| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1531788 = | 67 (0.340) | 6 (0.040) | 6/228 | NT | 10.3% | coding (130/630 nt) | PP_1344 | hypothetical protein |
| ? | NC_002947 | 1531884 = | 49 (0.300) | coding (34/630 nt) | PP_1344 | hypothetical protein | |||||
GTTTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531960‑1531788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGA > NC_002947/1531884‑1532031 GTTTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCC < 2:1520636/150‑1 TTTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCC < 1:4248487/150‑1 TTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCC < 2:3888417/150‑1 AGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGGGTACCCGCGCCTACAAGATACCCAAAACCCGGGCAGGCGCGGGTTCCCCCccc > 1:1051889/1‑147 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGA < 1:846581/150‑1 GGGGCATTTTCACTGAGTTCACGGCGTGGCAACATGAAAGCGATCGAGACCCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACACGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAG < 2:2912988/150‑1 GGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTGGCGGGTGAACCCGCGCCGACAAGATAACCATAAACCAGGCCGGGGCGGGGTACCCCGCGCAGAGGC > 2:428180/1‑150 GGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCCCTCCAACAAGATAACCATAACCCAGGCAGGAGCGGGGTCCCCCCCGAACAGGC > 2:2103042/1‑150 GGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCCGGTGAACCCGCACCTACAAGAAACCGAAAACCCAGGCAGGAGCGGGTTCCCCCCCGAAGAGGC > 2:2102448/1‑150 cCACTGATTACACGGCTTGGAAACATCAAAGCTAGCGACAACCATTCTTGTCTTTGGCTGCCTGGGCCGGCATCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACA < 2:149413/149‑1 TTCGCGGGTGAACCCGCTCCTACAAGATAACGATAACCCAGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCGAT > 1:1283092/1‑150 CGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAA > 2:1206386/1‑150 ACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGC > 2:1721312/1‑150 CCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCC > 2:1811097/1‑150 GCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCC > 1:3028560/1‑150 CGGGTACCCCCGCTAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCA < 1:3479431/150‑1 gtacCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACC < 1:1559192/146‑1 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 2:2156607/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 2:3492945/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 1:439760/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 1:1587633/1‑150 ctCGAAGAGGCCGGCACAGGCAGCCAAAGACTAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCT < 1:3412179/148‑1 CGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCT < 1:1839020/150‑1 GCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTC > 2:2019404/1‑150 GAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCAC > 1:1878037/1‑150 AAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACC > 2:2197476/1‑150 AGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATC < 1:1206386/150‑1 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 2:3728883/1‑150 CGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTT > 1:1771702/1‑150 CGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTT > 1:1771592/1‑150 CGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTT > 1:1235101/1‑150 GGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTC > 1:3502164/1‑150 GCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTcg > 1:2963578/1‑148 GCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > 1:2963535/1‑150 GCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > 2:2090736/1‑150 CAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGA > 1:4351759/1‑150 GTTTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531960‑1531788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGA > NC_002947/1531884‑1532031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |