| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 786595 = | 171 (0.870) | 17 (0.090) | 11/254 | NT | 9.8% | intergenic (+14/‑291) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
| ? | NC_002947 | 786703 = | 156 (0.860) | intergenic (+122/‑183) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor | |||||
AGGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/786754‑786595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > NC_002947/786703‑786848 AGGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGG < 1:1121644/150‑1 GGGGCCTATGGTGGGGTGTTATCAGTGCGGTCACTGGGATCAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGG < 1:3050305/150‑1 GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGATTTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGG < 1:3050248/150‑1 GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGACTTCTTGGCCTGTGCCGGCCTCTTCGCGGGCAGGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGG < 1:2779682/150‑1 GGGCCGATGGTGGGGTGTGATCAGTGCGGTCACGGGGATGAAGTCCTTGCCTGTGCCGGCCTCGTCGCGGGCAGGCCCGCTCCCCCAGCGTCACCACCGCGCCTGAAGAATCCGCGCTTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC < 2:2630705/150‑1 GGGCCGATGGGGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATGGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC < 1:4283551/150‑1 GGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCC < 2:4101483/150‑1 GCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCG > 2:2863222/1‑150 CCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGG > 2:566675/1‑150 CCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGG < 2:1736215/150‑1 CCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGG < 2:1736202/150‑1 CGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGC > 2:4087642/1‑150 GATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA > 2:472236/1‑150 ATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCAC > 2:3202770/1‑150 ATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTATGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCAC > 2:1369998/1‑150 TGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACA < 2:1555296/150‑1 GGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAG < 2:1112634/150‑1 ATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTGCTGTGGGTGCGGGCGTGCCCGCGAAGAGGCCGGCCCAGGCCATGAGTTCATCCCAGTGACCGCACTGATCACACC > 2:4425716/1‑150 ATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCACTGAATTCATCCCAGTGACCGCACTGATCACACC > 2:1708892/1‑150 TGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCA > 2:4393676/1‑150 CGGCCTCTTCGCGGGCATGCCCGCTCCCACCGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCACAGGCCATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGC > 2:481709/1‑150 CGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGC > 2:481762/1‑150 GGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCC > 1:1366888/1‑150 GGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCA > 1:2570446/1‑150 GGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCA > 1:2570477/1‑150 GCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCCATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAAC > 2:2569242/1‑150 CCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCG > 1:3000005/1‑150 CGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGC > 1:3865573/1‑150 CGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGC > 2:1601018/1‑150 GCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCG > 1:1216243/1‑150 CTCCCACAGCGTCTCCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGT > 2:1141745/1‑150 CCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGG > 1:261183/1‑150 GCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTT < 2:3865573/150‑1 GCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTG < 1:4393676/150‑1 GCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCCTCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGG < 2:2684727/150‑1 GCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGG < 2:2160509/150‑1 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC > 2:314588/1‑150 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC > 2:462922/1‑150 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC > 2:463138/1‑150 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC < 1:3733266/150‑1 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC > 2:2666648/1‑150 CGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGATCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGC > 2:2666413/1‑150 CACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGAT > 2:2352309/1‑150 ACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGACTGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > 2:1965615/1‑150 ACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > 1:2899353/1‑150 ACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > 2:815231/1‑150 ACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGGTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > 1:1807227/1‑150 AGGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/786754‑786595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATC > NC_002947/786703‑786848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |