| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,781,385 | G→C | 9.1% | intergenic (+75/‑68) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,781,385 | 0 | G | C | 9.1% | 367.2 / 3.1 | 146 | intergenic (+75/‑68) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (64/67); new base C (3/12); total (67/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.30e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTGACC > NC_002947/3781236‑3781534 | gCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGTCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcg < 2:5434944/150‑1 (MQ=255) ccGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc < 2:2382866/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac > 2:3260515/1‑150 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGcac > 2:3260516/1‑150 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAATGCGCACCACCGAAc > 1:1765047/1‑150 (MQ=255) agCCACGGTTTCTTGCGGGTAGGCACCCGTTTCATCCTGCCCTTTTGGCTTGGCTGATCCGACTTTTCTTGAGGGCCGCCGGCATGCGCAGCAATTGCCCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACa < 2:2471358/150‑1 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACCAAAAGGCGCACCACGGAACATGTACaac > 2:2883964/1‑148 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAACGCCCCCCACGGAACGTTTAAA‑Gc > 2:491908/1‑150 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACCACCGCACATGTaaatc > 1:2187213/1‑146 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc < 2:4256533/129‑1 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc > 1:4256533/1‑129 (MQ=255) aGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGACGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACCACCGAAAATGTACA‑ccccc > 1:4184922/1‑149 (MQ=255) ttaaTGCTGGTAGCCACAATGTACATCCTGCCCAGTTCGCTTGGCTCATCCGACTGTTCATGATGCCCGCCGCCATGCGCACCAATTGACCCCTCGCCTTGTTGCGCCTGCGACAAAAAGGCCCACCACGGAACTTGTACA‑GCCCGCAAc < 2:2274822/147‑1 (MQ=255) gCTGTTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGAATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGAACCACGGAACTTGTACA‑GCCCGCAACGGATg < 2:901322/150‑1 (MQ=255) cTGGTCGGCACACTGTCCAGCCTGCCCCGTTCGCTTGGCTGACCCGACTGTTCATGCGGGCCGCGGGCTGGCGCAGCCATTGAGCCCGCGCGGTGGTGCGCCTGCGACAAAACGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGc < 2:3014815/150‑1 (MQ=255) cTGGTAGGCACACTGTTCACCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGc < 2:819285/150‑1 (MQ=255) tGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAACATGTACA‑GCCCCCAACCGATGCg > 2:5603248/1‑150 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCgg < 2:2799692/150‑1 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACGTGTACA‑GCCCGCAACCGATGCgg > 2:3278412/1‑150 (MQ=255) caccCTGGTCATCCTGCCCTGTGCGCTTGGCTGATCCGACTTTTCAGGATGGCCGCCGGAATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCCACAACACGGCGCACCACGGAACTTGTACA‑GCCCGCATCCGTTGCgggctgta < 2:4088891/150‑7 (MQ=255) cacaGTGTTCATCCTGCCCATTTCGGTTGGGTGATCCGTCTGTTCATTTTGGCCGCCGGCTTGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCCGCGACAAAACGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAAt < 2:1659732/150‑1 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGGCAAAAAGGCGCACCACGGAACATGTACA‑GCCCGCAACGGCTGCGGCTTaaag > 2:5421280/1‑148 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAAGGCGCACCACGGAACGTTTAAA‑GCCCGCAACCGAGGCGGCGTaaag > 2:1611648/1‑148 (MQ=255) acTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCCAAAACGCGCACCACGGAACATGTACA‑GCCCCCCACCGGAGCGGCGTAATgcg > 2:3955871/1‑150 (MQ=255) cTGTTCATCGTGCCCTGTTCGGTTGGCTGATCCGCCTTTTCATGTTGGCCGCGGGCTTGCGCTGCCTTTGCGCCCTGGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATgcgc < 2:2468419/150‑1 (MQ=255) cTGTTCATCCTGCCCCTTTCGCTGGGCTGAGCCGACGGTGCTTGAGGGCCGCCGGCCGGCGCAGCAATGGCGCCGTGGCCGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATgcgc < 2:4745410/150‑1 (MQ=255) cTGTTCATCCTGCCCAGTTCGCTTGGCTTATCCGACGGTTCTTGTTGGCCGCCGGCATGCGCAGCAATTGAGCCCTCGCGGAGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATgcgc < 2:4850023/150‑1 (MQ=255) tGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGGACGTGTACA‑GCCCGCAACGGATGCGGCGTAATgcgcg > 2:4219374/1‑150 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATgcgcgc > 2:5520325/1‑150 (MQ=255) tCCTGCTCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGCCAAAAACGCGCACCCCCGGACATGTACA‑ACCCGCCACCGAGGCGGCGTAATGCGCGcccaat > 2:2086869/1‑146 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAACATGTACA‑GCCCGCAACCGATGCGGCTTAATGCGCGCCaaaa > 2:3568214/1‑147 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCAGCGACAAAAAAGCCCACCACCGCACAGGTACA‑GCCCCCAACCCAAGCGGCGTAAAGCGCGcccaaa > 2:1962480/1‑146 (MQ=255) cTGCCCTTTTCGCTTGGCTTACCCTCCTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCCGTGGTGCGCCTGCCAAAAAACGGCCCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTc < 2:1404624/150‑1 (MQ=255) cTGCCCCGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCAATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTc < 2:1832005/150‑1 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGCCAAAAAGGCGCCCCACGGCACGTGTACC‑GCCCCCCCCCGCAGCGGCGTAAGGCGCGCCATAttgg > 2:537762/1‑148 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAGGCGCCCCCCCGCACCTGTACA‑GCCCGCCACCGATGCGGCGGAATGCGCGcccgattag > 2:3351973/1‑143 (MQ=255) cctgTTCGGTTGGCTGACCCTCCTGTTATTTTTGCCCGCCGGCATGCGCCGCAATTGCGCCCTGGCGGTGGTGCGCCTCCTAAAAAACGGCCCCCCACGGAACTTGTACA‑GCCCGCAACGGATGTGGCTTAATGCGCGCCATATTCGCTc < 1:1225710/147‑1 (MQ=255) tgTTGGCTTGGCTGAGCCGCGTGTTCTTGTGGGCCGCGGGACTGGGCCCCCTTTGCGCCCTGGCGGTGGGGCGCCTGCCAAAAAATGGCCCCCCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 1:2684419/149‑1 (MQ=255) tgTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:3943409/149‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAAATTGTTCA‑ACCCCCAACGGGTGCGGCTTAATTCGCGCCACGTTCGGGCGGGTgtc > 2:4390704/1‑148 (MQ=255) tGGCTGATCCGACTGTTCATGCGGGCCGCCGGAATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCa < 2:4321939/150‑1 (MQ=255) gCTGATCCGACTGTTCTTGAGGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATg < 2:5370523/150‑1 (MQ=255) gCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATg < 2:5601251/150‑1 (MQ=255) aTCCTAGTGTTCATGTGGGCCGCCGGCATGCGCAGCCATTGCGCCCCCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGTCTCATGCttt < 2:187681/150‑1 (MQ=255) aTCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCttt < 2:814872/150‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:5007313/150‑1 (MQ=255) cGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 2:5007409/150‑1 (MQ=255) cGACTGTTATTTTTGGCGGCCGGATGGGGCAGCAATTGCGCCCTCGCGGTGGTGCGCCTGCGAAAAATTGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 1:893608/150‑1 (MQ=255) gACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAAAGCGCCCCACCGGACATTTAAA‑ACCCGCAACCGATTAGGCGTTATTCGCGCCAAAATAGCTCGGGTGACTCAAGCTTTgacg > 2:564522/1‑150 (MQ=255) gTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCACCGCACGTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCCAATTCGCGCGGGGGACTCATGCTTTcacgtgca > 2:3657338/1‑150 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCCCCACCGGACGTGTTCA‑GCCCGCAACCGCTGCGGCGGAATTCGCGCCCAAATAGCGCGGGTGACACAATCTTTcacgtgcacctg > 2:3812795/1‑150 (MQ=255) atgaggGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcacgtgcacgtg < 2:4403852/150‑1 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAGGCCCACCACCGGACTTGTACA‑GCCCCCAACCGATGCGGCTTAATGCGCGCCCAAATCGCTCGGGTGACTCATGCTTTCacgtgcacgtgc > 2:3816853/1‑150 (MQ=255) cgccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCAAAAAGGCGCACCACCGCCCGAGTAAA‑CCCCCCAACCGCTTCGGGGTAATGCGCGCCCGAGTCGCGCGGGGGGCGCATGCTTTCACGGGTAAGTGcacagagt > 2:1075483/1‑146 (MQ=255) cgccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAACGCGCACCACCGACCGTGTAAACCCCCCCCACGG‑TGCGGCGTAATTCGCGCCCTAGTAGCGCGGGGGGCACATGCTTTAACCGGTAAGTGcacaaagt > 2:1075442/1‑146 (MQ=255) gccgGCTTGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:5076618/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAAAGGCGCCCCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:2731651/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:1260689/150‑1 (MQ=255) cgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:4673357/150‑1 (MQ=255) cgGCAGGCGCAGCCATTGCGCCCTCGCCGTGGTGGGCCTTCGACAAAATGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:1815857/150‑1 (MQ=255) gcttGCGCCGCCTTTGCGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCCCCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:1928016/147‑1 (MQ=255) gCATGCGCTGCAATTTTGCCTTGGCGGTGGGGCGCCTGCCAAAAAATGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 1:4812986/150‑1 (MQ=255) gCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 2:4526579/150‑1 (MQ=255) cATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAATGCGCACCACGGAACTTTTACA‑GCCCGCAACCGATGCGGCGTAATGCGCGCCAAATTAGCGCGGGTGTCTCATGCTTTAACGTGCACGTGCACAACATTGTCTg > 1:5628309/1‑150 (MQ=255) ccATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgc < 2:1765047/150‑1 (MQ=255) ccATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgc < 2:3686270/150‑1 (MQ=255) aTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACCGATGCGGCGTAAAGCGCGCCAAAATCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCGTTGTCTGTTCgcctgcca > 2:5627458/1‑149 (MQ=255) aTTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAACGCGCACCACGGCACTTGTACA‑GCCCCCAAACGCTTCGGCGGAATTCGCGCCAAATTCGCGCGGGTGACGCATGCGGTAACCTGCACGTGCACAACATTGTCGGGTCgcctgccg > 2:4025838/1‑149 (MQ=255) aGCCCTCGCGGTGGGGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 2:2849846/150‑1 (MQ=255) aGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGcc < 1:5144774/150‑1 (MQ=255) tCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 1:5044508/150‑1 (MQ=255) ggtggtgCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTc < 1:3098642/149‑1 (MQ=255) tggtgCGCCTGCGACAAAAAGGCCCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 1:3196240/150‑1 (MQ=255) ggtgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAc < 1:5603248/150‑1 (MQ=255) tgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc < 1:895852/140‑1 (MQ=255) cgcCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgc > 2:3540350/1‑150 (MQ=255) ccTGCGACAAAACGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg < 2:1874888/150‑1 (MQ=255) ccTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACctgctg < 2:4709040/150‑1 (MQ=255) cTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTgg > 1:3374797/1‑150 (MQ=255) gCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCg > 1:1727819/1‑150 (MQ=255) cGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGa < 1:1294519/150‑1 (MQ=255) cGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGa > 2:1742805/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:1541823/1‑150 (MQ=255) gACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGAt > 1:369696/1‑150 (MQ=255) aCAAAATGGCCCCCCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATg < 1:2421136/150‑1 (MQ=255) aCAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATg > 2:1561191/1‑150 (MQ=255) cAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGc > 1:260910/1‑150 (MQ=255) caacaGGCGCCCCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc < 1:5392352/146‑1 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 1:1834060/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 2:4631415/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 1:4297575/1‑150 (MQ=255) aaaaaGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGcc > 2:2913771/1‑150 (MQ=255) aacggCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGc < 1:4942819/147‑1 (MQ=255) aaaGCCCCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGc < 1:1944054/150‑1 (MQ=255) aGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCtt < 2:2563286/150‑1 (MQ=255) aGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCtt < 2:2563208/150‑1 (MQ=255) aGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCtt < 1:150067/150‑1 (MQ=255) aGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCtt < 1:5392106/150‑1 (MQ=255) gcACCACGGCCCTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATAGTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCGTTGTCTGTTCGCCTGCCTCGCCGTGCTGTGCAACCTGCTGGCGATGCCGCTGGAcc > 2:3928214/1‑150 (MQ=255) gcACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTGAcc > 2:1322702/1‑150 (MQ=255) | GCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACA‑GCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCTGCTGGCGATGCCGCTTGACC > NC_002947/3781236‑3781534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |