| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2499874 = | 163 (0.830) | 9 (0.050) | 6/254 | NT | 5.8% | intergenic (+10/‑191) | PP_2192/PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor |
| ? | NC_002947 | 2499972 = | 141 (0.780) | intergenic (+108/‑93) | PP_2192/PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor | |||||
CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500032‑2499874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccggaCAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTCGCGG > NC_002947/2499972‑2500120 CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAA > 2:2405980/1‑150CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAA < 2:2181014/150‑1CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAA < 1:3759700/150‑1CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAA < 1:2570832/150‑1 ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAG > 2:970128/1‑150 ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAG < 2:246353/150‑1 ACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCAGCTCCTACAACGACTGCGCCCGCCTGAAGATAGTGCGATCTGTGCAGGAAAGGGCTTG‑CCGCTAAG > 1:984254/1‑150 CTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGA < 1:264758/150‑1 TACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAG > 1:1863880/1‑150 ACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGG > 1:4100873/1‑150 CGACGATCTGGCTTGCAGGAACTTGCAGTGCCAACTGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGC < 1:3219726/150‑1 CGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGC < 1:2926080/150‑1 GACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCC > 2:3352793/1‑150 GACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCC > 1:3096211/1‑150 ACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCG > 1:2632959/1‑150 ACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCG < 2:363356/150‑1 ACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCG < 1:4250136/150‑1 ACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCG < 1:2270558/150‑1 CGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTTAGAGGCCGG < 2:3005021/150‑1 CGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGG < 2:4078621/150‑1 CTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTGCGCGGGCAAGCCCGCGCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCCGTGCAGGACCGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTT < 1:1980850/150‑1 GGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTC > 1:2192825/1‑150 GGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTC > 1:3426097/1‑150 GGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTC > 2:1354910/1‑150 CTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTA > 1:503690/1‑150 TTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTG > 2:214411/1‑150 CGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGA > 1:1410784/1‑150 CGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTGCCCGCGAAGAGGCCGGACAGAAATAAAAATATTTTCCAATTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGA > 1:1410785/1‑150 CCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGaa > 1:2867172/1‑148 AAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACC > 2:277900/1‑150 AAGAGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACC < 1:399094/150‑1 AGGCCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCC < 1:460780/150‑1 GCCGGACAGACATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGT > 1:1773702/1‑150 CCGGACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTC > 1:2034784/1‑150 ACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTCGCGG > 2:2688447/1‑150 ACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTCGCGG < 2:3096008/150‑1 ACAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTCGCGG < 2:1197549/150‑1 CACTACGACGATCTGGCTTGCAGGAACTTGCAGTGCCAAATGGAAAATATTTTTATTTCTGTCCGGCCTCTTCGCGGGCAAGCCCGCTCCTACAACGACTGCGCCCGCCTGAAGATTGTGCGATCTGTGCAGGAACGGGCTTG‑CCGCTAAGAGGCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2500032‑2499874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccggaCAGAAATAAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGCTCAAGCCCTTGCACCGCCGTCGCGG > NC_002947/2499972‑2500120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |