New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	295685 =	154 (0.780)	16 (0.090)	11/258	NT	10.2%	intergenic (+32/+110)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295774 =	138 (0.750)					intergenic (+121/+21)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator

TCTGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/295840‑295685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaagggcCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACACCC  >  NC_002947/295774‑295922                                                                                                                                                                                                                                                                                                                   TCTGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCG                                                                                                                                                             >  2:2887034/1‑150   TGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA                                                                                                                                                           <  1:127907/150‑1   TGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA                                                                                                                                                           <  1:892079/150‑1   TGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA                                                                                                                                                           <  2:128988/150‑1   TGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA                                                                                                                                                           >  1:3888842/1‑150   TGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAA                                                                                                                                                           >  1:3888823/1‑150    GGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAG                                                                                                                                                          >  2:4091498/1‑150    GGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAG                                                                                                                                                          <  2:590479/150‑1     GGGTTGTATCTGCCGCCGTTTCTGGCAAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGG                                                                                                                                                         <  1:4279190/150‑1     GGGTTGTATCTGCCGCCGTTTCTGGCAAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGG                                                                                                                                                         <  1:4279210/150‑1      GGTTGTCTCTGCCGCCGTGTCTGGCCACGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGG                                                                                                                                                        <  2:4261233/150‑1      GGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGG                                                                                                                                                        <  2:3119382/150‑1      GGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGG                                                                                                                                                        <  2:1837928/150‑1      GGTTGTATCTGCCGCCGTTTCGGGCCACGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGG                                                                                                                                                        <  2:1635355/150‑1                                             GAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGG                                                                                                                 >  2:1639599/1‑150                                                    CTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCGTGCGAGTACCGGTGGGAGCGGGCGTGCCGGCGCAGGGCTGCAAAGCAGCCCCAGATGTCTCAGCTGGAACGCTGGGCCAGAAA                                                                                                          >  2:1714701/1‑150                                                     TGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAC                                                                                                         >  1:2330148/1‑150                                                         GCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCG                                                                                                     >  1:1720200/1‑150                                                              TTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCTGCAAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGA                                                                                                >  2:993541/1‑150                                                                      CCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAG                                                                                                                                                          <  1:155176/84‑1                                                                      CCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAG                                                                                                                                                          >  2:155176/1‑84                                                                        TTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTGGGCCAGAAACGGCGGCAGATACAACCCCc                                                                                      >  2:2906306/1‑149                                                                        TTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACACCCCCA                                                                                      >  1:4182811/1‑150                                                                             GGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATAC                                                                                 >  1:3322560/1‑150                                                                                 AAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTT                                                                             >  2:3798963/1‑150                                                                                 AAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTT                                                                             >  2:3798941/1‑150                                                                                    CCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGA                                                                          >  2:1675690/1‑150                                                                                      CGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAAC                                                                        >  1:573595/1‑150                                                                                         TCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACC                                                                     >  1:3182516/1‑150                                                                                            CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGC                                                                  >  2:202607/1‑150                                                                                            CACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGC                                                                  >  2:2460389/1‑150                                                                                                    CCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTC                                                          >  1:2441542/1‑150                                                                                                                                                    atctgGGGCCGCTTGGCGGCCCTAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGC          >  1:3631130/6‑150                                                                                                                                                    GCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGC          <  2:482366/150‑1                                                                                                                                                    GCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGC          <  1:2148991/150‑1                                                                                                                                                     tctgGGGCCGCTTGGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCA         >  1:2568001/5‑150                                                                                                                                                     tctgGGGCCGCTTGGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCA         >  1:1591944/5‑150                                                                                                                                                        gGGGCCGCTTGGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATAC      >  2:2503950/2‑150                                                                                                                                                        gGGGCCGCTTGGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATAC      >  2:2160285/2‑150                                                                                                                                                        gGGGCCGCTTGGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATAC      >  2:1350419/2‑150                                                                                                                                                        AGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATAC      >  2:985886/1‑150                                                                                                                                                         GGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACA     >  2:3121069/1‑150                                                                                                                                                          GGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACAC    >  1:262985/1‑150                                                                                                                                                           GCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACACC   >  2:3161914/1‑150                                                                                                                                                            CCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACACCC  <  2:3719321/150‑1                                                                                                                                                                                                                                                                                                                   TCTGGGGTTGTATCTGCCGCCGTTTCTGGCCAAGCGTTCCAGCTGAGAAATCTGGGGCCGCTTGGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAGAGCCCGCGCGCACCCTGGAGCTTGCGAGTACCTGTGGGAGCGGGCGTGCCGGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/295840‑295685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaagggcCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGACCGTGCATACACCC  >  NC_002947/295774‑295922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.