| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,683,757:1 | +C | 5.0% | coding (79/1431 nt) | mltD → | membrane‑bound lytic murein transglycosylase D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,683,757 | 1 | . | C | 5.0% | 810.4 / 33.5 | 179 | coding (79/1431 nt) | mltD | membrane‑bound lytic murein transglycosylase D |
| Reads supporting (aligned to +/- strand): ref base . (87/83); new base C (5/4); total (92/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 | |||||||||||
Only 100 of 187 total aligned reads displayed.
CAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATG > NC_002947/4683608‑4683906 | cAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAg < 1:1394653/150‑1 (MQ=255)cAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAg > 1:3300921/1‑150 (MQ=255) naaGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑c > 1:2107930/2‑150 (MQ=255) aGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCa > 1:2574040/1‑150 (MQ=255) gTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCAcc > 2:4403822/1‑150 (MQ=255) gTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCAcc > 2:4403629/1‑150 (MQ=255) tGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCtt < 2:960988/150‑1 (MQ=255) gACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtg < 2:1081433/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt < 2:2917066/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt < 1:3019798/150‑1 (MQ=255) ccAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggt > 2:795657/1‑150 (MQ=255) aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTtggtgg > 2:2459944/1‑150 (MQ=255) cGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGc > 2:1215223/1‑150 (MQ=255) gAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCa < 2:2630329/150‑1 (MQ=255) aGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCag < 2:1559487/150‑1 (MQ=255) gCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCaga < 1:3908604/150‑1 (MQ=255) gCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCaga < 2:334070/150‑1 (MQ=255) cGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCagag < 1:3818439/150‑1 (MQ=255) tttCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCTCTGGCAGCCCACCAAGGT‑GGCTGCCAGGGcca < 2:4043580/150‑3 (MQ=255) tCTAGAATCGCCGAACTTTTTCGTCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCAccc > 2:2000715/1‑150 (MQ=255) tAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGt < 2:4233903/150‑1 (MQ=255) gAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAACTCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCa < 1:2888301/150‑1 (MQ=255) tCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCt > 2:3516396/1‑150 (MQ=255) ccGAACTTTTTCGCCCGGATAGCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCAGTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga < 1:1637956/150‑1 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga > 1:1730852/1‑150 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTcga > 2:434430/1‑150 (MQ=255) ccGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCGTGGTGGGCTGCCAGAGCACCCGTCAGCTcga > 1:1541564/1‑150 (MQ=255) cTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAAt < 2:2687602/150‑1 (MQ=255) ttttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATcc > 2:2495704/1‑150 (MQ=255) ttttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATcc < 2:1791930/150‑1 (MQ=255) ttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCCGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGa < 1:96623/150‑1 (MQ=255) ttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGa < 2:2501667/150‑1 (MQ=255) cGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATa < 1:2119038/150‑1 (MQ=255) cGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATa < 1:1462784/150‑1 (MQ=255) cccGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGc < 2:2085226/150‑1 (MQ=255) cccGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGc < 1:654350/150‑1 (MQ=255) ggATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGtt > 2:2196318/1‑150 (MQ=255) ggATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGtt > 2:2196201/1‑150 (MQ=255) tACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgc < 2:1299806/150‑1 (MQ=255) tACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCAGTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgc < 1:4154471/150‑1 (MQ=255) cTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgcgcg > 1:1782618/1‑150 (MQ=255) tGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCCACCAAGGT‑GGCTGCCa > 1:3902929/1‑109 (MQ=255) gTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGca < 1:3440513/150‑1 (MQ=255) cGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTAcc > 1:1013830/1‑150 (MQ=255) gATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCa < 2:2748152/150‑1 (MQ=255) aTGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAg < 1:3883121/150‑1 (MQ=255) aTGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAg > 2:4476878/1‑150 (MQ=255) ttCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACg > 2:1859141/1‑150 (MQ=255) cccGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGa > 2:4113865/1‑150 (MQ=255) cccGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGa < 2:3922211/150‑1 (MQ=255) ccGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGAt > 2:4449301/1‑150 (MQ=255) tAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCaa > 1:106181/1‑150 (MQ=255) aGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAg < 1:3892227/150‑1 (MQ=255) aGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACaaa < 1:4489328/150‑1 (MQ=255) gAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAAc < 1:1641733/150‑1 (MQ=255) ccTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATcc > 1:1680114/1‑101 (MQ=255) ccTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATcc < 2:1680114/101‑1 (MQ=255) ccTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCtt > 1:3129549/1‑150 (MQ=255) ctctCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTc > 1:2403409/1‑150 (MQ=255) ctctCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTc > 2:3525029/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:777946/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:2848826/1‑150 (MQ=255) tctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcc > 1:3981348/1‑150 (MQ=255) ctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTccc < 2:535090/150‑1 (MQ=255) ctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTccc > 1:4231060/1‑150 (MQ=255) ctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTccc > 2:3667438/1‑150 (MQ=255) ctcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTccc < 1:3628987/150‑1 (MQ=255) cATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCg < 2:1374755/150‑1 (MQ=255) aTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgc > 1:334334/1‑150 (MQ=255) aTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgc > 2:3777057/1‑150 (MQ=255) cGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgctgct > 2:3181042/1‑150 (MQ=255) cGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCgctgct > 2:2394175/1‑150 (MQ=255) cGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACATTCCCCgctgct > 2:3384342/1‑150 (MQ=255) gTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGctgctg < 1:3072301/150‑1 (MQ=255) tCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTgg > 2:3798905/1‑150 (MQ=255) tCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTgg > 2:4329955/1‑150 (MQ=255) cGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGt < 2:2835157/150‑1 (MQ=255) gCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGTATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTc < 1:2061341/150‑1 (MQ=255) cccTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCa > 1:3929702/1‑150 (MQ=255) cccTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCa > 1:3924640/1‑150 (MQ=255) ccTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCaa > 1:269121/1‑150 (MQ=255) tGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgc < 2:870319/150‑1 (MQ=255) aCGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccg < 2:2391741/150‑1 (MQ=255) gcgcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggc > 1:2388070/1‑150 (MQ=255) gcgcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggc < 1:1284679/150‑1 (MQ=255) gcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggccg < 1:2376966/150‑1 (MQ=255) gcCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggccg < 1:151357/150‑1 (MQ=255) tGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAAc > 1:2750068/1‑150 (MQ=255) ggCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACa < 2:305879/150‑1 (MQ=255) gCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAg < 1:3376033/150‑1 (MQ=255) ccAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTTCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGgc > 1:3731041/1‑150 (MQ=255) ccAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGgc > 1:4221070/1‑150 (MQ=255) cAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGgcg > 1:3755930/1‑150 (MQ=255) tCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGcgccgc < 1:4256437/150‑1 (MQ=255) tGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGa > 2:2034723/1‑150 (MQ=255) cgcTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGATCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATg > 1:46184/1‑150 (MQ=255) tGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCt < 2:3216461/150‑1 (MQ=255) gCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTgg < 1:2847999/150‑1 (MQ=255) cTGGCAGCCCACCAAGGT‑GGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAg > 1:1847828/1‑150 (MQ=255) gCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAgcgc > 1:1974846/1‑150 (MQ=255) | CAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAG‑CCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATG > NC_002947/4683608‑4683906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |