| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,781,365 | T→G | 16.6% | intergenic (+55/‑88) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,781,365 | 0 | T | G | 16.6% | 274.3 / 9.8 | 133 | intergenic (+55/‑88) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (40/67); new base G (19/7); total (59/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.69e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
CGTCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAC > NC_002947/3781216‑3781512 | tCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTgc < 2:2009690/150‑1 (MQ=255) gATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCgtggttggc > 1:1011575/1‑146 (MQ=255) aTCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGcc > 1:340988/1‑150 (MQ=255) aGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGc < 2:1120932/150‑1 (MQ=255) aGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGc < 2:3515940/150‑1 (MQ=255) aGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGc < 2:788640/150‑1 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGACa > 1:3147367/1‑150 (MQ=255) cTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCaa > 1:2451692/1‑150 (MQ=255) tGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCaaa > 1:1833593/1‑150 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 1:1246108/150‑1 (MQ=255) ggAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaaaaa < 2:2848701/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGGGCCCTCGCCGTGGTGCGCCTGCGACAAAAAg < 1:4643146/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCaaaaac > 2:3407407/1‑149 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAg < 2:1266768/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAg > 2:3407647/1‑150 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAgg < 1:1962489/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 2:3343273/150‑1 (MQ=255) gCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGTCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcg < 2:5434944/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac > 2:3260515/1‑150 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCACAAAAgcgccc > 1:4010853/1‑148 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGcac > 2:3260516/1‑150 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAATGCGCACCACCGAAc > 1:1765047/1‑150 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACACAAAGGCGCCCCCCGGCACGTg > 2:4812986/1‑150 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCCCCACGGAAcatt > 2:2421136/1‑147 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCCCCGAACGTg > 1:2329948/1‑150 (MQ=255) cAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGt < 2:5544109/150‑1 (MQ=255) agCCACGGTTTCTTGCGGGTAGGCACCCGTTTCATCCTGCCCTTTTGGCTTGGCTGATCCGACTTTTCTTGAGGGCCGCCGGCATGCGCAGCAATTGCCCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACa < 2:2471358/150‑1 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACCAAAAGGCGCACCACGGAACATGTACaac > 2:2883964/1‑148 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACCGGACATGTAAA‑Gc > 2:2381593/1‑150 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACCACCGCACATGTaaatc > 1:2187213/1‑146 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCTGCGACAAAAATGCGCACCCCCGCACTTGTACA‑Gc > 1:3239726/1‑150 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCAGCGACCAAAAGGCGCACCACGGAACAGGTACA‑Gc > 2:4942819/1‑150 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc < 2:4256533/129‑1 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc > 1:4256527/1‑129 (MQ=255) aGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGACGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACCACCGAAAATGTACA‑ccccc > 1:4184922/1‑149 (MQ=255) ttaaTGCTGGTAGCCACAATGTACATCCTGCCCAGTTCGCTTGGCTCATCCGACTGTTCATGATGCCCGCCGCCATGCGCACCAATTGACCCCTCGCCTTGTTGCGCCTGCGACAAAAAGGCCCACCACGGAACTTGTACA‑GCCCG‑CAAc < 2:2274822/147‑1 (MQ=255) gCTGTTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGAATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGAACCACGGAACTTGTACA‑GCCCG‑CAACGGATg < 2:901322/150‑1 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCgg < 2:2799692/150‑1 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACGTGTACA‑GCCCG‑CAACCGATGCgg > 2:3278412/1‑150 (MQ=255) cccccTGTTCATCCTGCCCCGTGCGGTTGGCTTATCCGAGTGTGCATGCGGGCCGCGGGCTGGCGCAGCCTTTGCGCCCGCGCGGGGGTGCGCCTGCCACAAACCGGCCCCCCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAAt < 2:1086317/146‑1 (MQ=255) cacaCTTTTCAGCCTGCCCTGTTCGCTTGGCTGATCCGAGTGTTCTTGATGGCCGCCGGCATGCGCAGCCATTGAGCCCGCGCGGTGGTGCGCCTGCCACAAAACGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAAt < 2:1659489/150‑1 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGGCAAAAAGGCGCACCACGGAACATGTACA‑GCCCG‑CAACGGCTGCGGCTTaaag > 2:5421280/1‑148 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATg > 2:1828901/1‑150 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAAGGCGCACCACGGAACGTTTAAA‑GCCCG‑CAACCGAGGCGGCGTaaag > 2:1611648/1‑148 (MQ=255) agtGTTCATCCTGCCCAGTTCGCTGGGCTGAGCCGAGTTTTCATGAGGGCCGCCGGCATGCGCAGCCATTGCGCCCGCGCCGTGGGGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATgcg < 2:4742133/148‑1 (MQ=255) acTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCCAAAACGCGCACCACGGAACATGTACA‑GCCCC‑CCACCGGAGCGGCGTAATgcg > 2:3955871/1‑150 (MQ=255) cTGTTCATCGTGCCCTGTTCGGTTGGCTGATCCGCCTTTTCATGTTGGCCGCGGGCTTGCGCTGCCTTTGCGCCCTGGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATgcgc < 2:2468419/150‑1 (MQ=255) cTGTTCATCCTGCCCAGTTCGCTTGGCTTATCCGACGGTTCTTGTTGGCCGCCGGCATGCGCAGCAATTGAGCCCTCGCGGAGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATgcgc < 2:4850023/150‑1 (MQ=255) tGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGGACGTGTACA‑GCCCG‑CAACGGATGCGGCGTAATgcgcg > 2:4219374/1‑150 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATgcgcgc > 2:5520325/1‑150 (MQ=255) ttCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGGCGGCGGCCAAAAAGCGCCCCCCCGCACCTGTACA‑GCCCC‑CCACCGAGGCGGCGGTATGCGCGcc > 1:5289411/1‑150 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAACATGTACA‑GCCCG‑CAACCGATGCGGCTTAATGCGCGCCaaaa > 2:3568214/1‑147 (MQ=255) cTGCCCTTTTCGCTTGGCTTACCCTCCTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCCGTGGTGCGCCTGCCAAAAAACGGCCCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTc < 2:1404624/150‑1 (MQ=255) cTGCCCCGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCAATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTc < 2:1832005/150‑1 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGCCAAAAAGGCGCCCCACGGCACGTGTACC‑GCCCC‑CCCCCGCAGCGGCGTAAGGCGCGCCATAttgg > 2:537762/1‑148 (MQ=255) cctgTTCGGTTGGCTGACCCTCCTGTTATTTTTGCCCGCCGGCATGCGCCGCAATTGCGCCCTGGCGGTGGTGCGCCTCCTAAAAAACGGCCCCCCACGGAACTTGTACA‑GCCCG‑CAACGGATGTGGCTTAATGCGCGCCATATTCGCTc < 1:1225710/147‑1 (MQ=255) ccAGTTCGCTTGGCTGATCGGACTGTTCATGATGGCCGCGGGCAGGCGCAGCCATTGTGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTc < 2:2877153/150‑1 (MQ=255) tgttgtcTTGGCTGATCCTACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGGGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:3014986/144‑1 (MQ=255) tgTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:3943409/149‑1 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCCCGGACCATTTACA‑GCCCC‑CAACCGATGCGGCTTAAAGCGCGCCATAATAGCACGGGTGACTc > 2:4128602/1‑150 (MQ=255) tGGCTGATCCGACTGTTCATGCGGGCCGCCGGAATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCa < 2:4321939/150‑1 (MQ=255) gCTGATCCGACTGTTCTTGAGGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATg < 2:5370523/150‑1 (MQ=255) gCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATg < 2:5601251/150‑1 (MQ=255) aTCCTAGTGTTCATGTGGGCCGCCGGCATGCGCAGCCATTGCGCCCCCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGTCTCATGCttt < 2:187681/150‑1 (MQ=255) aTCCGACTGTTCATGCTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCCCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCttt < 2:3574603/150‑1 (MQ=255) aTCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCttt < 2:814872/150‑1 (MQ=255) cGACTGTTCATGTTGGCCGCCGGATTGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCCACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 1:920921/150‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:5007313/150‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:5007409/150‑1 (MQ=255) tCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCAGGGACCAAAAAGCGCACCACCGAAAATGTAAA‑GCCCG‑CAACCGATGCGGCTTAAATCGCGCCCAATTAGCACCGGTGGCTCCAGCATTaacgtgcacg > 2:1895463/1‑150 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAGGCGCACCACCGAACATGTACA‑GCCCC‑CCACCGATGCGGCTTAATTCGCGCCCAATTAGCTAGGGGGGCGCAGGCTTTaacctgcacggg > 2:3813611/1‑148 (MQ=255) atgaggGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcacgtgcacgtg < 2:4403852/150‑1 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAGGCCCACCACCGGACTTGTACA‑GCCCC‑CAACCGATGCGGCTTAATGCGCGCCCAAATCGCTCGGGTGACTCATGCTTTCacgtgcacgtgc > 2:3816853/1‑150 (MQ=255) ggCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAAGGCGCCCCACGGGACGTGTACA‑GCCCGCCAACGG‑TGGGGCGGAATGCGCGCCCTATTGGCGCGGGGGTCTCATGCGTGAACGTGCACGGGCCCAt > 2:4427301/1‑150 (MQ=255) ccgccgGCATGCGCAGCCATTGCGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTGcacgtgcacgtgaaagcat < 2:1976092/150‑8 (MQ=255) cgccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAACGCGCACCACCGACCGTGTAAACCCCCC‑CCACGG‑TGCGGCGTAATTCGCGCCCTAGTAGCGCGGGGGGCACATGCTTTAACCGGTAAGTGcacaaagt > 2:1075442/1‑146 (MQ=255) gcgggCTTGCGCTGCCATTGTGCCCTCGCCGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:3749185/147‑1 (MQ=255) gccgGCTTGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5076618/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCCCCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:2731651/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:1260689/150‑1 (MQ=255) cgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:4673357/150‑1 (MQ=255) gcttGCGCCGCCTTTGCGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:1928016/147‑1 (MQ=255) gCATGCGCTGCAATTTTGCCTTGGCGGTGGGGCGCCTGCCAAAAAATGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 1:4812986/150‑1 (MQ=255) gCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:4526579/150‑1 (MQ=255) cATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAATGCGCACCACGGAACTTTTACA‑GCCCG‑CAACCGATGCGGCGTAATGCGCGCCAAATTAGCGCGGGTGTCTCATGCTTTAACGTGCACGTGCACAACATTGTCTg > 1:5628309/1‑150 (MQ=255) gccgCCTTTGCGCCCGCGCGGGGGTGCCCCTGCGACAAAACGGCCCCCCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgc < 1:1699367/147‑1 (MQ=255) ccATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgc < 2:1765047/150‑1 (MQ=255) ccATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgc < 2:3686270/150‑1 (MQ=255) aTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACCGATGCGGCGTAAAGCGCGCCAAAATCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCGTTGTCTGTTCgcctgcca > 2:5627458/1‑149 (MQ=255) aTTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAACGCGCACCACGGCACTTGTACA‑GCCCC‑CAAACGCTTCGGCGGAATTCGCGCCAAATTCGCGCGGGTGACGCATGCGGTAACCTGCACGTGCACAACATTGTCGGGTCgcctgccg > 2:4025838/1‑149 (MQ=255) aTTGAGCCCTCGCCGTGGTGCCCCTGCGACAAAAAGGCGCACCACCGCACTTGTACA‑GCCCC‑CAACGGATGCGGCTTAATTCGCGCCATATTAGCTCGGGTGACGAATGCATTCACGTTCACCGGCAAAACGTTGTCAGTTCcccggcca > 2:5627352/1‑149 (MQ=255) gAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCCCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 1:5421280/150‑1 (MQ=255) aGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 2:1752381/150‑1 (MQ=255) aGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:5144766/150‑1 (MQ=255) tggcggtggtgCGCCTGCTAAAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 1:2850772/145‑1 (MQ=255) tCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 1:5044508/150‑1 (MQ=255) ggtggtgCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTc < 1:3098642/149‑1 (MQ=255) ggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAc < 1:5603248/150‑1 (MQ=255) tgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc > 2:895852/1‑140 (MQ=255) tgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc < 1:895852/140‑1 (MQ=255) | CGTCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCG‑CAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAC > NC_002947/3781216‑3781512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |