BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,773,252	T→G	9.0%	L92R (CTG→CGG)	PP_5600 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,773,252	0	T	G	9.0%	699.7 / 42.9	233	L92R (CTG→CGG)	PP_5600	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (121/89); new base G (6/16); total (128/105)
Fisher's exact test for biased strand distribution p-value = 1.17e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 235 total aligned reads displayed.

ATGATGCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGC  >  NC_002947/3773102‑3773401

atgatgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTC‑TTTTCGGCCTGCTGACCCt                                                                                                                                                       <  2:4021617/150‑1 (MQ=255)

  gatgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTg                                                                                                                                                      >  1:4807509/1‑150 (MQ=255)

  gatgCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTg                                                                                                                                                      >  1:5542949/1‑150 (MQ=255)

     gccgccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTc                                                                                                                                                   <  1:607113/150‑1 (MQ=255)

     gccgccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTc                                                                                                                                                   >  2:3855504/1‑150 (MQ=255)

     gccgccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTc                                                                                                                                                   <  1:1529509/150‑1 (MQ=255)

      ccgccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCg                                                                                                                                                  >  2:1051942/1‑150 (MQ=255)

      ccgccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCg                                                                                                                                                  >  2:4245384/1‑150 (MQ=255)

        gccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGcc                                                                                                                                                >  2:3697603/1‑150 (MQ=255)

         ccTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCGGCTCGCCg                                                                                                                                               <  2:1543400/150‑1 (MQ=255)

          cTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCgg                                                                                                                                              <  1:3050270/150‑1 (MQ=255)

                 aCGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCg                                                                                                                                       >  1:3967931/1‑150 (MQ=255)

                 aCGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCGGCTCGCCGGCGAGcag                                                                                                                                       <  1:4291403/150‑3 (MQ=255)

                  cGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCgg                                                                                                                                      >  1:4925433/1‑150 (MQ=255)

                   ggCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCggg                                                                                                                                     >  2:5556860/1‑150 (MQ=255)

                   ggCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCggg                                                                                                                                     <  1:3386352/150‑1 (MQ=255)

                    gccgccAGCCGCGGCATGGTCCAAGGTGAGCACGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCCGCGCCACACTGCTGGCCGTCTTTTTCGGCGTGCTGACCCGGCTCGCCGGCGAGCAgggt                                                                                                                                    <  2:5352270/150‑2 (MQ=255)

                    gCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCGGCTCGCCGGCGAGCAgggt                                                                                                                                    <  1:5322390/150‑2 (MQ=255)

                     ccGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCAGCTCGCCGGCGAGCCGGGCa                                                                                                                                   >  1:4497201/1‑150 (MQ=255)

                        aCAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGcc                                                                                                                                <  1:5598969/150‑1 (MQ=255)

                        aCAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTG‑CCCGGCTCGCCGGCGAGCAgggtcagca                                                                                                                               <  1:3448723/150‑7 (MQ=255)

                         cagcagCGGCATGGTCCAAGGTTAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCTTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGccc                                                                                                                               <  1:1876922/150‑1 (MQ=255)

                          agcagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGcccc                                                                                                                              <  2:3044511/150‑1 (MQ=255)

                            cagcGTCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCCGCGAGCCGGGCCGCCCCtg                                                                                                                            >  1:4378897/1‑149 (MQ=255)

                            cagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCtt                                                                                                                            >  1:4982791/1‑150 (MQ=255)

                                  cATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGTTCGCCGGCGAGCCGGGCAGCCCCTTACccaa                                                                                                                      <  1:2960950/150‑1 (MQ=255)

                                     ggTCCGAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACccaacca                                                                                                                   >  1:285185/1‑150 (MQ=255)

                                       tCCAAGGTGCGAAAGACTTCAGCGATCCGACCCTGCCTGCCGGCGGTGTCTGCGTGATCGCCAGCCTGTTCAGCGCCACCCTGCTGGCCGTCTTTTTCGGCCGGCTGACCCTGCTCGCGGGCGAGCCGGGCAGCCCCTTACCcaaccaac                                                                                                                 <  1:407349/150‑1 (MQ=255)

                                       tCCAAGGTGATCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCcaaccaac                                                                                                                 <  1:2903062/150‑1 (MQ=255)

                                       tCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCcaaccaac                                                                                                                 >  2:2738204/1‑150 (MQ=255)

                                         cAAGGTGAGCAAGACTTCAGCGATCCGACCCGGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACCCTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCt                                                                                                               <  1:851103/150‑1 (MQ=255)

                                          aaGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCaaccacccgc                                                                                                              >  2:4185503/1‑148 (MQ=255)

                                             gTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGc                                                                                                           <  1:3514765/150‑1 (MQ=255)

                                             gTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGc                                                                                                           <  1:3697603/150‑1 (MQ=255)

                                             gTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGc                                                                                                           >  1:1732609/1‑150 (MQ=255)

                                                  cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                      >  1:4448530/1‑150 (MQ=255)

                                                     gACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCCGCCCCTTACCCAACCAACCTCCGCCACGCCTg                                                                                                   >  1:5014749/1‑150 (MQ=255)

                                                      aCTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGc                                                                                                  <  2:4304697/150‑1 (MQ=255)

                                                        ttCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGccc                                                                                                <  1:4201118/150‑1 (MQ=255)

                                                          cAGGGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTATTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCaa                                                                                              <  1:4744372/150‑1 (MQ=255)

                                                           aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  1:5411499/1‑150 (MQ=255)

                                                           aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  2:1339069/1‑150 (MQ=255)

                                                           aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  1:2064979/1‑150 (MQ=255)

                                                           aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAag                                                                                             >  2:20675/1‑150 (MQ=255)

                                                                tCCGACCCTGTCTGCCGGCGGTGACTGCGTGTTCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAgcg                                                                                        <  1:677329/150‑1 (MQ=255)

                                                                tCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAgcg                                                                                        <  1:1866339/150‑1 (MQ=255)

                                                                 ccGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAgcgc                                                                                       <  1:892659/150‑1 (MQ=255)

                                                                  cGACCCTGTCTGCGGGCGGTGACGGCGTGATCGCCAGCCTGTTCAGCGCCACACTGGGGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCt                                                                                      <  1:5329096/150‑1 (MQ=255)

                                                                  cGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCCGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCt                                                                                      <  1:2671509/150‑1 (MQ=255)

                                                                  cGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCGTGCTCGCCGGCGAGCCGGGCAGCCCCTTAGCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCt                                                                                      <  2:1198420/150‑1 (MQ=255)

                                                                   gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTg                                                                                     <  2:4106859/150‑1 (MQ=255)

                                                                    ccccTGTGTGCCGGGGGTGACTGCGTGAGCGCCAGCCTGTACCGCCCCACACTGCTGGCCTTATTTTTCGGCGTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTgg                                                                                    <  1:2410042/149‑1 (MQ=255)

                                                                     cccTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGc                                                                                   <  2:5576756/150‑1 (MQ=255)

                                                                     cccTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGc                                                                                   >  2:5466402/1‑150 (MQ=255)

                                                                      ccTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGcc                                                                                  >  1:4253564/1‑150 (MQ=255)

                                                                      ccTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGcc                                                                                  >  1:130231/1‑150 (MQ=255)

                                                                          tCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCCGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTg                                                                              >  1:1579677/1‑150 (MQ=255)

                                                                          tCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTg                                                                              <  1:3855504/150‑1 (MQ=255)

                                                                          gcTGCCGGGGGTGACTGCGTGATCGCCAGCCTGTTCCGCGCCACACTGCGGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGCGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTg                                                                              <  1:3946782/149‑1 (MQ=255)

                                                                            tGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGt                                                                            >  2:3960473/1‑150 (MQ=255)

                                                                            tGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGt                                                                            >  2:2546872/1‑150 (MQ=255)

                                                                             gCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTc                                                                           <  2:5411499/150‑1 (MQ=255)

                                                                              ccGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTC‑TTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCGTACCCAACCAACCTCCGCCCCGCCGGCCCAAGCGGCGCTGGCCACTGGTCaa                                                                         >  1:1884403/1‑150 (MQ=255)

                                                                                ggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCCGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAAt                                                                        >  2:4844205/1‑150 (MQ=255)

                                                                                           cGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctc                                                             >  2:3686920/1‑150 (MQ=255)

                                                                                            gTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCcaaccaac                                                                                                                 <  1:4520542/97‑1 (MQ=255)

                                                                                            gTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCcaaccaac                                                                                                                 >  2:4520542/1‑97 (MQ=255)

                                                                                              gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCGTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                          >  2:77295/1‑150 (MQ=255)

                                                                                               ttCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTccc                                                         <  1:4997307/149‑1 (MQ=255)

                                                                                               aTCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCGTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTccc                                                         <  1:4759568/150‑1 (MQ=255)

                                                                                                 cGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgc                                                       >  1:2197123/1‑150 (MQ=255)

                                                                                                   ccAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCCGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCACGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcgt                                                     >  2:337077/1‑148 (MQ=255)

                                                                                                    cAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCTGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcttc                                                    >  2:4447492/1‑150 (MQ=255)

                                                                                                          gTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtct                                              <  2:1991860/150‑1 (MQ=255)

                                                                                                           ttCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtctc                                             <  2:4119595/150‑1 (MQ=255)

                                                                                                           ttCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCCCGCCTCTCCCGCTTCGCTgctc                                             >  2:5097453/1‑150 (MQ=255)

                                                                                                              aGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTcgcg                                          >  2:1576473/1‑150 (MQ=255)

                                                                                                               gcgcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGA‑CCGGCTCGCCGGCGAGc                                                                                                                                         <  2:5059482/53‑1 (MQ=255)

                                                                                                                cgcCACCCGGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCGCCCGCTTCGCTTCTCGCGtt                                        <  2:73219/150‑1 (MQ=255)

                                                                                                                cgcCACACTGCTGGCCGTCTTGGTCGGCCTGCTGACCCGGCTCGCCGGCGAGCCGGGCAGCCCCTGACCCCACCAACCTCCGCCACGCCTGCCCAAGCAGCGCGGGCCACTGGTCAATCCCCGCGCCTCGCCCGCTTCGCTTCTCGCGtt                                        <  2:3562371/150‑1 (MQ=255)

                                                                                                                 gcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCGTCTCGCGTTc                                       >  1:2555427/1‑150 (MQ=255)

                                                                                                                 gcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCGGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTc                                       <  1:211605/150‑1 (MQ=255)

                                                                                                                  ccACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCt                                      <  1:5134979/150‑1 (MQ=255)

                                                                                                                  ccACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCt                                      >  1:3294449/1‑150 (MQ=255)

                                                                                                                  ccACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCAGCGCCTCTCCCGCTTCGCTTCTCGCGTTCt                                      >  1:1039640/1‑150 (MQ=255)

                                                                                                                  ccACACGGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCGGGCGCGCCGGGCAGCCCCTGACCCCACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCt                                      <  1:2307442/150‑1 (MQ=255)

                                                                                                                      acTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCGCCCCAAGCAGCGCGCGCCACTCGTCAATCCCCGCGCCACTCCCGCGACGCTTCTCGCGTTCTGACa                                  >  2:2881222/1‑150 (MQ=255)

                                                                                                                        tgctgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATc                                >  1:1281600/1‑150 (MQ=255)

                                                                                                                            ggCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCa                            <  2:2000383/150‑1 (MQ=255)

                                                                                                                                     tttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGt                   <  2:4976480/150‑1 (MQ=255)

                                                                                                                                        cGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTgcc                <  1:2328886/150‑1 (MQ=255)

                                                                                                                                         ggCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCCGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCGTCGCTTCTCGCGGTCTGACATCGCCACGTCCCCGTgccg               >  2:2319661/1‑150 (MQ=255)

                                                                                                                                          gCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCCACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCACTCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTgccgc              <  2:4378897/150‑1 (MQ=255)

                                                                                                                                            ctgctgACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCt            >  1:3566098/1‑150 (MQ=255)

                                                                                                                                              gctgACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCAGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGGGCTGACATCGCCACGTCCCCGTGCCGCCTgc          >  1:4893046/1‑149 (MQ=255)

                                                                                                                                                tgACCCGGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATc        <  1:2601397/150‑1 (MQ=255)

                                                                                                                                                 tgcccGGCTCGCCGGCGAGCAGGGTAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCg       >  1:5576173/3‑150 (MQ=255)

                                                                                                                                                  aCCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCgg      >  1:3137967/1‑150 (MQ=255)

                                                                                                                                                    ccTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa    >  1:4606574/1‑150 (MQ=255)

                                                                                                                                                      tGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGc  >  2:1748307/1‑150 (MQ=255)

ATGATGCCGCCTGGTGCACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGGCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGC  >  NC_002947/3773102‑3773401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`