| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5335151 | 196 (1.000) | 19 (0.100) | 7/264 | NT | 11.4% | intergenic (+13/‑230) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| ? | NC_002947 | = 5335237 | 108 (0.570) | intergenic (+99/‑144) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein | |||||
GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5334998‑5335151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCG < NC_002947/5335237‑5335089 GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACC > 2:2262860/1‑150GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACC > 1:467432/1‑150GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACC > 1:467260/1‑150GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACC > 2:3532213/1‑150GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACC > 2:3852089/1‑150 ACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGG < 1:3317145/150‑1 CTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGC < 1:1851383/150‑1 CTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGC < 1:3352674/150‑1 CTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGC < 2:2489508/150‑1 TGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCC > 1:1498172/1‑150 TGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCC > 1:1199677/1‑150 AGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGG < 1:1201140/126‑1 AGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGG > 2:1201140/1‑126 TGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGT < 2:2312302/150‑1 CTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTC < 1:1130227/150‑1 CAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 2:2888556/150‑1 CAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGT < 2:2888537/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 1:1692110/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 2:786216/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 1:1009626/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 2:2410840/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 2:873793/150‑1 AGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTG < 1:2604541/150‑1 GTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGG < 2:4209533/150‑1 GTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGG < 1:3347957/150‑1 TCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGTTTCCTGTGGG < 2:1042837/150‑1 TCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGG < 2:1042804/150‑1 CGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGA < 2:3230692/150‑1 CGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGA < 1:3348271/150‑1 CGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGC < 1:1541312/150‑1 GCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCCTTTCGCGGGCAGGCCCGCTCCCACCGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGG < 2:1488125/150‑1 GCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTGTGCCGGCCCTTGCGCGGGCATGCCCGCTCCCACCGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGG < 2:3274343/150‑1 ggcgGGCCCTTTCGCGGGCTGGCCCGCCCCCACAGGTAGCCCACAGGCCTTGACGGGGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATC < 1:2676078/146‑1 CGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGAAAGGTTCAGCGCAAATCAGCCACTGGCCCCGTGGTCCGCTGCGCGATCGCT > 1:2321075/1‑150 GCCCGTTCGCGGGCATGCCCGCTCCCACCGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTC < 2:1589061/150‑1 CCCTTTCGCGGGCATGCCCGCTCCCACAGGGAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCGGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCC > 2:2600516/1‑150 CCCTTGCGCGGGCCTGCCCGCTCCCACCGGTAGCCCACCGGCCTTGAAGGCGGCGTGGTTCCTGTGGGCGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCC < 1:3641706/150‑1 CCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCG < 2:3347270/150‑1 CCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCG > 2:2310083/1‑150 GCACTGCGGGCGCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5334998‑5335151‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTAAAGGTTCAGCGCAAATCAGCCTCTGGCACCGTGGTCCGCTGCGCGATCGCTTCCG < NC_002947/5335237‑5335089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |