| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5562719 | 159 (0.810) | 11 (0.060) | 10/250 | NT | 7.0% | intergenic (‑250/+52) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5562730 | 148 (0.830) | intergenic (‑261/+41) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase | |||||
TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5562558‑5562719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG < NC_002947/5562730‑5562582 tcgCAGCGCAGCCACCGTACCCGACACCCTCAACTTGCCTTGCGAGCTGACCTAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCGGGCTGCCTCATCATACACCCCTTTTCATTCAGGATG < 2:2585910/147‑1 CCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGC > 2:1222048/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGACATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 1:4031066/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 2:962692/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 2:89353/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 2:2507770/1‑150 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 2:1241722/1‑150 CAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCAC > 1:1601256/1‑150 GCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAATAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCC > 1:2730964/1‑150 CGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCC > 2:154994/1‑150 CGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCAAACACCCCTTTTCATTCAGGATGCACCCC > 1:2155440/1‑150 AGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCC > 2:3487306/1‑150 AGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCC > 2:2548023/1‑150 CACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCAC < 2:2690906/150‑1 AAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGTAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGG < 1:2155424/150‑1 AATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGTAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 1:1232708/150‑1 TGCGAGCTGACCAAACCGTCACCCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCC < 2:2607894/150‑1 TGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCCTACACCCCATTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCC < 2:1789603/150‑1 CCAACCCGTCAACCGGCGCTGAGCCAACCAACCTTGCAGACGCAAAACAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATGCA‑GCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAG < 1:2306890/150‑1 CTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGA > 2:4284744/1‑111 CTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGA < 1:4284744/111‑1 GGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGCCTCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTACCGGCTTTTTTGGGTCTGCAAGGGTGATTGGCT > 1:1350003/1‑150 CCCTTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCGGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTT > 1:137289/1‑150 TTTTCATTCAGGATGCACCCCGCCTGGTGCATTAGCTGCCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGG > 1:2510045/1‑150 CACCCCGCCTGGCAGCTAATGCACCCGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCA < 1:524279/150‑1 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTGCCGGCTTTTTTGCGTGTGCAAGGTTGATTGGGTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAA > 2:3427706/1‑150 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCACGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAA > 1:852591/1‑150 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAA > 1:852664/1‑150 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCGGCAAGGTTGATTGGCTCCGCGCCGGTTGACGGGTTGGTCAGCTCGCCAGGCAc > 1:2539873/1‑149 CCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTGTGCGTCTGCAAGGTTGATTGGCGCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAAT < 2:2973870/150‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT < 1:878591/150‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGGTGACGGGTTGGTCAGCTCGCACGGCAAgt > 1:1314983/1‑148 CGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCGTGTTTGAGTCTGCAAGGTTGCTTGGCGCAGCGCCGGTTGACGGTTTGGTCAGCTCGCCAGGCAAATTG > 2:1502575/1‑150 GCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAATGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGA < 1:757913/150‑1 GCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGA < 1:1038517/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 2:291289/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 1:4496067/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 2:71547/150‑1 CCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAG < 1:4484036/150‑1 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 1:205763/150‑1 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 2:1880715/150‑1 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTCGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 2:672238/150‑1 TGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGG > 1:4473136/1‑150 GCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTACCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG > 1:308722/1‑150 TCCCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5562558‑5562719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGGGTG < NC_002947/5562730‑5562582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |