| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,241,973 | Δ1 bp | 6.6% | intergenic (+32/+26) | grxD → / ← bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,241,973 | 0 | A | . | 6.6% | 615.4 / 35.5 | 182 | intergenic (+32/+26) | grxD/bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base A (80/88); new base . (4/8); total (86/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
Only 100 of 183 total aligned reads displayed.
GTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAG > NC_002947/1241824‑1242115 | gtgGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAAGGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCa > 2:3196842/1‑150 (MQ=255) tgGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAg > 1:885077/1‑150 (MQ=255) gggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 2:1382045/150‑1 (MQ=255) ggTAGCCGGTGAGCTGGTTGGCGGCAGCGACGTCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCg < 1:2490099/150‑1 (MQ=255) gCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtt < 2:1032740/150‑1 (MQ=255) ccGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttt < 2:2467972/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttt < 2:1655795/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtttttt < 1:851081/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 1:3507209/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 2:2148170/150‑1 (MQ=255) tGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTTCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttttt > 2:4196709/1‑150 (MQ=255) tGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttttt < 1:35289/150‑1 (MQ=255) tGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttttt < 2:864147/150‑1 (MQ=255) cTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCggg > 1:1375543/1‑139 (MQ=255) cTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATgg > 2:2128472/1‑150 (MQ=255) cTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATgg < 1:3096484/150‑1 (MQ=255) cggcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATa < 2:712570/150‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGt > 2:2862227/1‑150 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTa < 2:1321066/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTa < 1:355335/150‑1 (MQ=255) gACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTActc > 1:3416701/1‑150 (MQ=255) aCATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTActct < 1:686869/150‑1 (MQ=255) aCATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTActct > 2:1195662/1‑150 (MQ=255) tGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGccc > 1:1000895/1‑150 (MQ=255) gCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCa > 1:4277280/1‑150 (MQ=255) tGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATc > 1:3784405/1‑150 (MQ=255) tgAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGATGCCTTATCTTCCGTCTAGCATAAAAAAACCCGC‑GATCAGCGTGTTTTTTTATGGGGCGAAGAGTAACTATTCGccccata < 1:4118538/149‑5 (MQ=255) ggAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCt > 2:663576/1‑150 (MQ=255) aaaTGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGc < 2:1174367/150‑1 (MQ=255) gTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACt < 2:369933/150‑1 (MQ=255) ttCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTg > 2:699789/1‑150 (MQ=255) tCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGc < 1:530531/150‑1 (MQ=255) cGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGAGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCAGGCAAGCATAAAAAAACCCGA‑GATCAGCGGGTTTTTTTATGGGGCGATTAGTTACTCGTCGCCCATCTGCGACTGCa > 1:3274689/1‑150 (MQ=255) gagaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAg > 2:4182713/1‑150 (MQ=255) aaGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTa < 1:3291339/150‑1 (MQ=255) ggTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGtt > 1:4329485/1‑150 (MQ=255) ggTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGtt < 2:1438353/150‑1 (MQ=255) ggTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGtt > 1:3295485/1‑150 (MQ=255) tGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTCTGGGGCGACTAGTTACTCTTCGCCCAGCTGCGACTGCAGGTAGTtct > 2:4267470/1‑150 (MQ=255) aGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCg < 2:3566149/150‑1 (MQ=255) aGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCg < 1:2460038/150‑1 (MQ=255) cTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGAt < 2:391814/150‑1 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc < 1:1137204/150‑1 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc > 1:2084725/1‑150 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc < 2:688738/150‑1 (MQ=255) cAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGACTAGTTACTCTTCGCCCATCTGCGACTGCGGGTCGTTCTCGATAcc > 2:3552121/1‑150 (MQ=255) aaCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGa < 2:2844309/150‑1 (MQ=255) aaCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GAACAGCGGGTATTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGa < 1:1703543/150‑1 (MQ=255) aCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGAt < 1:4426773/150‑1 (MQ=255) cccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATc < 2:2043663/150‑1 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCt > 1:2881110/1‑150 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCt > 1:3229198/1‑150 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACGGCAGGTCGTTCTCGATACCGATCt > 2:1374212/1‑150 (MQ=255) cTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCtt > 2:2087767/1‑150 (MQ=255) cTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTGTATGGGGCGAAGAGTTACTCTGCGCCCATCTGCGACTGCAGGTCGTTCTCGATACCGATcgg > 1:3143873/1‑148 (MQ=255) ggACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCa < 2:802803/150‑1 (MQ=255) aCGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGc < 1:544101/150‑1 (MQ=255) gcgGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGccc > 1:1218390/1‑150 (MQ=255) gccaaggccaagGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTg > 2:3397960/1‑150 (MQ=255) ccaaggccaaggCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTggg > 1:2185700/1‑150 (MQ=255) ccaaggccaaggCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg > 1:2927760/1‑150 (MQ=255) ccaaggccaaggCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg < 2:3293930/150‑1 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCCAGCATAAAAAAACCCGC‑GATCAGCGGGTTTGTGTATGGGGCGAATAGGTACTCTTCGCCCATCTGCGCCTGCAGGTAGTTCTCGATACCGATCTTGTCGATCCGCCCCAGTTGGGt > 2:3443290/1‑150 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCCTCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGt > 1:3866482/1‑150 (MQ=255) ggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGttt < 2:51435/150‑1 (MQ=255) ggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGttt < 2:3048494/150‑1 (MQ=255) tcaggcTTCAGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTcca > 2:473459/3‑150 (MQ=255) aagtcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccag > 1:204743/1‑150 (MQ=255) aaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccag > 2:4329879/1‑150 (MQ=255) aaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccag > 1:1066964/1‑150 (MQ=255) aaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTcaag > 1:4472462/1‑150 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGt > 2:3407469/1‑150 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGt > 1:1294877/1‑150 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGt < 1:36108/150‑1 (MQ=255) gAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAt < 2:425556/150‑1 (MQ=255) ccTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCCGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGc > 2:157159/1‑150 (MQ=255) ccTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGc < 2:3738876/150‑1 (MQ=255) ccTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGc < 2:51361/150‑1 (MQ=255) cTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCg > 1:2136770/1‑104 (MQ=255) gATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctct < 1:1426860/150‑1 (MQ=255) tCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTc < 1:3033384/150‑1 (MQ=255) ccGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTGGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCg < 2:2663327/150‑1 (MQ=255) gCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGa < 2:975152/150‑1 (MQ=255) gCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGa < 2:4277374/150‑1 (MQ=255) aaaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGat < 2:170391/150‑1 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTTCTCTTCCTCGGACTCGTGGata > 2:4511963/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:293037/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:1594574/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 2:2999306/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata < 2:1780032/150‑1 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCCCGGACTCGAGGata > 1:1635059/1‑150 (MQ=255) aaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGatat > 1:675275/1‑150 (MQ=255) aaaaaCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGatat < 2:932957/150‑1 (MQ=255) aaaCCCGCTGATC‑GCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc < 1:758974/89‑1 (MQ=38) aaaCCCGCTGATC‑GCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc > 2:758974/1‑89 (MQ=38) aCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTc < 2:4186999/150‑1 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 2:3484498/1‑150 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 1:679866/1‑150 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa > 2:1102757/1‑150 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa < 2:767859/150‑1 (MQ=255) | GTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAG > NC_002947/1241824‑1242115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |