| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,844,863 | Δ1 bp | 26.0% | intergenic (+40/‑257) | ccoP‑II → / → PP_4259 | cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,844,863 | 0 | C | . | 26.0% | 333.2 / 135.7 | 131 | intergenic (+40/‑257) | ccoP‑II/PP_4259 | cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (47/50); new base . (16/18); total (63/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 141 total aligned reads displayed.
AGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCA > NC_002947/4844714‑4845011 | aGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTacac > 2:4503916/1‑150 (MQ=255) ggggCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTAcaca < 1:2986992/150‑1 (MQ=255) gATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATcc < 1:2992001/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 1:1580252/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 2:3666037/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 2:3130815/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCtgt < 1:2938977/150‑3 (MQ=255) cGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTa < 1:2583585/150‑1 (MQ=255) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAg < 1:1552806/150‑1 (MQ=255) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAg < 1:28175/150‑1 (MQ=255) ggCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAg < 2:4283429/150‑1 (MQ=255) cgCCCAGGAACAACTGCAGGGCAACGACCAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTACGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAg < 2:1338211/149‑1 (MQ=38) gCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGCCAGTACCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAgg < 2:4446517/150‑1 (MQ=37) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGa > 1:4495269/1‑150 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGa < 1:31292/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGa < 1:230378/150‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAg < 1:1755031/150‑1 (MQ=255) cAGGAACAACTGCAGGGCATCGACACGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGTAGc < 2:3009011/150‑1 (MQ=38) cAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGc < 1:2604673/150‑1 (MQ=255) tgAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:2047933/149‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:367324/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 2:3314095/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACGTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:3332764/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1098867/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:591126/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1470720/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1098773/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCG‑TGTAGGAGCggg < 1:3898879/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCCGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGCggg < 1:1531114/150‑1 (MQ=255) aacaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGt < 2:3056698/150‑1 (MQ=255) aacaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGt < 2:775244/150‑1 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCG‑GGTAGGAGCGGGTTTa > 2:3719461/1‑150 (MQ=255) acTGCAGGGCAACGACAAGGTGCACTTGTTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑c < 1:3777421/150‑1 (MQ=255) acTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑c < 1:305213/150‑1 (MQ=255) tGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑ccc > 2:1864677/1‑150 (MQ=255) cAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGTGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCcgc < 1:2455747/150‑1 (MQ=255) aaCGCCACGGTGCACTGGCTGGCGGCTTACGTCTACCGCCTGGCGCACCCGGCTGCGCCGGCCAAGGCTGCGTAAGCCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTCCAC‑GGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAagag < 2:2743558/150‑1 (MQ=21) caCAAGGTGCACTTGCTGGCGGCTTCCGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTACGGCAGGCCTGGCCACTTCGCGGGTAAC‑CCCGCCCCTACACCGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGcc < 2:1378092/149‑1 (MQ=38) ccatggTGCACTTGCTGGCGGCTTACGTCTACCGCCTGTCGCACCCGGCTGAGCCGGCCACGGCGGCGTAAGGCAGGCCGGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑TGTTGGAGGGGGTTTA‑CCCGCGAAGAGGCCg < 2:3167391/146‑1 (MQ=25) cTTGGTGGCGGCTTACGTCTACCGCCTGTCGCACCTGGCTGCGCCGGCCAAGGGTGAGTACGGCTGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGcac < 2:3937669/150‑1 (MQ=25) cTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCa > 2:675550/1‑150 (MQ=255) gcggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCACCTACACACGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTAATGGGCCCGCAttt > 1:2867593/1‑150 (MQ=37) ggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCTGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCT‑TGTCGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTtct < 2:374787/150‑1 (MQ=255) ttACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGc < 2:4067581/150‑1 (MQ=255) tACGTCTACCGCCTGTCGCACCCGGCTGAGCCGGCCACGGCTTATTAAGGCCGGCCTGGCCTCTTCGGGGTTAAA‑CCCGCTCCTACACAGGATCCT‑GGTCGGAGGGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCa < 2:1653988/150‑1 (MQ=37) aCGTCTACAGCCGGTCGCACCTGGCTGAGCCGGCCACGGCTGAGTAAGGCAGGCCTGGCCTCTGCGCGGGTAAA‑CCCGCGCCTCCACCCGATCCT‑TGTAGGAGCTGGTTAA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAg < 2:3316981/150‑1 (MQ=38) gTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCG‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGc > 2:1370749/1‑150 (MQ=255) gTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGc > 2:3647837/1‑150 (MQ=255) tcAGCCTGGTGCGACAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCCCGCCTACCCAGGATCCG‑TGTAGGAGCGGGTTTA‑ACCCCCAAGAGGCCCGGGCTGGCCCCCCAATTAACGCAGGCaact > 1:4368074/2‑148 (MQ=19) aGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCGACACAGGATCCG‑TGTGGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGGACAGCATTTCTCGCAGGCAAGTGa > 2:2045028/1‑150 (MQ=255) tGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGCCCTg > 2:2641226/1‑150 (MQ=255) cGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCG‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGAt > 2:1488406/1‑150 (MQ=255) aCCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCCAGTGACCGGGATCaa > 2:668906/1‑150 (MQ=255) ccAGGCGGAGCCGGCCACGGCGGAGTAAGGCCGGCCTGGCCTCTTCGCGGGAAAA‑CCCGCTCCTACACAGGATCCT‑TGTTGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAAt < 2:4222639/150‑1 (MQ=37) cAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAC‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAAtt < 2:1460076/150‑1 (MQ=255) gCCGGCCACGGCTGAGTAAGGCTGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCG‑TGTAGGAGGGGTTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCg < 2:470012/150‑1 (MQ=38) catggCTTAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATaa < 2:4369071/147‑1 (MQ=255) ggCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAacac > 2:4107017/1‑150 (MQ=255) tGAGTACGGCTGGCGTGGCCTGTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑GGTTGGCGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGtt < 2:4364608/150‑1 (MQ=37) ggtgTACGGCGGGCCGGGCCTGTTCGGGGGAACC‑CCCGCTCCTACACTGGATCGT‑TGGCGGAGGGGGTTTC‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGtt < 1:3266645/147‑1 (MQ=255) cggcaggcCTGGCCTCTTCGCGGGTAAC‑CCCGCTCCAACACAGGATCCT‑TGTAGGAGGGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATAc < 1:4083479/149‑1 (MQ=255) aggcaggcCTGGCCTCTTCGCGGGTTAA‑ACCGCACCAACACAGGAAGCA‑TGTAGGAGCCGGGTTA‑ACCGCCAAGAGGGCCGGACTGGCACAGCCATTCTCGCCGGCACGTGACCGGGGTCAATTGTCACCCCCCCGGAACCGTTTCATAc > 2:1913423/1‑150 (MQ=255) gctggcgtggcctGTT‑GGGGGTAAACCCCGCCCCCACACTGTTTCTT‑TGTTGGTG‑GGGTTTACCCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCa < 1:902225/147‑1 (MQ=255) gccggcctggcctCTTCGGGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGTGGGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCa < 1:2196980/147‑1 (MQ=255) tctTCGCGGGTAAA‑CCCCCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACAGGCACAGCAATTCTCGCAGGCAAGTGACCTGGATCAAATGACACCCGCCAAAACACGTTTCATAACACGAAACCAAcgc > 2:755969/1‑150 (MQ=37) gcgGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTa > 1:1227744/1‑150 (MQ=255) gTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAgg < 2:1111667/150‑1 (MQ=255) gTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAgg > 1:3919481/1‑150 (MQ=255) gTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAgg > 2:419490/1‑150 (MQ=255) aa‑CCCGCACCTACACAGGATCCT‑TGTCGGAGGGGTTTAA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCg < 1:692983/150‑1 (MQ=255) cccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCa > 2:4002221/1‑150 (MQ=255) cccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCa > 1:3367981/1‑150 (MQ=255) cccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCa > 1:1594796/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAAtt < 1:4112998/95‑1 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:941041/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:1951683/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 2:1194387/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 2:3497221/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 2:1320232/1‑150 (MQ=255) ccGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:277099/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:732770/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:1965946/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 2:1587192/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:2280503/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:2956584/1‑150 (MQ=255) ccGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAg > 1:1965942/1‑150 (MQ=255) cGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGt > 2:2267062/1‑150 (MQ=255) cGCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGt > 2:2531386/1‑150 (MQ=255) gCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTg > 2:1255103/1‑150 (MQ=255) gCTCCTACA‑AGGATCCTGTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTg > 1:2387635/1‑150 (MQ=255) tCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCg > 1:3907178/1‑150 (MQ=255) cTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGaa > 2:2376520/1‑150 (MQ=255) cTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGaa > 2:172524/1‑150 (MQ=255) cTACACACGATACT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCAAAGCATTTCACTCAGGCAAGTGACCTGGATCAATTGACACCAGCCATAACACGTATCATACAACGAACCCAACGCGACTAAAGGTCGCAGTGCGaa > 2:2142440/1‑150 (MQ=38) tACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAc > 1:982780/1‑150 (MQ=255) acacAGGATCGT‑TTTTGGAGCGGTTTTA‑CCCGCGATGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAcc < 2:3833094/150‑1 (MQ=255) acacAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAAcc > 1:1986364/1‑150 (MQ=255) acaGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCa > 1:2100259/1‑150 (MQ=255) acaGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCa > 2:2988431/1‑150 (MQ=255) acaGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCa > 1:3793464/1‑150 (MQ=255) | AGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTGGATCAATTGACACCCGCCATAACACGTTTCATACCACGAACCCAACGCGACTAAAGGTCGCAGTGCGAACCCA > NC_002947/4844714‑4845011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |