (MQ=255) aGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCa > 1:773437/1‑150 (MQ=255) ggAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTGGAAGCTCAACAGGTCGACCAc > 2:1601495/1‑150 (MQ=255) ggAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCAc > 2:3607085/1‑150 (MQ=255) gAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACg > 2:3013347/1‑150 (MQ=255) aaaCGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGc > 2:3216543/1‑150 (MQ=255) aaCGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCt < 1:4343305/150‑1 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa > 2:831191/1‑150 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa > 2:3782894/1‑150 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa < 1:4167280/150‑1 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa < 2:1007222/150‑1 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa < 2:1710525/150‑1 (MQ=255) gCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa < 2:2064643/150‑1 (MQ=255) ccGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAg < 1:2384967/150‑1 (MQ=255) cccggcgCACCGCGCACGGTGCAGGCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTa > 1:3228487/7‑150 (MQ=255) cGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAgc < 2:4660702/150‑1 (MQ=255) ccggcgCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAgcg > 1:5608110/6‑150 (MQ=255) ccTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCt < 2:3325339/150‑1 (MQ=255) cTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTc > 1:4928283/1‑150 (MQ=255) cTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTc > 1:1554814/1‑150 (MQ=255) gCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCa < 2:2180022/150‑1 (MQ=255) aCCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATc < 2:4512426/150‑1 (MQ=255) ccGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATCg > 1:3383455/1‑150 (MQ=255) gTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATCgtg > 1:2583014/1‑150 (MQ=255) cgcgGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATCGTGTAg > 2:411293/1‑150 (MQ=255) | ATGCACTACTCCAACGCCGGGATAAAGCAGCCAAACGACGGCATAGAGTCGTACTCGCTGTTCTACAGCACAGCGTTCTGACATTACGGGGCCACTGCGCGGCCCCGGCAATTCAGAAGGTATAGGAAACGCCGGCCTGCACCGTGCGCGGTGC‑‑GCCGGGGTATACATAGCTGTTGAACGCGCCCTCGTCATACCCCTTGTTGAACACGTTTTTCACGTCCAGATTCAACCGCACGTGTTCGTTGACCTTGTAGAAGCTCAACAGGTCGACCACGCTGTAGCGCTCCATCGTGTAG > NC_002947/3578095‑3578390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |