| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,231,171:1 | +C | 10.5% | intergenic (‑143/+33) | PP_4606 ← / ← PP_4607 | ferric siderophore receptor/transmembrane sensor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,231,171 | 1 | . | C | 10.5% | 714.0 / 78.1 | 171 | intergenic (‑143/+33) | PP_4606/PP_4607 | ferric siderophore receptor/transmembrane sensor |
| Reads supporting (aligned to +/- strand): ref base . (98/55); new base C (8/10); total (106/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
ACTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGACCTTGCG > NC_002947/5231022‑5231320 | aCTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg < 2:2859810/150‑1 (MQ=255)aCTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg < 2:3942583/150‑1 (MQ=255) cTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑g < 1:3150038/150‑1 (MQ=255) ttCCTGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑gg < 2:3085006/150‑1 (MQ=255) ttCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCCTTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAACTATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑gg < 1:1312219/150‑1 (MQ=255) ttCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑gg < 2:1873015/150‑1 (MQ=255) ttCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑gg < 2:2155305/150‑1 (MQ=255) tCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑ggg < 1:3132728/150‑1 (MQ=255) tCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg‑ggg < 1:2613319/150‑1 (MQ=255) cATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGt < 2:4385501/150‑1 (MQ=255) cATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGt < 2:2930699/150‑1 (MQ=255) tGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGttt > 1:3377472/1‑150 (MQ=255) tGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCC‑CCCGTAGGGGCGGGttt < 2:715612/150‑1 (MQ=39) ggACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTa > 1:3420186/1‑150 (MQ=255) ggACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCC‑CCCGTAGGGGCGGGTTTa < 2:269843/150‑1 (MQ=39) aCGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTAcc > 1:2072561/1‑150 (MQ=255) aCGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCC‑CCCGTAGGGGCGGGTTTAcc < 2:3982029/150‑1 (MQ=39) aCGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTGTCACTCATGACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTGCCTGTGCCAGCCTCTTCACGGGTAAACCC‑CCCGTAGGGGCGGGTTTAc < 2:2666529/150‑1 (MQ=25) cGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCC‑CCCGTAGGGGCGGGTTTAccc < 1:1726356/150‑1 (MQ=39) gCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCg > 1:503818/1‑150 (MQ=255) aGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTg > 2:3483471/1‑150 (MQ=255) tccTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCGGCCCCTACGGG‑GGGTTTACCCGTGaa < 1:2297707/149‑1 (MQ=255) aCCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGaa < 1:1472928/150‑1 (MQ=255) aCCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGaa < 1:1269508/150‑1 (MQ=255) aCCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGaa < 1:4103162/150‑1 (MQ=255) aCCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTAACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGaa > 1:2868403/1‑150 (MQ=255) cTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAaga > 2:1856896/1‑150 (MQ=255) cTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAaga > 2:3622251/1‑150 (MQ=255) gtgAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAgg > 1:2482830/1‑150 (MQ=255) gAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCt < 2:386739/150‑1 (MQ=255) tggggggGATTATTGCGACTCAATCGAACTTTCACTCTTTACACGGATGCCACGTGCGGTTACCCCACCGGTGCCTGGAAATATTTTTG‑CTGTGGCAGCCTCTTCACGGTTAAACCC‑CCCGTAGGGGCGGGTTTACCCGCGAAGAGGccg < 1:761486/149‑3 (MQ=18) gggggTTATAATTCCCAATCAATCGAACTTTAAATCATTACACGGATGCCACGTGCTGTTACCACACCTGTGCCTGCAAATATTTTTC‑CTGTCCCAGCCTCTACACGGGTAAACCC‑CCCGTAGGGGCGGGTTTACCCGCGAAGAGGccgc < 1:3978715/150‑4 (MQ=12) gggggTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTgg < 1:3470305/150‑1 (MQ=255) gggTGATTATTGCGAATCAATCGCACTTTCACTCCTTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGca < 2:3127501/150‑1 (MQ=255) tGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAg > 2:1522175/1‑150 (MQ=255) attGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAAc < 2:1255641/150‑1 (MQ=255) tGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCAACGGG‑GGGTTTAACCGTGAAGAGGCTGGCACAGGCAACTa > 1:30269/1‑150 (MQ=255) gAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCg > 2:1729244/1‑150 (MQ=255) aatcaatcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg < 1:1823202/111‑1 (MQ=255) aatcaatcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACggg > 2:1823202/1‑111 (MQ=255) aatcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCa > 2:3664872/1‑150 (MQ=255) atcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAg < 2:591595/150‑1 (MQ=255) tcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAgg < 1:2230538/150‑1 (MQ=255) tcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAgg < 2:1851069/150‑1 (MQ=255) tcGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTCGAAATATGTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGC‑GGGTGAACCCGTGAAGAGGCTGGCGCAGGCAACTACCGAACCAgg > 2:2128093/1‑150 (MQ=255) cACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTc > 2:3899607/1‑150 (MQ=255) aCTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCa < 2:1247839/150‑1 (MQ=255) tCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGcccc > 1:4377542/1‑150 (MQ=255) tCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGcccc > 1:721773/1‑150 (MQ=255) tCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGcccc > 1:4225890/1‑150 (MQ=255) tCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGcccc > 2:3174082/1‑150 (MQ=255) acGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACgg > 1:2179924/1‑150 (MQ=255) acGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACgg > 2:3375123/1‑150 (MQ=255) ggATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTc > 2:1115987/1‑150 (MQ=255) ggATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTc > 1:2068340/1‑150 (MQ=255) aTGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTg < 2:3604137/150‑1 (MQ=255) ttACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAAccc < 1:1049273/150‑1 (MQ=255) aCCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCAt > 2:4163294/1‑150 (MQ=255) aCCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCAt > 2:818931/1‑150 (MQ=255) cTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCa > 2:2399543/1‑150 (MQ=255) tCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAAACCGCCCCGACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCCAACCAGGGTCAAACGCCCCAAAACCGTAAGCCGTGAAAAAACCATCAc > 1:118762/1‑150 (MQ=255) aCCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACg > 2:3053978/1‑125 (MQ=255) aCCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACg < 1:3053978/125‑1 (MQ=255) aCCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCt > 1:4440060/1‑150 (MQ=255) cTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAAACCATCACCATg > 1:534774/1‑150 (MQ=255) tgtgCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGc > 1:660548/1‑150 (MQ=255) tgtgCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCAACACCTTGc > 1:660293/1‑150 (MQ=255) cTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGc > 1:1797106/1‑150 (MQ=255) cTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCACGGGTAAACCC‑CCCGTAGGGGCGGGTTTa < 1:1387476/61‑1 (MQ=11) cTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCACGGGTAAACCC‑CCCGTAGGGGCGGGTTTa > 2:1387476/1‑61 (MQ=11) cTGGAAACATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGc < 2:4200533/150‑1 (MQ=255) cTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGTAAAACCCATCACCTTGCCCAGCGAATCCAGCGCcagc > 2:607897/1‑150 (MQ=255) tgtgCCAGCCTCTTCACGGGTAAACC‑‑CCCGTAGGGGCGGGTTTACCCGCGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCcagcag > 2:4206394/1‑150 (MQ=25) cagcCTCTTCACGGGTAAACCC‑CCCGTAGGGGCGGGTTTACCCGCGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGc > 2:1016135/3‑150 (MQ=37) gcCTCTTCGCGGGTAAAACCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACAACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTc > 1:1910614/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCgg > 2:3598385/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCgg < 2:3725045/150‑1 (MQ=255) ctctTCGCGGGTAAACCCGCCCCTACGGG‑AGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCgg > 2:893951/1‑150 (MQ=255) ctCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGccc > 1:2726600/2‑149 (MQ=255) tCGCGGGTAAACCCGCCCCTACGTG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCACCAACACGGTCTGCAGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCTGCGGCTCGGCCAc < 2:2802374/150‑1 (MQ=255) tCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCAc < 2:2420622/150‑1 (MQ=255) gcgGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCg > 1:3569288/1‑150 (MQ=255) gcgGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCg < 2:377305/150‑1 (MQ=255) gggTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCggg < 2:158730/150‑1 (MQ=255) gggTAAACCC‑CCCGTAGGGGCGGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCggg > 1:3395358/1‑150 (MQ=39) ggTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGa > 1:3098791/1‑150 (MQ=255) ggTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGATGGCAAAGGCAACAACCGAACCAGGGTCAAACGCCCCAAAACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGa > 1:1665736/1‑150 (MQ=255) ggTAAACCC‑CCCGTAGGGGCGGGTTTACCCGCGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGa > 1:2801400/1‑150 (MQ=38) gTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGaa > 2:268975/1‑150 (MQ=255) tAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAg > 1:372305/1‑150 (MQ=255) tAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAg < 2:1793098/150‑1 (MQ=255) tAAACCC‑CCCGTAGGGGCGGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACATTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAg > 2:4500971/1‑150 (MQ=39) ccGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGcc > 1:1689613/1‑150 (MQ=255) ccccTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCt < 2:1579567/150‑1 (MQ=255) cccTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGccg > 2:3243216/1‑148 (MQ=255) cccTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTg < 1:1042969/150‑1 (MQ=255) ccTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGa < 1:3676048/150‑1 (MQ=255) tACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGAcc > 1:2322119/1‑150 (MQ=255) cGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGACCtt > 2:2290415/1‑150 (MQ=255) ggg‑gggTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGACCTTg > 2:1082/1‑150 (MQ=255) | ACTTCATGGACGCAGACCTGTGAGGGGGTGATTATTGCGAATCAATCGCACTTTCACTCATTACACGGATGCCACGTGCTGTTACCTCACCTGTGCCTGGAAATATTTTTG‑CTGTGGCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGG‑GGGTTTACCCGTGAAGAGGCTGGCACAGGCAACTACCGAACCAGGGTCAAACGCCCCAACACGGTCTGCCGTGAAAAACCCATCACCTTGCCCAGCGAATCCAGCGCCAGCAGCGGCTCGGCCACCGGGAAGCTGCCGCTGACCTTGCG > NC_002947/5231022‑5231320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |