| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 699510 | 23 (0.190) | 15 (0.180) +AATTTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTAT |
9/180 | 4.1 | 34.5% | noncoding (77/77 nt) | PP_t05 | tRNA‑Ile |
| ? | NC_002947 | = 5312869 | 61 (0.500) | noncoding (1/76 nt) | PP_t51 | tRNA‑Ala | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTT > NC_002947/699375‑699642 | cTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCa < 2:735308/136‑1 (MQ=32) ccACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTa > 1:1639324/1‑136 (MQ=32) ccACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTa < 1:2284999/136‑1 (MQ=32) acacGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACa > 1:1962290/1‑136 (MQ=32) tGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAg < 2:778147/136‑1 (MQ=32) cTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGcc < 1:769166/136‑1 (MQ=32) gATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTa < 1:155984/136‑1 (MQ=32) aTTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATa < 2:2325378/136‑1 (MQ=32) gTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCATACCTACCATTACATGGTTCAGCCGTAGAATACgg < 2:88856/136‑1 (MQ=17) aaaaGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACgggg > 2:2397103/1‑136 (MQ=32) aaaaGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACgggg < 2:38086/136‑1 (MQ=32) tGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTc > 2:1584662/1‑136 (MQ=32) gCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCa > 2:2710706/1‑136 (MQ=32) gCTGTAACGCTACCATGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGACCAGACCTACCATTACATGGTTAAGCCGTAGAATACGGGGCCATAGCTCa > 2:2229362/1‑136 (MQ=12) gTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCt < 2:3068084/136‑1 (MQ=32) aaaCGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGGTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCTGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTg < 2:526884/135‑1 (MQ=12) ttcGCTACACTGTTATAGGTCTGTAGCTCATTTGGTTAGAGCGCACCACTGATAAGGGTGAGGTCGGCAGTTCTAATGTGCCGAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATATCTCAGCTgg < 1:3121832/134‑1 (MQ=11) aaCGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTgg < 2:1495323/136‑1 (MQ=32) tGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACt < 2:1426143/136‑1 (MQ=32) aGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCa > 1:652023/1‑136 (MQ=32) aGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCa > 1:505287/1‑136 (MQ=32) cTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAAc < 2:1080992/136‑1 (MQ=32) tACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACt > 1:2825858/1‑136 (MQ=32) aCCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACtt < 1:1521984/136‑1 (MQ=32) | CTCCCACACGAATTGCTTGATTCATTGTAAAAGACGATGCTGTAACGCTACCCTGTTATAGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAATCTGCCCAGACCTACCATTACATGGTTCAGCCGTAGAATACGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTT > NC_002947/699375‑699642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |