| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3341082 = | 80 (0.410) | 7 (0.040) | 7/232 | NT | 8.3% | intergenic (‑119/+124) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase |
| ? | NC_002947 | 3341170 = | 88 (0.530) | intergenic (‑207/+36) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase | |||||
GGTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3341250‑3341082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3341170‑3341318 GGTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCCCACGTATTGGACGCTTGTGGGGCCTTGGGAGAG > 1:2478806/1‑150 GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGC < 2:633133/150‑1 ACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGG < 1:307565/150‑1 ACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGG < 2:2595175/150‑1 ACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGG < 2:2234473/150‑1 CTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCCCAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGC > 1:353186/1‑150 CTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGC > 2:3878290/1‑150 CTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGC > 2:2962822/1‑150 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCc > 2:1339988/1‑149 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCA > 2:1339601/1‑150 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCGTGCCCGCGCCCCCAGGGACCGCACACGGGTTGGACGCGTGTGGGGCCGTGGGGGAGCGGGCc > 1:4205979/1‑149 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAA < 1:3502920/150‑1 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAA < 2:1961573/150‑1 GATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGC < 2:3591613/150‑1 GACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCCAGCCCG > 2:2274043/1‑150 CTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCG > 2:3844774/1‑150 TACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGGGGGCTTGCCCGCTCGCACTGGGACCGCAGAGGTATTGGACGCTTGTGGGGGGTTGGGAGAGCGGGCTAGCCCGCGA > 2:3549361/1‑150 TACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGA > 2:4520998/1‑150 ACCTGCTTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAA < 2:3283297/150‑1 ACCTGCGTCGCCAGGGTGTGCTGGTCTGATTGCTGGGACGGCCTGGCCATCTCGGAGGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAA < 2:238320/150‑1 ACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCAGCGCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCTTGCCCGCtct < 2:4165795/150‑4 CTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACCGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGg > 2:882787/1‑149 CTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCAAAGGTAATGGACGCATGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGA > 2:1518543/1‑150 CTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCACCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGA > 1:2537211/1‑150 CTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCGTGCCCGCTCCCACCCGGACCGCCCAGGGAATGGGCGCGTGTGGGGCCGTGGGGGTGCGGGCCAGCCCGCccagc > 1:4198306/1‑145 CTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCGTGCCCGCGCCCCCCGGGACCGCACAGGTATTGGACGCGTGTGGGGCCTTGGGAGAGCGGGCCAGCCCCCGCAGA > 1:278639/1‑150 TGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCGTGTGGGGCCTTGGGAGAGCGGGCACGCCCGCGAAGAG > 2:3218815/1‑150 TTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGT > 1:3024314/1‑150 TGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTA > 1:2498630/1‑150 GCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAG > 2:1822933/1‑150 CCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGG‑‑‑‑‑‑‑‑‑‑GAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAG > 1:690250/1‑150 GCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCCAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCCGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTAC > 1:3638307/1‑150 GGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTC > 2:1811360/1‑150 GACGCTTGTGGGGCCTTGGGAGAGCGGGCAAACCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCG > 1:914321/1‑150 cctcttcGCGGGCTTGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCG > 1:225619/8‑150 ttcGCGGGCTTGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTG > 1:1595212/4‑150 gtggGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGG < 1:2094823/146‑1 GAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGG > 2:2634276/1‑150 AGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGC < 2:2263107/150‑1 CGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCA > 2:334923/1‑150 CGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCA < 2:2793199/150‑1 GGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGC > 1:1532927/1‑150 CCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACA > 1:1479075/1‑150 CCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACA > 1:323974/1‑150 CGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACAC < 1:2401244/150‑1 CGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACAC < 1:2401230/150‑1 CGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACAC > 2:296206/1‑150 GAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAA > 2:2165470/1‑150 GGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC < 1:933431/150‑1 GGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC < 2:4133116/150‑1 GGTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGCCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3341250‑3341082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3341170‑3341318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |