New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6062424 = | 124 (0.630) | 14 (0.080) | 7/256 | NT | 11.3% | intergenic (+82/+99) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
? | NC_002947 | 6062481 = | 104 (0.570) | intergenic (+139/+42) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
GCTGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6062580‑6062424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA > NC_002947/6062481‑6062629 GCTGGTGATGTGGTTCCAGGGGTTGATGAAATACCTTAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTC < 2:2104327/150‑1 GCTGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTC < 2:1107111/150‑1 GCTGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTC < 1:2606835/150‑1 CTGGTGATGTGGTTCCTGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCTAAAAAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCG < 1:894973/150‑1 TGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAATGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGC > 2:1955868/1‑150 TGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGC > 2:3618279/1‑150 GGTGATGTGGTTCCAGGGTTTGATGAAATTCCTGAAACCAAAGATGAAAGGCTGAAGCCGTACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCG < 1:341271/150‑1 GGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAGGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCG < 1:1378914/150‑1 GGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCG < 2:1285585/150‑1 gttATGTGGTTCCTGGGGTTGAGGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGTTTGATGACGCTTTACCTTTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGG < 1:1628752/147‑1 GTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGG < 2:243757/150‑1 TGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGG < 2:4011275/150‑1 CTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAA > 2:3997553/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAA > 1:2731444/1‑150 CGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCAC > 2:3078684/1‑150 CGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCAC > 2:3078656/1‑150 CCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCA > 1:679819/1‑150 CCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCA > 1:679850/1‑150 CCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAC > 1:1609252/1‑150 CCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAC > 1:1609195/1‑150 CCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAC > 2:554974/1‑150 CCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAC > 1:68468/1‑150 CCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCGGTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAC > 2:2532382/1‑150 GAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGC > 2:388984/1‑150 AACAAGCGACGCGGTGCATGGCACCGGCTTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCC > 1:1451406/1‑150 AAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGG > 2:4216525/1‑150 GGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGA < 2:2731444/150‑1 TTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCC < 2:3153548/150‑1 TCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCC < 2:4007022/150‑1 TCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCC < 2:4007459/150‑1 TCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAG < 1:2251809/75‑1 TCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAG > 2:2251809/1‑75 CGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCT < 2:4088097/150‑1 GCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTT < 1:1771039/150‑1 CGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTG > 2:2254327/1‑150 GGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGC < 1:1816911/150‑1 GGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGC < 2:3199774/150‑1 GGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGC < 2:3199822/150‑1 GCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT < 1:823521/150‑1 GCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT < 1:682701/150‑1 CACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATG > 1:1673699/1‑150 ACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA > 1:1466655/1‑150 ACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA > 2:3196003/1‑150 ACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA > 2:1200723/1‑150 GCTGGTGATGTGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6062580‑6062424 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGA > NC_002947/6062481‑6062629 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |