New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 33781186 (0.700)34 (0.350) 22/206 5.7 34.8% intergenic (‑58/+71) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease
?NC_002947 = 337839 60 (0.620)intergenic (‑86/+43) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

CAGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/337635‑337811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcacgcccgctcccacaggtGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  <  NC_002947/337839‑337692
                                                                                                                                                                                                                                                                                                                                     
CAGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTC                                                                                                                                                                                 >  1:2373766/1‑150
CAGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTC                                                                                                                                                                                 >  2:2793359/1‑150
 AGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCT                                                                                                                                                                                >  2:2322400/1‑150
 AGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCT                                                                                                                                                                                <  1:2957670/150‑1
      AGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCG                                                                                                                                                                           >  1:2422745/1‑150
       GCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          <  1:1393887/150‑1
       GCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          <  2:2422745/150‑1
       GCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          <  1:1609100/150‑1
       GCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          <  2:2257504/150‑1
        CTGGAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGGGCTCGATCAGGAACGGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGCAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGG                                                                                                                                                                         <  2:438078/150‑1
           CAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCgt                                                                                                                                                                      >  1:665353/1‑148
                      AGGGGCGCGGTTTCCACAGCAGTGGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCGTGCCCGCgaaga                                                                                                                                                           <  2:665353/150‑6
                       GGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCGTGCCCGCgaagag                                                                                                                                                          <  2:1309649/150‑7
                        GGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCGTGCCCGCgaagagg                                                                                                                                                         <  2:2749097/150‑8
                        GGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          >  1:2592253/1‑133
                        GGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGG                                                                                                                                                                          <  2:2592253/133‑1
                         GGCGCGGTTTCCACAGCTGCTGGGGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        <  2:1596182/150‑1
                          GCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                       <  1:521541/150‑1
                          GCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                       >  2:521541/1‑150
                          GCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                       <  2:2373766/150‑1
                          GCGCGGTTTCCACAGCTGCTGGTGCTCGACCGGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                                       >  1:80967/1‑150
                            GCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        >  2:2198913/1‑147
                            GCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        <  1:2198913/147‑1
                                     ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAA                                                                                                                                            >  2:157551/1‑150
                                     ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAA                                                                                                                                            >  2:1133787/1‑150
                                     ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                      <  1:1824495/140‑1
                                     ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                      >  2:1824495/1‑140
                                     ACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGCGCACGCCCGCTCCCACAGGTGTAGCGCCAA                                                                                                                                            >  2:1158034/1‑150
                                            CTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACA                                                                                                                                                         <  2:2754634/130‑1
                                            CTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACA                                                                                                                                                         >  1:2754634/1‑130
                                                       TCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTAT                                                                                                                          <  1:1158034/150‑1
                                                       TCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTAT                                                                                                                          <  1:2793359/150‑1
                                                       TCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCA                                                                                                                                                           <  2:2072037/117‑1
                                                       TCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCA                                                                                                                                                           >  1:2072037/1‑117
                                                        CAGTAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGATGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTGGAGGGCCTCTTCGCGGCCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATA                                                                                                                         <  2:798528/150‑1
                                                         AGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGGTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  1:2930479/150‑1
                                                         AGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  1:997742/150‑1
                                                           GAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             <  1:2849300/143‑1
                                                           GAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             >  2:2849300/1‑143
                                                             ACTGGTCGAGGGCCTGGTTCCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGT                                                                                                                    <  1:1691585/150‑1
                                                               TGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        >  2:2038531/1‑112
                                                               TGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        <  1:2038531/112‑1
                                                                     AGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGG                                                                                                            <  1:157551/150‑1
                                                                       GGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGG                                                                                                                  <  2:137603/142‑1
                                                                       GGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGG                                                                                                                  >  1:137603/1‑142
                                                                          CTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGA                                                                                                                >  1:494028/1‑141
                                                                          CTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGA                                                                                                                <  2:494028/141‑1
                                                                                  GGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        <  2:495595/125‑1
                                                                                  GGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATAC                                                                                                                        >  1:495595/1‑125
                                                                                        TTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                          <  2:963760/85‑1
                                                                                        TTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCAC                                                                                                                                                          >  1:963760/1‑85
                                                                                                GGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATA                                                                                                                         >  1:230464/1‑110
                                                                                                GGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATA                                                                                                                         <  2:230464/110‑1
                                                                                                           GTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATA                                                                                                                         <  2:1689654/99‑1
                                                                                                           GTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATA                                                                                                                         >  1:1689654/1‑99
                                                                                                           GTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGG                                                                                                                                <  1:2810985/92‑1
                                                                                                           GTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGG                                                                                                                                >  2:2810985/1‑92
                                                                                                               TTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTA                                                                                                                           <  1:2129429/93‑1
                                                                                                               TTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTA                                                                                                                           >  2:2129429/1‑93
                                                                                                                   GCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             >  2:1784869/1‑87
                                                                                                                   GCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             <  1:1784869/87‑1
                                                                                                                          AAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGT                                                                                                                    <  1:2916491/89‑1
                                                                                                                          AAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGT                                                                                                                    >  2:2916491/1‑89
                                                                                                                            GGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             <  2:427125/78‑1
                                                                                                                            GGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGC                                                                                                                             >  1:427125/1‑78
                                                                                                                                             GAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGA                                                                                                                >  2:1821565/1‑74
                                                                                                                                             GAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGA                                                                                                                <  1:1821565/74‑1
                                                                                                                                                               ACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGG                                                                                                                  >  1:70925/1‑54
                                                                                                                                                               ACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGG                                                                                                                  <  2:70925/54‑1
                                                                                                                                                                 GCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAAAGCAGGAAGGTGTGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGAACCCGCTTCCAGGCC                >  2:417686/1‑150
                                                                                                                                                                 GCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTAGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCC                >  1:561175/1‑150
                                                                                                                                                                 GCCCGCTCCCACAGGTGTAGCCAGGATCGTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCC                >  1:1952769/1‑150
                                                                                                                                                                  CCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGTGGGGTTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCC               <  2:1952769/150‑1
                                                                                                                                                                   tgGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCT              >  2:767558/3‑150
                                                                                                                                                                   CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCT              >  1:2322400/1‑150
                                                                                                                                                                   CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACC                            <  2:281092/136‑1
                                                                                                                                                                   CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACC                            >  1:281092/1‑136
                                                                                                                                                                         CCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCC                                                <  2:1462756/110‑1
                                                                                                                                                                         CCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACAACACATCCTTGCCATGCCCAACCACCTCC                                                >  1:1462756/1‑110
                                                                                                                                                                          CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAG       >  1:1841455/1‑150
                                                                                                                                                                          CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTC                                                 >  2:2265939/1‑108
                                                                                                                                                                          CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTC                                                 <  1:2265939/108‑1
                                                                                                                                                                           ACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGT      >  1:2326185/1‑150
                                                                                                                                                                           ACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGT      >  2:801790/1‑150
                                                                                                                                                                             AGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCCTGCCATGCC                                                           >  1:1734257/1‑95
                                                                                                                                                                             AGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCCTGCCATGCC                                                           <  2:1734257/95‑1
                                                                                                                                                                              GGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCC   <  2:561175/150‑1
                                                                                                                                                                               GTGTAGCGCCAACCTTGAATGTTGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGA                                                                                             <  1:2624020/59‑1
                                                                                                                                                                               GTGTAGCGCCAACCTTGAATGTTGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGA                                                                                             >  2:2624020/1‑59
                                                                                                                                                                               GTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  >  1:2768938/1‑150
                                                                                                                                                                               GTGTAGCGCCAACCTTGAATGTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGA                                                                                                >  1:3026258/1‑56
                                                                                                                                                                               GTGTAGCGCCAACCTTGAATGTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGA                                                                                                <  2:3026258/56‑1
                                                                                                                                                                                                                                                                                                                                     
CAGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/337635‑337811
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcacgcccgctcccacaggtGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTCAAAACCACCACACATCCTTGCCATGCCCAACCACCTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCT  <  NC_002947/337839‑337692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.